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The map label for this gene is yieP [H]

Identifier: 116690685

GI number: 116690685

Start: 2953154

End: 2953732

Strand: Reverse

Name: yieP [H]

Synonym: Bcen2424_2665

Alternate gene names: 116690685

Gene position: 2953732-2953154 (Counterclockwise)

Preceding gene: 116690687

Following gene: 116690683

Centisome position: 84.78

GC content: 70.12

Gene sequence:

>579_bases
ATGGAGATGTACGGCGTAAGCCGCACGGTGATGCGCGAGGCGCTGCGCACGCTGACGTCGAAGGGGCTGGTCGAATCGCG
GCCGAAGGTCGGCACGCGCGTGCGGCCGCGCCGGGCGTGGAACCTGCTCGATGCCGACCTGCTCGACTGGTATGCGCGTG
TCGCGCCGCCGCTCGCATTCGCGCTGAAGCTGCAGGAGATGCGCGAGATGATCGAGCCGCACGCGGCCGCGCTGGCCGCG
CGAACCCATACGCCCGAAGCATTCGACGCGATCGACGGCGCGGTGCGCGCGATGGCCGCCGCGCGCAACGTCGACGAATG
GGTGCGCGCCGATCTGCACTTTCACCTGAGCGTGCTGGAGGCCGGTGGCAACGAGCTGCTGGTGCCGCTCGGCGCGCTGA
TCGATCGCACGCTCGAGGCGCAACTGCAGTTGAATGCGCGCCGGGCGGACGTGTACAACGCGTCGCTTGCCGAGCATACG
GCCGTCAGCGACGCGATTCGCGTGCGCGACGAGAACGGCGCTCGCCGCGCGATGGCGACGCTGCTGGCGGTGACGCGTGC
CCGGATCGAGATGTCGTGA

Upstream 100 bases:

>100_bases
TCAACGCGACCTGCATGGACAGACGGCCTTCCGGCTCGCGACGGCGATCCTGCGCGGCGACTATCCGCCCGAATCGCTGC
TGCCGAGGGAACCCGACCTG

Downstream 100 bases:

>100_bases
CGGAAGCGGGCACGCGGCGCCGGTGCCGGCGCCGTGCCGTCAGGCGTTCGCGCAGCCGCCCGGCTTGTGGATCCGTTCCG
TCGACGGCGGGTACTTCGCG

Product: GntR domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 192; Mature: 192

Protein sequence:

>192_residues
MEMYGVSRTVMREALRTLTSKGLVESRPKVGTRVRPRRAWNLLDADLLDWYARVAPPLAFALKLQEMREMIEPHAAALAA
RTHTPEAFDAIDGAVRAMAAARNVDEWVRADLHFHLSVLEAGGNELLVPLGALIDRTLEAQLQLNARRADVYNASLAEHT
AVSDAIRVRDENGARRAMATLLAVTRARIEMS

Sequences:

>Translated_192_residues
MEMYGVSRTVMREALRTLTSKGLVESRPKVGTRVRPRRAWNLLDADLLDWYARVAPPLAFALKLQEMREMIEPHAAALAA
RTHTPEAFDAIDGAVRAMAAARNVDEWVRADLHFHLSVLEAGGNELLVPLGALIDRTLEAQLQLNARRADVYNASLAEHT
AVSDAIRVRDENGARRAMATLLAVTRARIEMS
>Mature_192_residues
MEMYGVSRTVMREALRTLTSKGLVESRPKVGTRVRPRRAWNLLDADLLDWYARVAPPLAFALKLQEMREMIEPHAAALAA
RTHTPEAFDAIDGAVRAMAAARNVDEWVRADLHFHLSVLEAGGNELLVPLGALIDRTLEAQLQLNARRADVYNASLAEHT
AVSDAIRVRDENGARRAMATLLAVTRARIEMS

Specific function: Unknown

COG id: COG2186

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH gntR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI48994961, Length=184, Percent_Identity=33.1521739130435, Blast_Score=96, Evalue=2e-21,
Organism=Escherichia coli, GI48994955, Length=194, Percent_Identity=32.4742268041237, Blast_Score=80, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011711
- InterPro:   IPR000524
- InterPro:   IPR011991 [H]

Pfam domain/function: PF07729 FCD; PF00392 GntR [H]

EC number: NA

Molecular weight: Translated: 21305; Mature: 21305

Theoretical pI: Translated: 9.02; Mature: 9.02

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEMYGVSRTVMREALRTLTSKGLVESRPKVGTRVRPRRAWNLLDADLLDWYARVAPPLAF
CCCCCHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHH
ALKLQEMREMIEPHAAALAARTHTPEAFDAIDGAVRAMAAARNVDEWVRADLHFHLSVLE
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHEEE
AGGNELLVPLGALIDRTLEAQLQLNARRADVYNASLAEHTAVSDAIRVRDENGARRAMAT
CCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
LLAVTRARIEMS
HHHHHHHHHCCC
>Mature Secondary Structure
MEMYGVSRTVMREALRTLTSKGLVESRPKVGTRVRPRRAWNLLDADLLDWYARVAPPLAF
CCCCCHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHH
ALKLQEMREMIEPHAAALAARTHTPEAFDAIDGAVRAMAAARNVDEWVRADLHFHLSVLE
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHEEE
AGGNELLVPLGALIDRTLEAQLQLNARRADVYNASLAEHTAVSDAIRVRDENGARRAMAT
CCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
LLAVTRARIEMS
HHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7686882; 9278503 [H]