| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is lnt [H]
Identifier: 116690719
GI number: 116690719
Start: 2987720
End: 2989423
Strand: Direct
Name: lnt [H]
Synonym: Bcen2424_2699
Alternate gene names: 116690719
Gene position: 2987720-2989423 (Clockwise)
Preceding gene: 116690718
Following gene: 116690721
Centisome position: 85.76
GC content: 69.95
Gene sequence:
>1704_bases ATGGACGATCCGATCCCGTCCCGCCCGGCTGGCGGCCTTCTCGCGCCGGCGCCCGGCCGCGCGCTGCCGCGCTGGCACTA TCCGGCCGCGCTGCTCGCCGGCGCGGCCAATACGCTCAGCTTCGCGCCCACGCCGCATGGCGGTTGGCTGCAACTCGTCG TATTCGTCTGGTTTTTCGCACAGCTGACGCGCACGTCGAGCTGGCGCGGCGCCGCGCTCACCGGCGGCGCGTTCGGCTTA GGCAACTTCATCACCGGCGTCTGGTGGCTCTACATCAGCATGCACGTGTACGGCGAGATGGCCGCGCCGCTCGCGGGCGG CGCGCTCGTGCTGTTCTCGCTGTACCTGTCGCTGTACCCGGCGTTCTCGGCCGGGCTGTGGTCGTTCTGCGCGGGCCATG CGTGGCACCGCCGCGAGCCCGACCCGCGGCCGTTCTCGCCGACCTGGCACGGCGCGTTTGCATTCGCGAGCGCGTGGGCG CTCGGCGAATGGCTGCGCGGCACCGTGTTCACCGGCTTTCCGTGGCTCGGCAGCGGCTACCCGCAGGTCGACGGCCCGTT CGCGGGCTTTGCGCCGGTCGTCGGCGTGTACGGGATCGCGTGGGTGCTCGCGCTGTTCGCCGCGCTGGTCGTGCAGGCGC TCGCCGCCGCGCGCCCGTCGCCGGGGCGTGACGGCGGCGCCGCCGCACCGAGCGGCAACGCCCGCGTGCGCATCGCCGCG CCGGCCGCCATCGCCGTCGCGCTGGTCGCGGCCGGCGTCGGGCTGTCGCAGGTCACGTGGACCGTGCCTGCCAACGCCCC GCTCACCGTGCGGCTGCTGCAGGGCAACGTGAAGCAGGACATCAAGTTCGAGCAGGAAGGCATCGACGCGGCGATCAAGA TGTACCAGCAGATGATCGTCGAGAAGCCGGCCGACCTGATCGTCACGCCCGAGACCGCGATCGCGGTGATGATCCAGGAG CTGCCCGAGCCGTTCGCCGTCGCGATCCGCAAGTTCAGCGACACGACCGGTTCGGCCGTGCTGTTCGGCGCGGTCGGCGC GTCGGTGACCGAGGACGGCCACTACGTCGACTACACGAACAGCCTGTACGGCGTGACGCCGAATTCGCGCGACATCTATC ACTACGACAAGCATCACCTCGTGCCCTTCGGCGAATTCATCCCGTGGGGCTTCCGGTGGTTCGTCAACCTGATGAAGATG CCGCTCGGCGACTTCGCGCGCGGCGCGCCGGTGCAGAAGCCGTTCCTCGTGCACAACCAGCCGGTGATGGCCGATATCTG CTACGAGGACTTGTTCGGCGAGGAAATCGCCGCGACGATCCGCGACAACCCGCAGCCGCCGGGCGTGCTCGTCAACGTGA CGAACCTCGCGTGGTTCGGCGACACGATCGCGCTCGACCAGCACCTGCAGATCGCGCGGATGCGCTCGCTCGAAACGGGC CGGCCGATGCTGCGCTCGACCAACACCGGGATGACAGCCGCGATCGACGCGCACGGGCGCGTGCTCGGCCAGTTGAAGCC GTTCACGATCGGCTCGCTCGACGTGCGGATCGAAGGCACGAGCGGCTTCACGCCGTACGTGACGAGCGGCAACAACATCG TGCTCGCGGTGTCGCTGGTGCTGCTCGCGTTCGGCTTCACGTTCGGGCCTGGGCTGCGCCGGCGCAATGGCCGGAAGCAG CACGGCGGCGACGCAGCGAAATGA
Upstream 100 bases:
>100_bases CGCAACCCGCTCGCCAGCCGTCGCGCCGAAACCTCGCACGAAGACTGACCGCTCCGCGCCAGCCGCGCCTCCTTCAACCG CTCGCCCTCTTCCGCTTCAC
Downstream 100 bases:
>100_bases CGCAGCGGGCCGCCGCCGCGCGCGGCGGCCCGTGACCGCGAACCGGCCGGCCGCTCAGGCCTGCCGGTCCGATTGGTCCA GTTAGTCCAGTTGGCCCAGT
Product: apolipoprotein N-acyltransferase
Products: NA
Alternate protein names: ALP N-acyltransferase [H]
Number of amino acids: Translated: 567; Mature: 567
Protein sequence:
>567_residues MDDPIPSRPAGGLLAPAPGRALPRWHYPAALLAGAANTLSFAPTPHGGWLQLVVFVWFFAQLTRTSSWRGAALTGGAFGL GNFITGVWWLYISMHVYGEMAAPLAGGALVLFSLYLSLYPAFSAGLWSFCAGHAWHRREPDPRPFSPTWHGAFAFASAWA LGEWLRGTVFTGFPWLGSGYPQVDGPFAGFAPVVGVYGIAWVLALFAALVVQALAAARPSPGRDGGAAAPSGNARVRIAA PAAIAVALVAAGVGLSQVTWTVPANAPLTVRLLQGNVKQDIKFEQEGIDAAIKMYQQMIVEKPADLIVTPETAIAVMIQE LPEPFAVAIRKFSDTTGSAVLFGAVGASVTEDGHYVDYTNSLYGVTPNSRDIYHYDKHHLVPFGEFIPWGFRWFVNLMKM PLGDFARGAPVQKPFLVHNQPVMADICYEDLFGEEIAATIRDNPQPPGVLVNVTNLAWFGDTIALDQHLQIARMRSLETG RPMLRSTNTGMTAAIDAHGRVLGQLKPFTIGSLDVRIEGTSGFTPYVTSGNNIVLAVSLVLLAFGFTFGPGLRRRNGRKQ HGGDAAK
Sequences:
>Translated_567_residues MDDPIPSRPAGGLLAPAPGRALPRWHYPAALLAGAANTLSFAPTPHGGWLQLVVFVWFFAQLTRTSSWRGAALTGGAFGL GNFITGVWWLYISMHVYGEMAAPLAGGALVLFSLYLSLYPAFSAGLWSFCAGHAWHRREPDPRPFSPTWHGAFAFASAWA LGEWLRGTVFTGFPWLGSGYPQVDGPFAGFAPVVGVYGIAWVLALFAALVVQALAAARPSPGRDGGAAAPSGNARVRIAA PAAIAVALVAAGVGLSQVTWTVPANAPLTVRLLQGNVKQDIKFEQEGIDAAIKMYQQMIVEKPADLIVTPETAIAVMIQE LPEPFAVAIRKFSDTTGSAVLFGAVGASVTEDGHYVDYTNSLYGVTPNSRDIYHYDKHHLVPFGEFIPWGFRWFVNLMKM PLGDFARGAPVQKPFLVHNQPVMADICYEDLFGEEIAATIRDNPQPPGVLVNVTNLAWFGDTIALDQHLQIARMRSLETG RPMLRSTNTGMTAAIDAHGRVLGQLKPFTIGSLDVRIEGTSGFTPYVTSGNNIVLAVSLVLLAFGFTFGPGLRRRNGRKQ HGGDAAK >Mature_567_residues MDDPIPSRPAGGLLAPAPGRALPRWHYPAALLAGAANTLSFAPTPHGGWLQLVVFVWFFAQLTRTSSWRGAALTGGAFGL GNFITGVWWLYISMHVYGEMAAPLAGGALVLFSLYLSLYPAFSAGLWSFCAGHAWHRREPDPRPFSPTWHGAFAFASAWA LGEWLRGTVFTGFPWLGSGYPQVDGPFAGFAPVVGVYGIAWVLALFAALVVQALAAARPSPGRDGGAAAPSGNARVRIAA PAAIAVALVAAGVGLSQVTWTVPANAPLTVRLLQGNVKQDIKFEQEGIDAAIKMYQQMIVEKPADLIVTPETAIAVMIQE LPEPFAVAIRKFSDTTGSAVLFGAVGASVTEDGHYVDYTNSLYGVTPNSRDIYHYDKHHLVPFGEFIPWGFRWFVNLMKM PLGDFARGAPVQKPFLVHNQPVMADICYEDLFGEEIAATIRDNPQPPGVLVNVTNLAWFGDTIALDQHLQIARMRSLETG RPMLRSTNTGMTAAIDAHGRVLGQLKPFTIGSLDVRIEGTSGFTPYVTSGNNIVLAVSLVLLAFGFTFGPGLRRRNGRKQ HGGDAAK
Specific function: Transfers the fatty acyl group on membrane lipoproteins [H]
COG id: COG0815
COG function: function code M; Apolipoprotein N-acyltransferase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 CN hydrolase domain [H]
Homologues:
Organism=Escherichia coli, GI1786878, Length=512, Percent_Identity=32.6171875, Blast_Score=240, Evalue=2e-64,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004563 - InterPro: IPR003010 [H]
Pfam domain/function: PF00795 CN_hydrolase [H]
EC number: 2.3.1.- [C]
Molecular weight: Translated: 60863; Mature: 60863
Theoretical pI: Translated: 8.59; Mature: 8.59
Prosite motif: PS50263 CN_HYDROLASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDDPIPSRPAGGLLAPAPGRALPRWHYPAALLAGAANTLSFAPTPHGGWLQLVVFVWFFA CCCCCCCCCCCCEECCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHH QLTRTSSWRGAALTGGAFGLGNFITGVWWLYISMHVYGEMAAPLAGGALVLFSLYLSLYP HHHHCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH AFSAGLWSFCAGHAWHRREPDPRPFSPTWHGAFAFASAWALGEWLRGTVFTGFPWLGSGY HHHHHHHHHHHCCCHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCEEECCCCCCCCC PQVDGPFAGFAPVVGVYGIAWVLALFAALVVQALAAARPSPGRDGGAAAPSGNARVRIAA CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEC PAAIAVALVAAGVGLSQVTWTVPANAPLTVRLLQGNVKQDIKFEQEGIDAAIKMYQQMIV HHHHHHHHHHHCCCHHHEEEEECCCCCEEEEEECCCCHHCCCHHHHHHHHHHHHHHHHHH EKPADLIVTPETAIAVMIQELPEPFAVAIRKFSDTTGSAVLFGAVGASVTEDGHYVDYTN CCCCCEEECCHHHHHHHHHHCCCHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCEEEECC SLYGVTPNSRDIYHYDKHHLVPFGEFIPWGFRWFVNLMKMPLGDFARGAPVQKPFLVHNQ CEEECCCCCCCCEEECCCCCCCCHHHCCHHHHHHHHHHHCCCCHHHCCCCCCCCEEECCC PVMADICYEDLFGEEIAATIRDNPQPPGVLVNVTNLAWFGDTIALDQHLQIARMRSLETG CHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECEEEEECCHHHHHHHHHHHHHHHCCCC RPMLRSTNTGMTAAIDAHGRVLGQLKPFTIGSLDVRIEGTSGFTPYVTSGNNIVLAVSLV CCHHHCCCCCCEEEEECCCHHHHCCCCEEECEEEEEEECCCCCCCEEECCCCEEHHHHHH LLAFGFTFGPGLRRRNGRKQHGGDAAK HHHHHHHCCCCHHHCCCCCCCCCCCCC >Mature Secondary Structure MDDPIPSRPAGGLLAPAPGRALPRWHYPAALLAGAANTLSFAPTPHGGWLQLVVFVWFFA CCCCCCCCCCCCEECCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHH QLTRTSSWRGAALTGGAFGLGNFITGVWWLYISMHVYGEMAAPLAGGALVLFSLYLSLYP HHHHCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH AFSAGLWSFCAGHAWHRREPDPRPFSPTWHGAFAFASAWALGEWLRGTVFTGFPWLGSGY HHHHHHHHHHHCCCHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCEEECCCCCCCCC PQVDGPFAGFAPVVGVYGIAWVLALFAALVVQALAAARPSPGRDGGAAAPSGNARVRIAA CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEC PAAIAVALVAAGVGLSQVTWTVPANAPLTVRLLQGNVKQDIKFEQEGIDAAIKMYQQMIV HHHHHHHHHHHCCCHHHEEEEECCCCCEEEEEECCCCHHCCCHHHHHHHHHHHHHHHHHH EKPADLIVTPETAIAVMIQELPEPFAVAIRKFSDTTGSAVLFGAVGASVTEDGHYVDYTN CCCCCEEECCHHHHHHHHHHCCCHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCEEEECC SLYGVTPNSRDIYHYDKHHLVPFGEFIPWGFRWFVNLMKMPLGDFARGAPVQKPFLVHNQ CEEECCCCCCCCEEECCCCCCCCHHHCCHHHHHHHHHHHCCCCHHHCCCCCCCCEEECCC PVMADICYEDLFGEEIAATIRDNPQPPGVLVNVTNLAWFGDTIALDQHLQIARMRSLETG CHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECEEEEECCHHHHHHHHHHHHHHHCCCC RPMLRSTNTGMTAAIDAHGRVLGQLKPFTIGSLDVRIEGTSGFTPYVTSGNNIVLAVSLV CCHHHCCCCCCEEEEECCCHHHHCCCCEEECEEEEEEECCCCCCCEEECCCCEEHHHHHH LLAFGFTFGPGLRRRNGRKQHGGDAAK HHHHHHHCCCCHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Transferases; Acyltransferases; Transferring groups other than amino-acyl groups [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11823852 [H]