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The map label for this gene is cc4 [H]

Identifier: 116690688

GI number: 116690688

Start: 2956593

End: 2957357

Strand: Direct

Name: cc4 [H]

Synonym: Bcen2424_2668

Alternate gene names: 116690688

Gene position: 2956593-2957357 (Clockwise)

Preceding gene: 116690686

Following gene: 116690689

Centisome position: 84.86

GC content: 69.54

Gene sequence:

>765_bases
ATGGAGTCTCGTGTGTCTTCAAGACGCCTCTTCCGTCCGCTGCTCGCCGTTCTGATGATCGGCGGCGCGGGCCTTATGAG
CGCTGCCCAAGCGCAGACCAAGCCCACGGAGCAAGCGCACGCCCAGCAGGCGCCGCTCAAGGCACCCGATACCATGGCCG
AGCGCGTGCGCGGCTGTACCGCATGTCACGGCGTCCACGGCCAGGGCACGGACAACGACTATTTCCCGCGGCTTGCCGGC
AAGCCGGCCGAGTACCTGTACAACCAGCTCGTCAACTTCCGTGACGGCCGGCGCAAGTACCCGCCGATGAACTATCTGCT
GACGTACCTGAACGACGACTACCTGCGCGAAATCGCCGAGCACTTCTCGGCCGAACGTCCGCCGTACCCGACGCCGGCGA
AGTCGACGCTGCCGGCCGCGACGCTCGCACGCGGCAAGCAGCTCGTCACGCAGGGCGACCCGGCCCGCAAGCTGCCCGCC
TGCGTGGCCTGCCACGGCGCGGGCCTGACCGGCATGCAGCCGGCGATCCCGGGCCTCGTCGGCCTGCACGCCGATTACCT
GAGCGCGCAGCTCGGCGCATGGCGCTCGGGCAACCGCCACGCGAAGGCGCCCGACTGCATGCACGACATCGCCGCGAAGC
TTTCCGACGAAGACGTGACGGCCGTGACCGCATGGCTCGCCGCGCAACCGGCGCCCGCCAACCCCGTGCCGGCCCCGGCG
CGTTCGATGAAGACTCCGCTCGCCTGCGGCAGCGAACCGCAATAA

Upstream 100 bases:

>100_bases
TACCCATCGATGATAGAATGCCGCGTCGCAGCAGCCCGGCTGTCCTGCCGTCCATGCGCCGAGCCGATCGTAGCCCGGAC
AAGGTCCCCGACGAATAAAC

Downstream 100 bases:

>100_bases
GGCAAGGGAGACAGACACAATGAAACGCAAGTCCCTGTTTGCACTCTCGGCCGTCGCGATCGTCGCGGCTGCCGCCCTCG
TGCCGGTCCTGTGGCCGGGC

Product: cytochrome c, class I

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 254; Mature: 254

Protein sequence:

>254_residues
MESRVSSRRLFRPLLAVLMIGGAGLMSAAQAQTKPTEQAHAQQAPLKAPDTMAERVRGCTACHGVHGQGTDNDYFPRLAG
KPAEYLYNQLVNFRDGRRKYPPMNYLLTYLNDDYLREIAEHFSAERPPYPTPAKSTLPAATLARGKQLVTQGDPARKLPA
CVACHGAGLTGMQPAIPGLVGLHADYLSAQLGAWRSGNRHAKAPDCMHDIAAKLSDEDVTAVTAWLAAQPAPANPVPAPA
RSMKTPLACGSEPQ

Sequences:

>Translated_254_residues
MESRVSSRRLFRPLLAVLMIGGAGLMSAAQAQTKPTEQAHAQQAPLKAPDTMAERVRGCTACHGVHGQGTDNDYFPRLAG
KPAEYLYNQLVNFRDGRRKYPPMNYLLTYLNDDYLREIAEHFSAERPPYPTPAKSTLPAATLARGKQLVTQGDPARKLPA
CVACHGAGLTGMQPAIPGLVGLHADYLSAQLGAWRSGNRHAKAPDCMHDIAAKLSDEDVTAVTAWLAAQPAPANPVPAPA
RSMKTPLACGSEPQ
>Mature_254_residues
MESRVSSRRLFRPLLAVLMIGGAGLMSAAQAQTKPTEQAHAQQAPLKAPDTMAERVRGCTACHGVHGQGTDNDYFPRLAG
KPAEYLYNQLVNFRDGRRKYPPMNYLLTYLNDDYLREIAEHFSAERPPYPTPAKSTLPAATLARGKQLVTQGDPARKLPA
CVACHGAGLTGMQPAIPGLVGLHADYLSAQLGAWRSGNRHAKAPDCMHDIAAKLSDEDVTAVTAWLAAQPAPANPVPAPA
RSMKTPLACGSEPQ

Specific function: Diheme, high potential cytochrome c believed to be an intermediate electron donor to terminal oxidation systems [H]

COG id: COG2863

COG function: function code C; Cytochrome c553

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 27258; Mature: 27258

Theoretical pI: Translated: 8.98; Mature: 8.98

Prosite motif: PS51007 CYTC L=RR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHCCCCCCCCCCC
>Mature Secondary Structure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HHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]