Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

Click here to switch to the map view.

The map label for this gene is lnt [H]

Identifier: 116690719

GI number: 116690719

Start: 2987720

End: 2989423

Strand: Direct

Name: lnt [H]

Synonym: Bcen2424_2699

Alternate gene names: 116690719

Gene position: 2987720-2989423 (Clockwise)

Preceding gene: 116690718

Following gene: 116690721

Centisome position: 85.76

GC content: 69.95

Gene sequence:

>1704_bases
ATGGACGATCCGATCCCGTCCCGCCCGGCTGGCGGCCTTCTCGCGCCGGCGCCCGGCCGCGCGCTGCCGCGCTGGCACTA
TCCGGCCGCGCTGCTCGCCGGCGCGGCCAATACGCTCAGCTTCGCGCCCACGCCGCATGGCGGTTGGCTGCAACTCGTCG
TATTCGTCTGGTTTTTCGCACAGCTGACGCGCACGTCGAGCTGGCGCGGCGCCGCGCTCACCGGCGGCGCGTTCGGCTTA
GGCAACTTCATCACCGGCGTCTGGTGGCTCTACATCAGCATGCACGTGTACGGCGAGATGGCCGCGCCGCTCGCGGGCGG
CGCGCTCGTGCTGTTCTCGCTGTACCTGTCGCTGTACCCGGCGTTCTCGGCCGGGCTGTGGTCGTTCTGCGCGGGCCATG
CGTGGCACCGCCGCGAGCCCGACCCGCGGCCGTTCTCGCCGACCTGGCACGGCGCGTTTGCATTCGCGAGCGCGTGGGCG
CTCGGCGAATGGCTGCGCGGCACCGTGTTCACCGGCTTTCCGTGGCTCGGCAGCGGCTACCCGCAGGTCGACGGCCCGTT
CGCGGGCTTTGCGCCGGTCGTCGGCGTGTACGGGATCGCGTGGGTGCTCGCGCTGTTCGCCGCGCTGGTCGTGCAGGCGC
TCGCCGCCGCGCGCCCGTCGCCGGGGCGTGACGGCGGCGCCGCCGCACCGAGCGGCAACGCCCGCGTGCGCATCGCCGCG
CCGGCCGCCATCGCCGTCGCGCTGGTCGCGGCCGGCGTCGGGCTGTCGCAGGTCACGTGGACCGTGCCTGCCAACGCCCC
GCTCACCGTGCGGCTGCTGCAGGGCAACGTGAAGCAGGACATCAAGTTCGAGCAGGAAGGCATCGACGCGGCGATCAAGA
TGTACCAGCAGATGATCGTCGAGAAGCCGGCCGACCTGATCGTCACGCCCGAGACCGCGATCGCGGTGATGATCCAGGAG
CTGCCCGAGCCGTTCGCCGTCGCGATCCGCAAGTTCAGCGACACGACCGGTTCGGCCGTGCTGTTCGGCGCGGTCGGCGC
GTCGGTGACCGAGGACGGCCACTACGTCGACTACACGAACAGCCTGTACGGCGTGACGCCGAATTCGCGCGACATCTATC
ACTACGACAAGCATCACCTCGTGCCCTTCGGCGAATTCATCCCGTGGGGCTTCCGGTGGTTCGTCAACCTGATGAAGATG
CCGCTCGGCGACTTCGCGCGCGGCGCGCCGGTGCAGAAGCCGTTCCTCGTGCACAACCAGCCGGTGATGGCCGATATCTG
CTACGAGGACTTGTTCGGCGAGGAAATCGCCGCGACGATCCGCGACAACCCGCAGCCGCCGGGCGTGCTCGTCAACGTGA
CGAACCTCGCGTGGTTCGGCGACACGATCGCGCTCGACCAGCACCTGCAGATCGCGCGGATGCGCTCGCTCGAAACGGGC
CGGCCGATGCTGCGCTCGACCAACACCGGGATGACAGCCGCGATCGACGCGCACGGGCGCGTGCTCGGCCAGTTGAAGCC
GTTCACGATCGGCTCGCTCGACGTGCGGATCGAAGGCACGAGCGGCTTCACGCCGTACGTGACGAGCGGCAACAACATCG
TGCTCGCGGTGTCGCTGGTGCTGCTCGCGTTCGGCTTCACGTTCGGGCCTGGGCTGCGCCGGCGCAATGGCCGGAAGCAG
CACGGCGGCGACGCAGCGAAATGA

Upstream 100 bases:

>100_bases
CGCAACCCGCTCGCCAGCCGTCGCGCCGAAACCTCGCACGAAGACTGACCGCTCCGCGCCAGCCGCGCCTCCTTCAACCG
CTCGCCCTCTTCCGCTTCAC

Downstream 100 bases:

>100_bases
CGCAGCGGGCCGCCGCCGCGCGCGGCGGCCCGTGACCGCGAACCGGCCGGCCGCTCAGGCCTGCCGGTCCGATTGGTCCA
GTTAGTCCAGTTGGCCCAGT

Product: apolipoprotein N-acyltransferase

Products: NA

Alternate protein names: ALP N-acyltransferase [H]

Number of amino acids: Translated: 567; Mature: 567

Protein sequence:

>567_residues
MDDPIPSRPAGGLLAPAPGRALPRWHYPAALLAGAANTLSFAPTPHGGWLQLVVFVWFFAQLTRTSSWRGAALTGGAFGL
GNFITGVWWLYISMHVYGEMAAPLAGGALVLFSLYLSLYPAFSAGLWSFCAGHAWHRREPDPRPFSPTWHGAFAFASAWA
LGEWLRGTVFTGFPWLGSGYPQVDGPFAGFAPVVGVYGIAWVLALFAALVVQALAAARPSPGRDGGAAAPSGNARVRIAA
PAAIAVALVAAGVGLSQVTWTVPANAPLTVRLLQGNVKQDIKFEQEGIDAAIKMYQQMIVEKPADLIVTPETAIAVMIQE
LPEPFAVAIRKFSDTTGSAVLFGAVGASVTEDGHYVDYTNSLYGVTPNSRDIYHYDKHHLVPFGEFIPWGFRWFVNLMKM
PLGDFARGAPVQKPFLVHNQPVMADICYEDLFGEEIAATIRDNPQPPGVLVNVTNLAWFGDTIALDQHLQIARMRSLETG
RPMLRSTNTGMTAAIDAHGRVLGQLKPFTIGSLDVRIEGTSGFTPYVTSGNNIVLAVSLVLLAFGFTFGPGLRRRNGRKQ
HGGDAAK

Sequences:

>Translated_567_residues
MDDPIPSRPAGGLLAPAPGRALPRWHYPAALLAGAANTLSFAPTPHGGWLQLVVFVWFFAQLTRTSSWRGAALTGGAFGL
GNFITGVWWLYISMHVYGEMAAPLAGGALVLFSLYLSLYPAFSAGLWSFCAGHAWHRREPDPRPFSPTWHGAFAFASAWA
LGEWLRGTVFTGFPWLGSGYPQVDGPFAGFAPVVGVYGIAWVLALFAALVVQALAAARPSPGRDGGAAAPSGNARVRIAA
PAAIAVALVAAGVGLSQVTWTVPANAPLTVRLLQGNVKQDIKFEQEGIDAAIKMYQQMIVEKPADLIVTPETAIAVMIQE
LPEPFAVAIRKFSDTTGSAVLFGAVGASVTEDGHYVDYTNSLYGVTPNSRDIYHYDKHHLVPFGEFIPWGFRWFVNLMKM
PLGDFARGAPVQKPFLVHNQPVMADICYEDLFGEEIAATIRDNPQPPGVLVNVTNLAWFGDTIALDQHLQIARMRSLETG
RPMLRSTNTGMTAAIDAHGRVLGQLKPFTIGSLDVRIEGTSGFTPYVTSGNNIVLAVSLVLLAFGFTFGPGLRRRNGRKQ
HGGDAAK
>Mature_567_residues
MDDPIPSRPAGGLLAPAPGRALPRWHYPAALLAGAANTLSFAPTPHGGWLQLVVFVWFFAQLTRTSSWRGAALTGGAFGL
GNFITGVWWLYISMHVYGEMAAPLAGGALVLFSLYLSLYPAFSAGLWSFCAGHAWHRREPDPRPFSPTWHGAFAFASAWA
LGEWLRGTVFTGFPWLGSGYPQVDGPFAGFAPVVGVYGIAWVLALFAALVVQALAAARPSPGRDGGAAAPSGNARVRIAA
PAAIAVALVAAGVGLSQVTWTVPANAPLTVRLLQGNVKQDIKFEQEGIDAAIKMYQQMIVEKPADLIVTPETAIAVMIQE
LPEPFAVAIRKFSDTTGSAVLFGAVGASVTEDGHYVDYTNSLYGVTPNSRDIYHYDKHHLVPFGEFIPWGFRWFVNLMKM
PLGDFARGAPVQKPFLVHNQPVMADICYEDLFGEEIAATIRDNPQPPGVLVNVTNLAWFGDTIALDQHLQIARMRSLETG
RPMLRSTNTGMTAAIDAHGRVLGQLKPFTIGSLDVRIEGTSGFTPYVTSGNNIVLAVSLVLLAFGFTFGPGLRRRNGRKQ
HGGDAAK

Specific function: Transfers the fatty acyl group on membrane lipoproteins [H]

COG id: COG0815

COG function: function code M; Apolipoprotein N-acyltransferase

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 CN hydrolase domain [H]

Homologues:

Organism=Escherichia coli, GI1786878, Length=512, Percent_Identity=32.6171875, Blast_Score=240, Evalue=2e-64,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004563
- InterPro:   IPR003010 [H]

Pfam domain/function: PF00795 CN_hydrolase [H]

EC number: 2.3.1.- [C]

Molecular weight: Translated: 60863; Mature: 60863

Theoretical pI: Translated: 8.59; Mature: 8.59

Prosite motif: PS50263 CN_HYDROLASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDDPIPSRPAGGLLAPAPGRALPRWHYPAALLAGAANTLSFAPTPHGGWLQLVVFVWFFA
CCCCCCCCCCCCEECCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHH
QLTRTSSWRGAALTGGAFGLGNFITGVWWLYISMHVYGEMAAPLAGGALVLFSLYLSLYP
HHHHCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
AFSAGLWSFCAGHAWHRREPDPRPFSPTWHGAFAFASAWALGEWLRGTVFTGFPWLGSGY
HHHHHHHHHHHCCCHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCEEECCCCCCCCC
PQVDGPFAGFAPVVGVYGIAWVLALFAALVVQALAAARPSPGRDGGAAAPSGNARVRIAA
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEC
PAAIAVALVAAGVGLSQVTWTVPANAPLTVRLLQGNVKQDIKFEQEGIDAAIKMYQQMIV
HHHHHHHHHHHCCCHHHEEEEECCCCCEEEEEECCCCHHCCCHHHHHHHHHHHHHHHHHH
EKPADLIVTPETAIAVMIQELPEPFAVAIRKFSDTTGSAVLFGAVGASVTEDGHYVDYTN
CCCCCEEECCHHHHHHHHHHCCCHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCEEEECC
SLYGVTPNSRDIYHYDKHHLVPFGEFIPWGFRWFVNLMKMPLGDFARGAPVQKPFLVHNQ
CEEECCCCCCCCEEECCCCCCCCHHHCCHHHHHHHHHHHCCCCHHHCCCCCCCCEEECCC
PVMADICYEDLFGEEIAATIRDNPQPPGVLVNVTNLAWFGDTIALDQHLQIARMRSLETG
CHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECEEEEECCHHHHHHHHHHHHHHHCCCC
RPMLRSTNTGMTAAIDAHGRVLGQLKPFTIGSLDVRIEGTSGFTPYVTSGNNIVLAVSLV
CCHHHCCCCCCEEEEECCCHHHHCCCCEEECEEEEEEECCCCCCCEEECCCCEEHHHHHH
LLAFGFTFGPGLRRRNGRKQHGGDAAK
HHHHHHHCCCCHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MDDPIPSRPAGGLLAPAPGRALPRWHYPAALLAGAANTLSFAPTPHGGWLQLVVFVWFFA
CCCCCCCCCCCCEECCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHH
QLTRTSSWRGAALTGGAFGLGNFITGVWWLYISMHVYGEMAAPLAGGALVLFSLYLSLYP
HHHHCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
AFSAGLWSFCAGHAWHRREPDPRPFSPTWHGAFAFASAWALGEWLRGTVFTGFPWLGSGY
HHHHHHHHHHHCCCHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCEEECCCCCCCCC
PQVDGPFAGFAPVVGVYGIAWVLALFAALVVQALAAARPSPGRDGGAAAPSGNARVRIAA
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEC
PAAIAVALVAAGVGLSQVTWTVPANAPLTVRLLQGNVKQDIKFEQEGIDAAIKMYQQMIV
HHHHHHHHHHHCCCHHHEEEEECCCCCEEEEEECCCCHHCCCHHHHHHHHHHHHHHHHHH
EKPADLIVTPETAIAVMIQELPEPFAVAIRKFSDTTGSAVLFGAVGASVTEDGHYVDYTN
CCCCCEEECCHHHHHHHHHHCCCHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCEEEECC
SLYGVTPNSRDIYHYDKHHLVPFGEFIPWGFRWFVNLMKMPLGDFARGAPVQKPFLVHNQ
CEEECCCCCCCCEEECCCCCCCCHHHCCHHHHHHHHHHHCCCCHHHCCCCCCCCEEECCC
PVMADICYEDLFGEEIAATIRDNPQPPGVLVNVTNLAWFGDTIALDQHLQIARMRSLETG
CHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECEEEEECCHHHHHHHHHHHHHHHCCCC
RPMLRSTNTGMTAAIDAHGRVLGQLKPFTIGSLDVRIEGTSGFTPYVTSGNNIVLAVSLV
CCHHHCCCCCCEEEEECCCHHHHCCCCEEECEEEEEEECCCCCCCEEECCCCEEHHHHHH
LLAFGFTFGPGLRRRNGRKQHGGDAAK
HHHHHHHCCCCHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Transferases; Acyltransferases; Transferring groups other than amino-acyl groups [C]

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11823852 [H]