| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is yjeE [H]
Identifier: 116690582
GI number: 116690582
Start: 2837453
End: 2838049
Strand: Direct
Name: yjeE [H]
Synonym: Bcen2424_2562
Alternate gene names: 116690582
Gene position: 2837453-2838049 (Clockwise)
Preceding gene: 116690578
Following gene: 116690583
Centisome position: 81.44
GC content: 65.66
Gene sequence:
>597_bases ATGCGGCGCGTTCCGGTAGTCGGTTCATCGCACTATTTTACGAGAATGCCAGCCACGTCCAGCCAACCGCCTCATGCCAC GTTGCCCGCCCCGCTCGCGGAGCGCGTGGTCGCGCTCGCCGACGAAGCGGCAACCGAGGCCTTCGGCACCCGCTTCGCGC ACGCGCTCGACGCGGCGCGCCTCGAGCTCGACCGCGCGCATACGTTCGACGGGCTGCAGATCCAGCTGGTCGGCGATCTC GGCGCGGGCAAGACGACCCTCGTGCGCGCGATCCTGCGCGGCCTCGGCCACGAGGGGCGTGTGCGCAGCCCAACCTATAC GCTCGTCGAGCCGTACGCGCTCGAACGCAGCGATGGGGAACTCGAGGTCTATCACTTCGATCTGTATCGATTCAACGATC CGGCCGAATGGTCCGATGCAGGCTTTCGCGAATATTTCAATTCCACCGCGATCTGCCTCGTCGAATGGCCGCAACAGGCG GGCGCCCTGCTCGGCGTGCCCGATCTGGTTTTCTCGCTCGACGTGGATGGCGACGGCCGTGCCCTCACCGTCCGGGCGTA CAGCGCTTCAGGAAAGGCATGTCTCGAAAGATGTTGA
Upstream 100 bases:
>100_bases TCGCGCCCCCACGCCCTGATGCGAGCGGCGAGCGCAGTCAACGCCGCATCGTCGAGCGCGCACGGCGCCGCGCCTTCGTC ACGAGTCGAAGGCCTGTCGG
Downstream 100 bases:
>100_bases TCAAACCGTTCCGCTCGATCGAATCGGCGGCCACCGCGACGCACAACTGGCGGCGCCGTCAGATCCTGCGCGCGGGGGCG TCGACGCTGGTGCTCGGTCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 198; Mature: 198
Protein sequence:
>198_residues MRRVPVVGSSHYFTRMPATSSQPPHATLPAPLAERVVALADEAATEAFGTRFAHALDAARLELDRAHTFDGLQIQLVGDL GAGKTTLVRAILRGLGHEGRVRSPTYTLVEPYALERSDGELEVYHFDLYRFNDPAEWSDAGFREYFNSTAICLVEWPQQA GALLGVPDLVFSLDVDGDGRALTVRAYSASGKACLERC
Sequences:
>Translated_198_residues MRRVPVVGSSHYFTRMPATSSQPPHATLPAPLAERVVALADEAATEAFGTRFAHALDAARLELDRAHTFDGLQIQLVGDL GAGKTTLVRAILRGLGHEGRVRSPTYTLVEPYALERSDGELEVYHFDLYRFNDPAEWSDAGFREYFNSTAICLVEWPQQA GALLGVPDLVFSLDVDGDGRALTVRAYSASGKACLERC >Mature_198_residues MRRVPVVGSSHYFTRMPATSSQPPHATLPAPLAERVVALADEAATEAFGTRFAHALDAARLELDRAHTFDGLQIQLVGDL GAGKTTLVRAILRGLGHEGRVRSPTYTLVEPYALERSDGELEVYHFDLYRFNDPAEWSDAGFREYFNSTAICLVEWPQQA GALLGVPDLVFSLDVDGDGRALTVRAYSASGKACLERC
Specific function: Unknown
COG id: COG0802
COG function: function code R; Predicted ATPase or kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0079 family [H]
Homologues:
Organism=Escherichia coli, GI1790610, Length=166, Percent_Identity=48.1927710843374, Blast_Score=144, Evalue=3e-36,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003442 [H]
Pfam domain/function: PF02367 UPF0079 [H]
EC number: NA
Molecular weight: Translated: 21637; Mature: 21637
Theoretical pI: Translated: 5.28; Mature: 5.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRVPVVGSSHYFTRMPATSSQPPHATLPAPLAERVVALADEAATEAFGTRFAHALDAAR CCCCCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LELDRAHTFDGLQIQLVGDLGAGKTTLVRAILRGLGHEGRVRSPTYTLVEPYALERSDGE HHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCEEEEECCEEEECCCCC LEVYHFDLYRFNDPAEWSDAGFREYFNSTAICLVEWPQQAGALLGVPDLVFSLDVDGDGR EEEEEEEEEEECCCCCCCCCHHHHHHCCCEEEEEECCCCCCCEECCCCEEEEEEECCCCC ALTVRAYSASGKACLERC EEEEEEECCCCHHHHHCC >Mature Secondary Structure MRRVPVVGSSHYFTRMPATSSQPPHATLPAPLAERVVALADEAATEAFGTRFAHALDAAR CCCCCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LELDRAHTFDGLQIQLVGDLGAGKTTLVRAILRGLGHEGRVRSPTYTLVEPYALERSDGE HHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCEEEEECCEEEECCCCC LEVYHFDLYRFNDPAEWSDAGFREYFNSTAICLVEWPQQAGALLGVPDLVFSLDVDGDGR EEEEEEEEEEECCCCCCCCCHHHHHHCCCEEEEEECCCCCCCEECCCCEEEEEEECCCCC ALTVRAYSASGKACLERC EEEEEEECCCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP [C]
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]