| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116690684
Identifier: 116690684
GI number: 116690684
Start: 2952869
End: 2953114
Strand: Direct
Name: 116690684
Synonym: Bcen2424_2664
Alternate gene names: NA
Gene position: 2952869-2953114 (Clockwise)
Preceding gene: 116690682
Following gene: 116690686
Centisome position: 84.76
GC content: 68.29
Gene sequence:
>246_bases ATGCTCGAACTGCGCCCCGGCTGCGAATGCTGCGACAAGGACCTGCCGCCCGATTCGGAGGAAGCACGCATCTGTACGTT TGAATGTACGTTTTGCGCGACTTGCGCGGACGACGTGCTGAAGGGCCGCTGCCCGAACTGCGGCGGCGACCTGGTCGCGC GCCCGCGGCGACCGGCGAGCCTGCTCGCGAAGTACCCGCCGTCGACGGAACGGATCCACAAGCCGGGCGGCTGCGCGAAC GCCTGA
Upstream 100 bases:
>100_bases ACACCGTTGGCCGGGCCGATCCAAACGCGTACAGTAGCGCTCGCATGCGTCGCCCGCAATGTCCGGACGGCGCCATCCCT CACCGACCCAGGAGACCGTC
Downstream 100 bases:
>100_bases CGGCACGGCGCCGGCACCGGCGCCGCGTGCCCGCTTCCGTCACGACATCTCGATCCGGGCACGCGTCACCGCCAGCAGCG TCGCCATCGCGCGGCGAGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 81; Mature: 81
Protein sequence:
>81_residues MLELRPGCECCDKDLPPDSEEARICTFECTFCATCADDVLKGRCPNCGGDLVARPRRPASLLAKYPPSTERIHKPGGCAN A
Sequences:
>Translated_81_residues MLELRPGCECCDKDLPPDSEEARICTFECTFCATCADDVLKGRCPNCGGDLVARPRRPASLLAKYPPSTERIHKPGGCAN A >Mature_81_residues MLELRPGCECCDKDLPPDSEEARICTFECTFCATCADDVLKGRCPNCGGDLVARPRRPASLLAKYPPSTERIHKPGGCAN A
Specific function: Unknown
COG id: COG3813
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010696 - InterPro: IPR013083 [H]
Pfam domain/function: PF06906 DUF1272 [H]
EC number: NA
Molecular weight: Translated: 8742; Mature: 8742
Theoretical pI: Translated: 5.82; Mature: 5.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
12.3 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 13.6 %Cys+Met (Translated Protein) 12.3 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 13.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLELRPGCECCDKDLPPDSEEARICTFECTFCATCADDVLKGRCPNCGGDLVARPRRPAS CCCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHH LLAKYPPSTERIHKPGGCANA HHCCCCCCCCCEECCCCCCCC >Mature Secondary Structure MLELRPGCECCDKDLPPDSEEARICTFECTFCATCADDVLKGRCPNCGGDLVARPRRPAS CCCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHH LLAKYPPSTERIHKPGGCANA HHCCCCCCCCCEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8121412; 11481430 [H]