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The map label for this gene is ymdC [H]

Identifier: 116690772

GI number: 116690772

Start: 3048465

End: 3050087

Strand: Reverse

Name: ymdC [H]

Synonym: Bcen2424_2752

Alternate gene names: 116690772

Gene position: 3050087-3048465 (Counterclockwise)

Preceding gene: 116690773

Following gene: 116690771

Centisome position: 87.55

GC content: 68.95

Gene sequence:

>1623_bases
GTGCTCACATCCTTGATCCGGCGCGCGCCGGCCGCGCTGTCGTGGCGCGCCGCATGCCGCCAGGCCCGCGCGCTGGTCGT
CTGCGCGCTGCTGCCGCTCGCCGCATGCGCGACGCATCCGCCCGCCACCTCGCTCGATCGCCCCGTCTCCCATGCGTTGT
CGGCGGAAACCGCCACGCCGCTGCGCGATGCGCTGGCCGCGCCGGAAGCCGCGCATCCCGGGCAGTCGGGCTTCCGGCTG
CTGGCCGACGGCGCCACCGCATTGCAGATGCGCATCGCGCTTGCGCGTGCGGCGACGAAGACGCTCGACATGCAGTACTA
CATCGCGACCGAGGACACGACCGGCAAGCTGCTGCTGGGCGCGGCGCTGTACGCGGCCGATCGCGGCGTGCGCGTGCGGA
TGCTGGTCGACGACCTGAACTTCCACGATATCGACCGCGTGATGGCCGCGCTGAATACGCACCAGAACATCGAGATCCGC
GTGTTCAACCCGTTCGGCGCGTCGCAGCGCGGCATGATGGAGCGCACGGCCAACTTCTTCACGCGGATCGACAGCTTCAC
GCGCCGGATGCACAACAAGGCGATGATCGCGGATAACCAGCTCGCGATCGTCGGCGGCCGCAATCTCGGCGACGAATACT
TCAGTGCGAGCCCGACGCTGCAGTTCCGCGATCTCGACGTGCTGGCGGCCGGCCCCGTGACGAGCGACATCTCGAAGAGC
TTCGACGACTACTGGGCGAGCGCGAGCAGCTACCCGTTGCGCGTGCTGAATCATCAGACGTTCGATCCGAAGGATCTCGA
CGCGATGCGCGACGAGCTGCGCGATCACTGGCGCAAGAACGCCGATCCGTACAACGCGAAACCGCTGAACGCGACGCCGC
TCGCCCGGCAGATCGCGCGCGACGAACTCGAACTCGTGTGGGCACCGGCCGAATTCAAGGTCGATGCGCCGGACAAGGTC
GCGCGGCCGACCGGCACGTACGTGAGCCCGCCGATGCAGCGCCTGGCCGAGCTGACGCGCGGCGCGCAGAAGGAATTCCT
GGCGTTTTCGCCGTACTTCGTGCCGCACGACGCCGGCGTGAAGATCCTCGGCGACACGGTCGCGCGCGGCGTGCGCGTCG
CGATCGTGACGAACTCGCTCGCGGCGACCGACGCGGTCGCGGTGCAGTCGGGCTATGCGCCGTATCGCGTGCCGCTGCTG
CAGCGCGGCGTCGAGCTGTACGAATTCAAGTCGCAGCCGGACCAGCAGCCCGCGCGGCTGTTCGGTTCGCGCTCGCGTGC
GAGCCTGCATGCGAAGGCGTACGTGATCGACCGGCAAATCCTCGTGATCGGCTCGCTGAACCTCGACCCGCGCTCCGCGC
ACCTGAACACCGAGCTCGCGCTCGTGATCCACAGCCCGGTGCTCGCGCAGCAGGCCGCGGCGATCTTCGCGCGCGTGACG
CAGCCGGACGAAAGCTACCGCGTCACGCTCGCGAAGCGGACCGACGGCGGTCCGCCCGCGCTCGAATGGACGGGCACCGA
AGGCGGTCAGACCGCCACCTATCACGTCGACCCGCATGCGGGGCTGCTGCGCAACGTGATGACGGGCATCTTCACGCTGC
TGCCGGTCGACGACCAGCTGTAA

Upstream 100 bases:

>100_bases
ACCCGCTCGTCGGGCGCCCACTAGAATCGTCCGGAACCGCCTGTCAGCCGCGCGCCGCGGCCATGATGTGCCCATTGATC
CGACTGTCGAGGAAGCTTCC

Downstream 100 bases:

>100_bases
GGGCACGAACGGCTCCGGCAAAACCCGCGATACCGGTGCGCGGGGAAAGGTGATATGGTTGTGCGCGCAACTATAAGCGA
ATCGAGAAGAGGCGCTGCCG

Product: phospholipase D/transphosphatidylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 540; Mature: 540

Protein sequence:

>540_residues
MLTSLIRRAPAALSWRAACRQARALVVCALLPLAACATHPPATSLDRPVSHALSAETATPLRDALAAPEAAHPGQSGFRL
LADGATALQMRIALARAATKTLDMQYYIATEDTTGKLLLGAALYAADRGVRVRMLVDDLNFHDIDRVMAALNTHQNIEIR
VFNPFGASQRGMMERTANFFTRIDSFTRRMHNKAMIADNQLAIVGGRNLGDEYFSASPTLQFRDLDVLAAGPVTSDISKS
FDDYWASASSYPLRVLNHQTFDPKDLDAMRDELRDHWRKNADPYNAKPLNATPLARQIARDELELVWAPAEFKVDAPDKV
ARPTGTYVSPPMQRLAELTRGAQKEFLAFSPYFVPHDAGVKILGDTVARGVRVAIVTNSLAATDAVAVQSGYAPYRVPLL
QRGVELYEFKSQPDQQPARLFGSRSRASLHAKAYVIDRQILVIGSLNLDPRSAHLNTELALVIHSPVLAQQAAAIFARVT
QPDESYRVTLAKRTDGGPPALEWTGTEGGQTATYHVDPHAGLLRNVMTGIFTLLPVDDQL

Sequences:

>Translated_540_residues
MLTSLIRRAPAALSWRAACRQARALVVCALLPLAACATHPPATSLDRPVSHALSAETATPLRDALAAPEAAHPGQSGFRL
LADGATALQMRIALARAATKTLDMQYYIATEDTTGKLLLGAALYAADRGVRVRMLVDDLNFHDIDRVMAALNTHQNIEIR
VFNPFGASQRGMMERTANFFTRIDSFTRRMHNKAMIADNQLAIVGGRNLGDEYFSASPTLQFRDLDVLAAGPVTSDISKS
FDDYWASASSYPLRVLNHQTFDPKDLDAMRDELRDHWRKNADPYNAKPLNATPLARQIARDELELVWAPAEFKVDAPDKV
ARPTGTYVSPPMQRLAELTRGAQKEFLAFSPYFVPHDAGVKILGDTVARGVRVAIVTNSLAATDAVAVQSGYAPYRVPLL
QRGVELYEFKSQPDQQPARLFGSRSRASLHAKAYVIDRQILVIGSLNLDPRSAHLNTELALVIHSPVLAQQAAAIFARVT
QPDESYRVTLAKRTDGGPPALEWTGTEGGQTATYHVDPHAGLLRNVMTGIFTLLPVDDQL
>Mature_540_residues
MLTSLIRRAPAALSWRAACRQARALVVCALLPLAACATHPPATSLDRPVSHALSAETATPLRDALAAPEAAHPGQSGFRL
LADGATALQMRIALARAATKTLDMQYYIATEDTTGKLLLGAALYAADRGVRVRMLVDDLNFHDIDRVMAALNTHQNIEIR
VFNPFGASQRGMMERTANFFTRIDSFTRRMHNKAMIADNQLAIVGGRNLGDEYFSASPTLQFRDLDVLAAGPVTSDISKS
FDDYWASASSYPLRVLNHQTFDPKDLDAMRDELRDHWRKNADPYNAKPLNATPLARQIARDELELVWAPAEFKVDAPDKV
ARPTGTYVSPPMQRLAELTRGAQKEFLAFSPYFVPHDAGVKILGDTVARGVRVAIVTNSLAATDAVAVQSGYAPYRVPLL
QRGVELYEFKSQPDQQPARLFGSRSRASLHAKAYVIDRQILVIGSLNLDPRSAHLNTELALVIHSPVLAQQAAAIFARVT
QPDESYRVTLAKRTDGGPPALEWTGTEGGQTATYHVDPHAGLLRNVMTGIFTLLPVDDQL

Specific function: Unknown

COG id: COG1502

COG function: function code I; Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 PLD phosphodiesterase domains [H]

Homologues:

Organism=Escherichia coli, GI87081826, Length=473, Percent_Identity=37.4207188160677, Blast_Score=271, Evalue=8e-74,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001736 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 59106; Mature: 59106

Theoretical pI: Translated: 8.43; Mature: 8.43

Prosite motif: PS50035 PLD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTSLIRRAPAALSWRAACRQARALVVCALLPLAACATHPPATSLDRPVSHALSAETATP
CHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCH
LRDALAAPEAAHPGQSGFRLLADGATALQMRIALARAATKTLDMQYYIATEDTTGKLLLG
HHHHHCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHEEEEEEEEECCCCCCCHHH
AALYAADRGVRVRMLVDDLNFHDIDRVMAALNTHQNIEIRVFNPFGASQRGMMERTANFF
HHHHHCCCCCEEEEEEECCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHH
TRIDSFTRRMHNKAMIADNQLAIVGGRNLGDEYFSASPTLQFRDLDVLAAGPVTSDISKS
HHHHHHHHHHCCCEEEECCCEEEEECCCCCHHHHCCCCCEEEECCEEEECCCCCHHHHHH
FDDYWASASSYPLRVLNHQTFDPKDLDAMRDELRDHWRKNADPYNAKPLNATPLARQIAR
HHHHHCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHH
DELELVWAPAEFKVDAPDKVARPTGTYVSPPMQRLAELTRGAQKEFLAFSPYFVPHDAGV
CCEEEEEECCCEEECCCHHHCCCCCCCCCCHHHHHHHHHCCCHHHHEEECCEECCCCCCC
KILGDTVARGVRVAIVTNSLAATDAVAVQSGYAPYRVPLLQRGVELYEFKSQPDQQPARL
EEECHHHHCCEEEEEEECCHHHHHHHHHHCCCCCEECHHHHCCCHHHHHCCCCCCCHHHH
FGSRSRASLHAKAYVIDRQILVIGSLNLDPRSAHLNTELALVIHSPVLAQQAAAIFARVT
HCCCCCCCEEEEEEEEEEEEEEEEECCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHCC
QPDESYRVTLAKRTDGGPPALEWTGTEGGQTATYHVDPHAGLLRNVMTGIFTLLPVDDQL
CCCCCEEEEEEEECCCCCCCEEECCCCCCCEEEEEECCCHHHHHHHHHHHHEEECCCCCC
>Mature Secondary Structure
MLTSLIRRAPAALSWRAACRQARALVVCALLPLAACATHPPATSLDRPVSHALSAETATP
CHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCH
LRDALAAPEAAHPGQSGFRLLADGATALQMRIALARAATKTLDMQYYIATEDTTGKLLLG
HHHHHCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHEEEEEEEEECCCCCCCHHH
AALYAADRGVRVRMLVDDLNFHDIDRVMAALNTHQNIEIRVFNPFGASQRGMMERTANFF
HHHHHCCCCCEEEEEEECCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHH
TRIDSFTRRMHNKAMIADNQLAIVGGRNLGDEYFSASPTLQFRDLDVLAAGPVTSDISKS
HHHHHHHHHHCCCEEEECCCEEEEECCCCCHHHHCCCCCEEEECCEEEECCCCCHHHHHH
FDDYWASASSYPLRVLNHQTFDPKDLDAMRDELRDHWRKNADPYNAKPLNATPLARQIAR
HHHHHCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHH
DELELVWAPAEFKVDAPDKVARPTGTYVSPPMQRLAELTRGAQKEFLAFSPYFVPHDAGV
CCEEEEEECCCEEECCCHHHCCCCCCCCCCHHHHHHHHHCCCHHHHEEECCEECCCCCCC
KILGDTVARGVRVAIVTNSLAATDAVAVQSGYAPYRVPLLQRGVELYEFKSQPDQQPARL
EEECHHHHCCEEEEEEECCHHHHHHHHHHCCCCCEECHHHHCCCHHHHHCCCCCCCHHHH
FGSRSRASLHAKAYVIDRQILVIGSLNLDPRSAHLNTELALVIHSPVLAQQAAAIFARVT
HCCCCCCCEEEEEEEEEEEEEEEEECCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHCC
QPDESYRVTLAKRTDGGPPALEWTGTEGGQTATYHVDPHAGLLRNVMTGIFTLLPVDDQL
CCCCCEEEEEEEECCCCCCCEEECCCCCCCEEEEEECCCHHHHHHHHHHHHEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]