| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116690770
Identifier: 116690770
GI number: 116690770
Start: 3046405
End: 3047406
Strand: Direct
Name: 116690770
Synonym: Bcen2424_2750
Alternate gene names: NA
Gene position: 3046405-3047406 (Clockwise)
Preceding gene: 116690769
Following gene: 116690780
Centisome position: 87.44
GC content: 68.96
Gene sequence:
>1002_bases ATGCCCTGCCCGACCCGCCCCGTCCGTGTCCGTCCGCTGCTGGCGGGTCTCTGCTCCGTCGCCGCCCTTTACGGCGCGCC CGCCGACGCGCAGGAGTTCTCGCTGTTCACCGGCCCGCTGTGGGGCGGCGGGCAACGCACGTATTCGTGGGCGTTCGATT ACCAGGAAGGCTTGAGCCCGCATACCGCGCTCGGCTTCACGTGGTACAACGAAGGGCATATTCCGAATCACCACCGCGAC GGCCAGGCGGTGCAGTTCTGGGGCCGCGTGCCGCTCGAGAACCGCCGCCTGGTGCTGTCGGCCGGCGCGGGCCCGTATCG CTACTTCGACACGGTGCCGGCCGCCGAAGGCCGCGGGTATTCGAATACGCATGGCTGGGGCGTACTGATGAGCGTGCGCG CCGCGTACTACACGTCGCACCGCTGGATCGCGCAGCTTCAGGTCAACCGCGCGCACGTGTTCAGCGGGCCCGACACGACA TCGGTGATGTTCGGTGTCGGCTACCAGCTCGATGCGCCCGACACGCCGGGCCCGCGCGACACCGCGCTGCCGCGCACCCG CAAGGTCACGCACAACGAAGTCACCGCGATGCTCGGCGAGACGATTCTGAACAGCCGCTCGTCGCCGTCGACGCTCGGCG GCAGCCTCGAATACCGGCGCGGCCTCACGCGTTCGATCGACTGGACCGCGACGTGGATGTACGAAGGCGCGAAGCAGGCG GTCCGCCGCAACGGCATCGCGTCCCAGCTGTGGCTCACGCGCGCGTTCCTGAACGACAAGGTCACGCTGTCGGCCGGCGC CGGCGCGTACTTCACCGTCAACCAGCGCAACCGCGACGGCCAGCCGGGGCCGGGTGACGGCCGCCTCTCCGGCATCGTGT CGATCTCGGCCAGTTACCGGATTTCCGACCGCTGGCTCACACGTATCACGTGGAACCGCGTGGTCACGCGCTACGACCGC GATACCGATGTGATCCAGGCCGGTGTCGGCTACCGGTTCTAG
Upstream 100 bases:
>100_bases ACGTTATTGCGCCAACCCGGGTCGACACGTGTTTTCCTGCGCAGGAAAATGCTCGCGTGTTGTCGTGACTGGAAAGTGAA CCGTGCCGGCCCGTCCCCCG
Downstream 100 bases:
>100_bases TCGGGCGCACTCATCGGGCGCGCCGCCCGCGTCACGCGCGGTAGCCCGGATCGATCCGGTCGACGATACGCTGCAGCGCG TCGAACGCGTCCTGTCCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 333; Mature: 332
Protein sequence:
>333_residues MPCPTRPVRVRPLLAGLCSVAALYGAPADAQEFSLFTGPLWGGGQRTYSWAFDYQEGLSPHTALGFTWYNEGHIPNHHRD GQAVQFWGRVPLENRRLVLSAGAGPYRYFDTVPAAEGRGYSNTHGWGVLMSVRAAYYTSHRWIAQLQVNRAHVFSGPDTT SVMFGVGYQLDAPDTPGPRDTALPRTRKVTHNEVTAMLGETILNSRSSPSTLGGSLEYRRGLTRSIDWTATWMYEGAKQA VRRNGIASQLWLTRAFLNDKVTLSAGAGAYFTVNQRNRDGQPGPGDGRLSGIVSISASYRISDRWLTRITWNRVVTRYDR DTDVIQAGVGYRF
Sequences:
>Translated_333_residues MPCPTRPVRVRPLLAGLCSVAALYGAPADAQEFSLFTGPLWGGGQRTYSWAFDYQEGLSPHTALGFTWYNEGHIPNHHRD GQAVQFWGRVPLENRRLVLSAGAGPYRYFDTVPAAEGRGYSNTHGWGVLMSVRAAYYTSHRWIAQLQVNRAHVFSGPDTT SVMFGVGYQLDAPDTPGPRDTALPRTRKVTHNEVTAMLGETILNSRSSPSTLGGSLEYRRGLTRSIDWTATWMYEGAKQA VRRNGIASQLWLTRAFLNDKVTLSAGAGAYFTVNQRNRDGQPGPGDGRLSGIVSISASYRISDRWLTRITWNRVVTRYDR DTDVIQAGVGYRF >Mature_332_residues PCPTRPVRVRPLLAGLCSVAALYGAPADAQEFSLFTGPLWGGGQRTYSWAFDYQEGLSPHTALGFTWYNEGHIPNHHRDG QAVQFWGRVPLENRRLVLSAGAGPYRYFDTVPAAEGRGYSNTHGWGVLMSVRAAYYTSHRWIAQLQVNRAHVFSGPDTTS VMFGVGYQLDAPDTPGPRDTALPRTRKVTHNEVTAMLGETILNSRSSPSTLGGSLEYRRGLTRSIDWTATWMYEGAKQAV RRNGIASQLWLTRAFLNDKVTLSAGAGAYFTVNQRNRDGQPGPGDGRLSGIVSISASYRISDRWLTRITWNRVVTRYDRD TDVIQAGVGYRF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36951; Mature: 36820
Theoretical pI: Translated: 10.05; Mature: 10.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPCPTRPVRVRPLLAGLCSVAALYGAPADAQEFSLFTGPLWGGGQRTYSWAFDYQEGLSP CCCCCCCEEHHHHHHHHHHHHHHHCCCCCCHHCEEEECCCCCCCCEEEEEEECHHHCCCC HTALGFTWYNEGHIPNHHRDGQAVQFWGRVPLENRRLVLSAGAGPYRYFDTVPAAEGRGY CCEEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCEEEEEECCCCCCHHCCCCCCCCCCC SNTHGWGVLMSVRAAYYTSHRWIAQLQVNRAHVFSGPDTTSVMFGVGYQLDAPDTPGPRD CCCCCHHHHHHHHHHHHHCCEEEEEEEECCEEEECCCCCCEEEEECCEEECCCCCCCCCC TALPRTRKVTHNEVTAMLGETILNSRSSPSTLGGSLEYRRGLTRSIDWTATWMYEGAKQA CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCCCCEEEEEEHHHHHHH VRRNGIASQLWLTRAFLNDKVTLSAGAGAYFTVNQRNRDGQPGPGDGRLSGIVSISASYR HHHCCCHHHHHHHHHHHCCCEEEEECCCEEEEEECCCCCCCCCCCCCCEEEEEEEEEEEE ISDRWLTRITWNRVVTRYDRDTDVIQAGVGYRF ECCHHEEEEEHHHHHHHCCCCHHHEECCCCCCC >Mature Secondary Structure PCPTRPVRVRPLLAGLCSVAALYGAPADAQEFSLFTGPLWGGGQRTYSWAFDYQEGLSP CCCCCCEEHHHHHHHHHHHHHHHCCCCCCHHCEEEECCCCCCCCEEEEEEECHHHCCCC HTALGFTWYNEGHIPNHHRDGQAVQFWGRVPLENRRLVLSAGAGPYRYFDTVPAAEGRGY CCEEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCEEEEEECCCCCCHHCCCCCCCCCCC SNTHGWGVLMSVRAAYYTSHRWIAQLQVNRAHVFSGPDTTSVMFGVGYQLDAPDTPGPRD CCCCCHHHHHHHHHHHHHCCEEEEEEEECCEEEECCCCCCEEEEECCEEECCCCCCCCCC TALPRTRKVTHNEVTAMLGETILNSRSSPSTLGGSLEYRRGLTRSIDWTATWMYEGAKQA CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCCCCEEEEEEHHHHHHH VRRNGIASQLWLTRAFLNDKVTLSAGAGAYFTVNQRNRDGQPGPGDGRLSGIVSISASYR HHHCCCHHHHHHHHHHHCCCEEEEECCCEEEEEECCCCCCCCCCCCCCEEEEEEEEEEEE ISDRWLTRITWNRVVTRYDRDTDVIQAGVGYRF ECCHHEEEEEHHHHHHHCCCCHHHEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA