| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is yheT [H]
Identifier: 116690655
GI number: 116690655
Start: 2917993
End: 2919030
Strand: Direct
Name: yheT [H]
Synonym: Bcen2424_2635
Alternate gene names: 116690655
Gene position: 2917993-2919030 (Clockwise)
Preceding gene: 116690654
Following gene: 116690656
Centisome position: 83.76
GC content: 70.81
Gene sequence:
>1038_bases ATGAGTACGGCTTCTCCGCCCACCTCGCCGCTGACCGGGCCCCCGGCCCCCGACGACGATTCATTGCGCTATCGCGCACC GCGCTGGCTGCCCAACAGCCATGTGCAAACCATCGTGCCCGCGCTGTTCGCGCGGCGGCCGGTCGTCGGTTATCGGCGAG AGCGATGGGAAACGCCCGACCACGACTTCATCGACCTCGACTGGGTCGCGCACCTCGACAGCGCGGCGCCGGCGCCCGAC GCGCCGCTGTTCGTGCTGTTCCACGGCCTCGAAGGCAGCTCCGGCTCGCACTACGCGCTCGCGATGATGGCCACCGCGCG CGCGAACGGGTGGCACGCCGTCGTGCCGCACTTCCGCAGTTGCAGCGGCGAGATCAACCGCCAGCCGCGCTTCTACCATC TCGCCGACAGCGCCGAGGTCGACTGGATCCTGCGCCGGCTCGCCGCACAGCATCGCGGGCCGCTGGTCGTGGCCGGCGTA TCGCTCGGCGGCAACGTGCTGCTGCGCTGGCTCGGCGAGCATCGCAGCGACACGTCGATCGTGCGCGCCGCCGCCGCGAT CTCCACGCCGATCGACGTGCACGCGGGCGGCCGCGCGCTGTCGCAGGGGTTCGCGATGGTCTACACGCGCAGCTTCCTGA AGACGCTCAAGCGCAAGGGGCTCGCGAAACTCGAACAGTACCCGGGGCTGTTCGACCGCGACGCGATGCTGCGGGCCGTG ACGATGCGCGACTTCGACGAGGTCGTGACCGCGCCGCTGCACGGTTTCGCGAACGCCGACGACTACTGGACGAAGGCAAC CACGCGGCCGCTGCTGCGCGCGATCGACGTACCCACGCTGATCCTCAACGCCCGCAACGACCCGTTCCTGCCCGAGTCGG CGCTGCCGGGCCCGGCCGACGTGTCGCCGGCCGTCGAGCTCGACCAGCCCGCGCACGGCGGCCACGCGGGCTTCATGACC GGGCCGTTCCCCGGCCGCCTCGACTGGCTGTCGGCGCGGGTGTTCGGCTATTGCTCGAAATTCGTCGACCATGGATGA
Upstream 100 bases:
>100_bases GATTCCTGAACAAGCGGCCGGACAATTCGCCGCGAAGATCCGTCACGGGCAGGGTCCGCTGCACTGACGAAGAACGAAGC AACGCATTAGCGGGGCGATC
Downstream 100 bases:
>100_bases CATCGTCAGGCAGGCGCTCGCCAAATGGCCGAACGTGCCGGATTGCACCGGCTGGCTGCTGCTCGACCGGCGCGGCACAT GGCGGCTGCGCGACGACGCC
Product: alpha/beta hydrolase fold
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 345; Mature: 344
Protein sequence:
>345_residues MSTASPPTSPLTGPPAPDDDSLRYRAPRWLPNSHVQTIVPALFARRPVVGYRRERWETPDHDFIDLDWVAHLDSAAPAPD APLFVLFHGLEGSSGSHYALAMMATARANGWHAVVPHFRSCSGEINRQPRFYHLADSAEVDWILRRLAAQHRGPLVVAGV SLGGNVLLRWLGEHRSDTSIVRAAAAISTPIDVHAGGRALSQGFAMVYTRSFLKTLKRKGLAKLEQYPGLFDRDAMLRAV TMRDFDEVVTAPLHGFANADDYWTKATTRPLLRAIDVPTLILNARNDPFLPESALPGPADVSPAVELDQPAHGGHAGFMT GPFPGRLDWLSARVFGYCSKFVDHG
Sequences:
>Translated_345_residues MSTASPPTSPLTGPPAPDDDSLRYRAPRWLPNSHVQTIVPALFARRPVVGYRRERWETPDHDFIDLDWVAHLDSAAPAPD APLFVLFHGLEGSSGSHYALAMMATARANGWHAVVPHFRSCSGEINRQPRFYHLADSAEVDWILRRLAAQHRGPLVVAGV SLGGNVLLRWLGEHRSDTSIVRAAAAISTPIDVHAGGRALSQGFAMVYTRSFLKTLKRKGLAKLEQYPGLFDRDAMLRAV TMRDFDEVVTAPLHGFANADDYWTKATTRPLLRAIDVPTLILNARNDPFLPESALPGPADVSPAVELDQPAHGGHAGFMT GPFPGRLDWLSARVFGYCSKFVDHG >Mature_344_residues STASPPTSPLTGPPAPDDDSLRYRAPRWLPNSHVQTIVPALFARRPVVGYRRERWETPDHDFIDLDWVAHLDSAAPAPDA PLFVLFHGLEGSSGSHYALAMMATARANGWHAVVPHFRSCSGEINRQPRFYHLADSAEVDWILRRLAAQHRGPLVVAGVS LGGNVLLRWLGEHRSDTSIVRAAAAISTPIDVHAGGRALSQGFAMVYTRSFLKTLKRKGLAKLEQYPGLFDRDAMLRAVT MRDFDEVVTAPLHGFANADDYWTKATTRPLLRAIDVPTLILNARNDPFLPESALPGPADVSPAVELDQPAHGGHAGFMTG PFPGRLDWLSARVFGYCSKFVDHG
Specific function: Unknown
COG id: COG0429
COG function: function code R; Predicted hydrolase of the alpha/beta-hydrolase fold
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AB hydrolase superfamily. AB hydrolase 4 family [H]
Homologues:
Organism=Homo sapiens, GI23397663, Length=328, Percent_Identity=30.1829268292683, Blast_Score=148, Evalue=9e-36, Organism=Homo sapiens, GI194578891, Length=330, Percent_Identity=29.6969696969697, Blast_Score=137, Evalue=2e-32, Organism=Homo sapiens, GI23397659, Length=280, Percent_Identity=25.3571428571429, Blast_Score=86, Evalue=5e-17, Organism=Homo sapiens, GI23397661, Length=280, Percent_Identity=25.3571428571429, Blast_Score=86, Evalue=5e-17, Organism=Escherichia coli, GI1789752, Length=319, Percent_Identity=38.2445141065831, Blast_Score=218, Evalue=7e-58, Organism=Caenorhabditis elegans, GI17566110, Length=312, Percent_Identity=27.2435897435897, Blast_Score=110, Evalue=1e-24, Organism=Caenorhabditis elegans, GI71985405, Length=308, Percent_Identity=26.9480519480519, Blast_Score=102, Evalue=3e-22, Organism=Saccharomyces cerevisiae, GI6323866, Length=247, Percent_Identity=23.8866396761134, Blast_Score=86, Evalue=8e-18, Organism=Saccharomyces cerevisiae, GI6319655, Length=290, Percent_Identity=26.8965517241379, Blast_Score=82, Evalue=1e-16, Organism=Saccharomyces cerevisiae, GI6325162, Length=291, Percent_Identity=27.1477663230241, Blast_Score=72, Evalue=9e-14, Organism=Drosophila melanogaster, GI24652003, Length=319, Percent_Identity=29.7805642633229, Blast_Score=130, Evalue=1e-30, Organism=Drosophila melanogaster, GI281398151, Length=319, Percent_Identity=29.7805642633229, Blast_Score=130, Evalue=2e-30, Organism=Drosophila melanogaster, GI24581365, Length=331, Percent_Identity=23.8670694864048, Blast_Score=72, Evalue=4e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012020 - InterPro: IPR000073 - InterPro: IPR000952 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: NA
Molecular weight: Translated: 37830; Mature: 37699
Theoretical pI: Translated: 7.88; Mature: 7.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTASPPTSPLTGPPAPDDDSLRYRAPRWLPNSHVQTIVPALFARRPVVGYRRERWETPD CCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHCCCCC HDFIDLDWVAHLDSAAPAPDAPLFVLFHGLEGSSGSHYALAMMATARANGWHAVVPHFRS CCEEEHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCEEEEEEEHHCCCCCEEECCCHHC CSGEINRQPRFYHLADSAEVDWILRRLAAQHRGPLVVAGVSLGGNVLLRWLGEHRSDTSI CCCCCCCCCCEEEECCCCCHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHCCCCCHHH VRAAAAISTPIDVHAGGRALSQGFAMVYTRSFLKTLKRKGLAKLEQYPGLFDRDAMLRAV HHHHHHHCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH TMRDFDEVVTAPLHGFANADDYWTKATTRPLLRAIDVPTLILNARNDPFLPESALPGPAD HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCC VSPAVELDQPAHGGHAGFMTGPFPGRLDWLSARVFGYCSKFVDHG CCCCEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure STASPPTSPLTGPPAPDDDSLRYRAPRWLPNSHVQTIVPALFARRPVVGYRRERWETPD CCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHCCCCC HDFIDLDWVAHLDSAAPAPDAPLFVLFHGLEGSSGSHYALAMMATARANGWHAVVPHFRS CCEEEHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCEEEEEEEHHCCCCCEEECCCHHC CSGEINRQPRFYHLADSAEVDWILRRLAAQHRGPLVVAGVSLGGNVLLRWLGEHRSDTSI CCCCCCCCCCEEEECCCCCHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHCCCCCHHH VRAAAAISTPIDVHAGGRALSQGFAMVYTRSFLKTLKRKGLAKLEQYPGLFDRDAMLRAV HHHHHHHCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH TMRDFDEVVTAPLHGFANADDYWTKATTRPLLRAIDVPTLILNARNDPFLPESALPGPAD HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCC VSPAVELDQPAHGGHAGFMTGPFPGRLDWLSARVFGYCSKFVDHG CCCCEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]