| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is purK [H]
Identifier: 116690643
GI number: 116690643
Start: 2906243
End: 2907439
Strand: Reverse
Name: purK [H]
Synonym: Bcen2424_2623
Alternate gene names: 116690643
Gene position: 2907439-2906243 (Counterclockwise)
Preceding gene: 116690644
Following gene: 116690642
Centisome position: 83.45
GC content: 71.6
Gene sequence:
>1197_bases ATGACCGCAACTCCTGATTCCGTTTCCCCGATCCTGCCCGGCGCGTGGCTGGGCATGGTCGGCGGCGGCCAGCTCGGCCG CATGTTCTGCTTTGCCGCCCAGTCGATGGGCTATCGCGTCGCCGTGCTCGATCCCGATCCGGCGAGCCCCGCCGGCGCGG TCGCCGATCGGCACCTGCGCGCGGCGTACGACGACGAAGCCGCGCTTGCCGAACTGGCCGACCTGTGCGAGGCCGTATCG ACGGAGTTCGAGAACGTGCCGGCCGCGAGCCTCGATTTCCTCGCGCGCACGACGTTCGTCGCCCCGGCTGGCCGCTGCGT CGCGGTCGCGCAGGACCGGATCGCGGAGAAGCGTTTCATCGAGGCGTCGGGCGTGCCGGTCGCGCCGCACGTCGTGATCG AATCGGCGGCGGCGCTTGCCGCGCTCGACGATGCGGCGCTTGACGCGGTGCTGCCGGGCATCCTGAAGACGGCCCGCCTC GGTTACGACGGCAAGGGCCAGGTGCGCGTCGCCACCGCGCAGGAAGCACGCGACGCGCATGCCGCGCTCGGCGGCGTGCC GTGCGTGCTGGAGAAGCGCCTGCCGCTGAAATACGAAGTGTCGGCGCTGATCGCGCGCGGCGCGGACGGCCGCTCGGCTG CGTTCCCGCTCGCGCAGAACGTGCACCACAACGGCATCCTCGCGCTGACGGTCGTACCGGCGCCGGCCGCCGATGCGGCC CGCGTCGAGGAAGCGCAGCAGGCGGCGATCCGGATCGCCGATACGCTCGGCTACGTCGGCGTGCTGTGCGTCGAGTTCTT CGTGCTGGAGGACGGCTCGTTCGTCGCGAACGAAATGGCGCCGCGCCCGCACAACTCCGGCCACTACACGGTCGATGCGT GCGCAACGAGCCAGTTCGAGCAGCAGGTGCGCGCGATGACGCGCATGCCGCTCGGCAATCCGCGCCAGCATTCGCCGGCC GCGATGCTGAACATCCTCGGCGACGTGTGGTTCCCCAACGGGGCGGCGGCTGACGCCGTCACGCCGCCGTGGGACACGGT CGCCGCGATGCCGGCTGCCCACCTGCACCTGTACGGCAAGGAAGAAGCGCGCGTCGGCCGCAAGATGGGCCACGTGAACT TCACGGCCGAGACGCGCGACGAAGCCGTCGCGGCGGCCACCGCATGCGCGCAGCTGCTGCGCGTGCCGCTCGACTGA
Upstream 100 bases:
>100_bases GCTGGAATGACGGCATGGCGCGCGGCCGCACGACGCGGCCGGCGCCGGATTTTCCCACTGCGGCGGGCCGTTCCGCGTTC CGCCGCAACCGACCACTGAC
Downstream 100 bases:
>100_bases GGCGCGGGCCGATGTCCATCGATCTCCCGACGCACGTGACGCCCGCGCAAATCGACGCGGCCGCCGCGCTGCTCGATGCG GGCCAGCTCGTCGCGTTTCC
Product: phosphoribosylaminoimidazole carboxylase ATPase subunit
Products: NA
Alternate protein names: N5-CAIR synthase; 5-(carboxyamino)imidazole ribonucleotide synthetase [H]
Number of amino acids: Translated: 398; Mature: 397
Protein sequence:
>398_residues MTATPDSVSPILPGAWLGMVGGGQLGRMFCFAAQSMGYRVAVLDPDPASPAGAVADRHLRAAYDDEAALAELADLCEAVS TEFENVPAASLDFLARTTFVAPAGRCVAVAQDRIAEKRFIEASGVPVAPHVVIESAAALAALDDAALDAVLPGILKTARL GYDGKGQVRVATAQEARDAHAALGGVPCVLEKRLPLKYEVSALIARGADGRSAAFPLAQNVHHNGILALTVVPAPAADAA RVEEAQQAAIRIADTLGYVGVLCVEFFVLEDGSFVANEMAPRPHNSGHYTVDACATSQFEQQVRAMTRMPLGNPRQHSPA AMLNILGDVWFPNGAAADAVTPPWDTVAAMPAAHLHLYGKEEARVGRKMGHVNFTAETRDEAVAAATACAQLLRVPLD
Sequences:
>Translated_398_residues MTATPDSVSPILPGAWLGMVGGGQLGRMFCFAAQSMGYRVAVLDPDPASPAGAVADRHLRAAYDDEAALAELADLCEAVS TEFENVPAASLDFLARTTFVAPAGRCVAVAQDRIAEKRFIEASGVPVAPHVVIESAAALAALDDAALDAVLPGILKTARL GYDGKGQVRVATAQEARDAHAALGGVPCVLEKRLPLKYEVSALIARGADGRSAAFPLAQNVHHNGILALTVVPAPAADAA RVEEAQQAAIRIADTLGYVGVLCVEFFVLEDGSFVANEMAPRPHNSGHYTVDACATSQFEQQVRAMTRMPLGNPRQHSPA AMLNILGDVWFPNGAAADAVTPPWDTVAAMPAAHLHLYGKEEARVGRKMGHVNFTAETRDEAVAAATACAQLLRVPLD >Mature_397_residues TATPDSVSPILPGAWLGMVGGGQLGRMFCFAAQSMGYRVAVLDPDPASPAGAVADRHLRAAYDDEAALAELADLCEAVST EFENVPAASLDFLARTTFVAPAGRCVAVAQDRIAEKRFIEASGVPVAPHVVIESAAALAALDDAALDAVLPGILKTARLG YDGKGQVRVATAQEARDAHAALGGVPCVLEKRLPLKYEVSALIARGADGRSAAFPLAQNVHHNGILALTVVPAPAADAAR VEEAQQAAIRIADTLGYVGVLCVEFFVLEDGSFVANEMAPRPHNSGHYTVDACATSQFEQQVRAMTRMPLGNPRQHSPAA MLNILGDVWFPNGAAADAVTPPWDTVAAMPAAHLHLYGKEEARVGRKMGHVNFTAETRDEAVAAATACAQLLRVPLD
Specific function: Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR) [H]
COG id: COG0026
COG function: function code F; Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ATP-grasp domain [H]
Homologues:
Organism=Escherichia coli, GI1786733, Length=378, Percent_Identity=33.0687830687831, Blast_Score=159, Evalue=4e-40, Organism=Escherichia coli, GI1788155, Length=389, Percent_Identity=26.9922879177378, Blast_Score=89, Evalue=6e-19, Organism=Saccharomyces cerevisiae, GI6324702, Length=377, Percent_Identity=31.5649867374005, Blast_Score=198, Evalue=1e-51,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006115 - InterPro: IPR005875 - InterPro: IPR011761 - InterPro: IPR003135 - InterPro: IPR013815 - InterPro: IPR013816 - InterPro: IPR013817 - InterPro: IPR016185 - InterPro: IPR011054 [H]
Pfam domain/function: PF02222 ATP-grasp; PF03446 NAD_binding_2 [H]
EC number: =6.3.4.18 [H]
Molecular weight: Translated: 41650; Mature: 41519
Theoretical pI: Translated: 5.09; Mature: 5.09
Prosite motif: PS50975 ATP_GRASP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTATPDSVSPILPGAWLGMVGGGQLGRMFCFAAQSMGYRVAVLDPDPASPAGAVADRHLR CCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHH AAYDDEAALAELADLCEAVSTEFENVPAASLDFLARTTFVAPAGRCVAVAQDRIAEKRFI HHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHH EASGVPVAPHVVIESAAALAALDDAALDAVLPGILKTARLGYDGKGQVRVATAQEARDAH HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHH AALGGVPCVLEKRLPLKYEVSALIARGADGRSAAFPLAQNVHHNGILALTVVPAPAADAA HHHCCCCHHHHCCCCCHHHHHHHHHCCCCCCCCCCCHHHCCCCCCEEEEEEECCCCCHHH RVEEAQQAAIRIADTLGYVGVLCVEFFVLEDGSFVANEMAPRPHNSGHYTVDACATSQFE HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCEEEEHHHHHHHH QQVRAMTRMPLGNPRQHSPAAMLNILGDVWFPNGAAADAVTPPWDTVAAMPAAHLHLYGK HHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCHHHEEEECC EEARVGRKMGHVNFTAETRDEAVAAATACAQLLRVPLD HHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TATPDSVSPILPGAWLGMVGGGQLGRMFCFAAQSMGYRVAVLDPDPASPAGAVADRHLR CCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHH AAYDDEAALAELADLCEAVSTEFENVPAASLDFLARTTFVAPAGRCVAVAQDRIAEKRFI HHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHH EASGVPVAPHVVIESAAALAALDDAALDAVLPGILKTARLGYDGKGQVRVATAQEARDAH HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHH AALGGVPCVLEKRLPLKYEVSALIARGADGRSAAFPLAQNVHHNGILALTVVPAPAADAA HHHCCCCHHHHCCCCCHHHHHHHHHCCCCCCCCCCCHHHCCCCCCEEEEEEECCCCCHHH RVEEAQQAAIRIADTLGYVGVLCVEFFVLEDGSFVANEMAPRPHNSGHYTVDACATSQFE HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCEEEEHHHHHHHH QQVRAMTRMPLGNPRQHSPAAMLNILGDVWFPNGAAADAVTPPWDTVAAMPAAHLHLYGK HHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCHHHEEEECC EEARVGRKMGHVNFTAETRDEAVAAATACAQLLRVPLD HHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 3036807; 9384377 [H]