| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is dalD [H]
Identifier: 116690605
GI number: 116690605
Start: 2861462
End: 2862856
Strand: Direct
Name: dalD [H]
Synonym: Bcen2424_2585
Alternate gene names: 116690605
Gene position: 2861462-2862856 (Clockwise)
Preceding gene: 116690604
Following gene: 116690606
Centisome position: 82.13
GC content: 70.9
Gene sequence:
>1395_bases ATGAGCGAATCGCCCGCCGCCCACGCGCCCGTGCTGCTGCACATCGGCGCGGGCTCGTTTCACCGCGCGCACCAGGCGTG GTATCTGCATCGCGTGAACGCGGCCGTGCCGGCCGACGAACGCTGGTCGCTAACCGTCGGCAACATCCGCGACGACATGC GCGCGACGATGGACGCGCTCGCCGCGCAGCACGGTGCGTACACGCTCGAAACCGTCACGCCGCAAGGCGAGCGCGCGTAC GAGACGATCCGTGCGATCACGCGCGTGCTGCCGTGGTCGATCGACCTCGCCGCGCTGATCGACGCCGGCGCCGATCCGGC CTGCCGGATCGTGTCGTTCACCGTCACCGAAGGCGGCTACTACCTCGACGAACACAACCGGCTCGACATCGCGAACGCCG ATCTCGCCGCCGACCTGCAGGGCGCACGCACGACGCTGTACGGCGCGCTCGCCGCGCTGCTCGCCGAACGCGTGAAGCGC GGCGCGGGGCCGCTCACGCTGCAAAGCTGCGACAACCTGCGCAACAACGGCGCACGGTTTCGCGCGGGGATGCGCGAATT CCTCGAACGGCGCGGCGAAGGCGGCCTGCTCGCATGGTTCGATGCGCACGTCGCGACGCCCAGCGCGATGGTCGACCGCA TCACGCCGCGCCCGACCGCCGACGTGCGCGAGCGCGTCCTCGCGGCCACCGGCATCGACGACGCGTGCCCGGTGATGGGC GAATCGTTCATCCAGTGGGTGATCGAGGACCGCTTCGCGGCCGGTCGCCCGCGCTGGGAGCTGGCCGGCGCCGAACTCGT CGACGACGTGCATCCGTACGAGGAAGCGAAGATCCGCATCCTCAACGCGACGCACAGCTGCATCGCATGGGCCGGCACGC TCGCGGGCCATACCTACATCCACGAAGGCACGCACGACCCGGCGATCCGCCGCTTCGCGCACGACTACGTGACGCAGGAC GTGATCCCGTGCCTCACGCCGAGCCCGCTCGATCTCGCACGCTATCGCGACGTCGTGCTGGAGCGCTTCGGCAATCCGTA CGTGCTCGACACGAACCAGCGGGTCGCGGCCGACGGTTTCTCGAAGATCCCCGGCTTCATCGCGCCGACGCTCGTCGAAT CGTTCGCTCGCGGCGCGGCACCCGTCGCCACCGCCGTGCTGCCCGCGCTGTTCCTGCGCTTTCTCGAACGCTGGGCGCGC GGCACGCTGCCATATGCGTACCAGGACGGCGTGATGGACGACGGCAGCGCACGCGCGATCGTCGAAGCCGACGACCCGGT CGTCGCGTTGTGCGCGAGCCGCGCCTTGTGGGGCTCGCTCGCCGGCAACGCGGCGCTGTTCGACGCGCTGCGCGCCGGGC TCGCGCGCGTCGACGCCTGGCTCACCGCCCGCTGA
Upstream 100 bases:
>100_bases CCCGCCTTGACTTTCGTCCGCCTGAATACGATCATTCGCTCACACAAAGAGCAAAAGATCGTATTCGGCAGGATAGACAG GCTGGAACAGGAGACACCGG
Downstream 100 bases:
>100_bases TGACCCGCGCGCGGCGCCCGGCCGCGCAGCCGGGCGAACCCGCTTGGCACAGGCCGTGCGGCACGGCTAAAGTAGCGGCT CCTCACTGACCGAACGGATC
Product: mannitol dehydrogenase domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 464; Mature: 463
Protein sequence:
>464_residues MSESPAAHAPVLLHIGAGSFHRAHQAWYLHRVNAAVPADERWSLTVGNIRDDMRATMDALAAQHGAYTLETVTPQGERAY ETIRAITRVLPWSIDLAALIDAGADPACRIVSFTVTEGGYYLDEHNRLDIANADLAADLQGARTTLYGALAALLAERVKR GAGPLTLQSCDNLRNNGARFRAGMREFLERRGEGGLLAWFDAHVATPSAMVDRITPRPTADVRERVLAATGIDDACPVMG ESFIQWVIEDRFAAGRPRWELAGAELVDDVHPYEEAKIRILNATHSCIAWAGTLAGHTYIHEGTHDPAIRRFAHDYVTQD VIPCLTPSPLDLARYRDVVLERFGNPYVLDTNQRVAADGFSKIPGFIAPTLVESFARGAAPVATAVLPALFLRFLERWAR GTLPYAYQDGVMDDGSARAIVEADDPVVALCASRALWGSLAGNAALFDALRAGLARVDAWLTAR
Sequences:
>Translated_464_residues MSESPAAHAPVLLHIGAGSFHRAHQAWYLHRVNAAVPADERWSLTVGNIRDDMRATMDALAAQHGAYTLETVTPQGERAY ETIRAITRVLPWSIDLAALIDAGADPACRIVSFTVTEGGYYLDEHNRLDIANADLAADLQGARTTLYGALAALLAERVKR GAGPLTLQSCDNLRNNGARFRAGMREFLERRGEGGLLAWFDAHVATPSAMVDRITPRPTADVRERVLAATGIDDACPVMG ESFIQWVIEDRFAAGRPRWELAGAELVDDVHPYEEAKIRILNATHSCIAWAGTLAGHTYIHEGTHDPAIRRFAHDYVTQD VIPCLTPSPLDLARYRDVVLERFGNPYVLDTNQRVAADGFSKIPGFIAPTLVESFARGAAPVATAVLPALFLRFLERWAR GTLPYAYQDGVMDDGSARAIVEADDPVVALCASRALWGSLAGNAALFDALRAGLARVDAWLTAR >Mature_463_residues SESPAAHAPVLLHIGAGSFHRAHQAWYLHRVNAAVPADERWSLTVGNIRDDMRATMDALAAQHGAYTLETVTPQGERAYE TIRAITRVLPWSIDLAALIDAGADPACRIVSFTVTEGGYYLDEHNRLDIANADLAADLQGARTTLYGALAALLAERVKRG AGPLTLQSCDNLRNNGARFRAGMREFLERRGEGGLLAWFDAHVATPSAMVDRITPRPTADVRERVLAATGIDDACPVMGE SFIQWVIEDRFAAGRPRWELAGAELVDDVHPYEEAKIRILNATHSCIAWAGTLAGHTYIHEGTHDPAIRRFAHDYVTQDV IPCLTPSPLDLARYRDVVLERFGNPYVLDTNQRVAADGFSKIPGFIAPTLVESFARGAAPVATAVLPALFLRFLERWARG TLPYAYQDGVMDDGSARAIVEADDPVVALCASRALWGSLAGNAALFDALRAGLARVDAWLTAR
Specific function: Unknown
COG id: COG0246
COG function: function code G; Mannitol-1-phosphate/altronate dehydrogenases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mannitol dehydrogenase family [H]
Homologues:
Organism=Escherichia coli, GI1788497, Length=357, Percent_Identity=36.1344537815126, Blast_Score=212, Evalue=3e-56, Organism=Escherichia coli, GI1790779, Length=361, Percent_Identity=34.9030470914127, Blast_Score=200, Evalue=1e-52, Organism=Escherichia coli, GI1787823, Length=450, Percent_Identity=32, Blast_Score=195, Evalue=6e-51, Organism=Escherichia coli, GI48994885, Length=404, Percent_Identity=24.7524752475248, Blast_Score=88, Evalue=1e-18, Organism=Escherichia coli, GI1790028, Length=367, Percent_Identity=24.5231607629428, Blast_Score=78, Evalue=9e-16, Organism=Saccharomyces cerevisiae, GI6324401, Length=423, Percent_Identity=37.5886524822695, Blast_Score=262, Evalue=8e-71, Organism=Saccharomyces cerevisiae, GI6320765, Length=423, Percent_Identity=37.5886524822695, Blast_Score=262, Evalue=8e-71,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008927 - InterPro: IPR013328 - InterPro: IPR000669 - InterPro: IPR013118 - InterPro: IPR013131 - InterPro: IPR016040 [H]
Pfam domain/function: PF01232 Mannitol_dh; PF08125 Mannitol_dh_C [H]
EC number: =1.1.1.11 [H]
Molecular weight: Translated: 50495; Mature: 50363
Theoretical pI: Translated: 5.88; Mature: 5.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSESPAAHAPVLLHIGAGSFHRAHQAWYLHRVNAAVPADERWSLTVGNIRDDMRATMDAL CCCCCCCCCCEEEEECCCCHHHHHHHHHHEECCCCCCCCCCCEEEECCHHHHHHHHHHHH AAQHGAYTLETVTPQGERAYETIRAITRVLPWSIDLAALIDAGADPACRIVSFTVTEGGY HHHCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCEEEEEEEEECCCE YLDEHNRLDIANADLAADLQGARTTLYGALAALLAERVKRGAGPLTLQSCDNLRNNGARF EECCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHCCCHHH RAGMREFLERRGEGGLLAWFDAHVATPSAMVDRITPRPTADVRERVLAATGIDDACPVMG HHHHHHHHHHCCCCCEEEEEECHHCCHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCHHHH ESFIQWVIEDRFAAGRPRWELAGAELVDDVHPYEEAKIRILNATHSCIAWAGTLAGHTYI HHHHHHHHHHHHHCCCCCCEECCHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHCCCEE HEGTHDPAIRRFAHDYVTQDVIPCLTPSPLDLARYRDVVLERFGNPYVLDTNQRVAADGF ECCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCHHHCCH SKIPGFIAPTLVESFARGAAPVATAVLPALFLRFLERWARGTLPYAYQDGVMDDGSARAI HHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEE VEADDPVVALCASRALWGSLAGNAALFDALRAGLARVDAWLTAR EECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SESPAAHAPVLLHIGAGSFHRAHQAWYLHRVNAAVPADERWSLTVGNIRDDMRATMDAL CCCCCCCCCEEEEECCCCHHHHHHHHHHEECCCCCCCCCCCEEEECCHHHHHHHHHHHH AAQHGAYTLETVTPQGERAYETIRAITRVLPWSIDLAALIDAGADPACRIVSFTVTEGGY HHHCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCEEEEEEEEECCCE YLDEHNRLDIANADLAADLQGARTTLYGALAALLAERVKRGAGPLTLQSCDNLRNNGARF EECCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHCCCHHH RAGMREFLERRGEGGLLAWFDAHVATPSAMVDRITPRPTADVRERVLAATGIDDACPVMG HHHHHHHHHHCCCCCEEEEEECHHCCHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCHHHH ESFIQWVIEDRFAAGRPRWELAGAELVDDVHPYEEAKIRILNATHSCIAWAGTLAGHTYI HHHHHHHHHHHHHCCCCCCEECCHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHCCCEE HEGTHDPAIRRFAHDYVTQDVIPCLTPSPLDLARYRDVVLERFGNPYVLDTNQRVAADGF ECCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCHHHCCH SKIPGFIAPTLVESFARGAAPVATAVLPALFLRFLERWARGTLPYAYQDGVMDDGSARAI HHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEE VEADDPVVALCASRALWGSLAGNAALFDALRAGLARVDAWLTAR EECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11823852 [H]