| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is coaBC [H]
Identifier: 116690534
GI number: 116690534
Start: 2785376
End: 2786587
Strand: Direct
Name: coaBC [H]
Synonym: Bcen2424_2514
Alternate gene names: 116690534
Gene position: 2785376-2786587 (Clockwise)
Preceding gene: 116690533
Following gene: 116690535
Centisome position: 79.95
GC content: 69.22
Gene sequence:
>1212_bases TTGGCACACGCAGAACTTGCAGGAAAACACCTCGTTCTCGGCCTGACGGGCGGCATCGCCTGCTACAAGATCGCCGAACT CACGCGGCTGCTCGTGAAGGCCGGCGCGACCGTGCAGGTCGCGATGACCGACGCCGCCACCCAGTTCATCACGCCCGTCA CGATGCAGGCGCTGTCGGGCCGGCCCGTCTATACGAGCCAGTGGGACGCGCGTATCGACAACAACATGGCGCACATCGAC CTGTCGCGCGAAGCCGACGCGATCGTGATCGCGCCCGCGTCGACGGATTTCCTCGCGAAGCTCGCGCACGGGTTCGCCGA CGACCTGCTGTCGACGCTGTGCGTCGCACGCGACTGTCCGCTGCTCGTCGTGCCCGCGATGAACCGCCAGATGTGGCAGA ACCCGGCCACGCAACGCAACGCCGCGCAACTGCGCGCGGACGGCGTATCGGTGCTCGGCCCGGATTCGGGCGCGCAGGCG TGCGGCGAGGTCGGCGACGGCCGCATGCTCGAGCCCGAGGCGATCTATGAAGCGATCGTCGCGCACTTCGCGCCGAAGGT GCTCGCGCACCGCCGCGTGCTGATCACGGCCGGGCCGACCTTCGAACCGCTCGACCCGGTACGCGGCCTGACGAACCGCT CCAGCGGCAAGATGGGTTTCGCGCTCGCGCGCGCCGCGCAACAGGCCGGCGCCGACGTGCATCTCGTCGCCGGGCCGGTC GCGCTCGACACGCCGTGGGGCGTGTACCGCCAGGACGTGCAGACCGCGCAGCAGATGTACGACGCGGTGATGCATGCAGT GGCCGAAGCCGACATCTTCATCGCAGTGGCCGCGGTCGCCGACTGGCGCGTCGACCAGCCGGCCGAGCACAAGATGAAGA AGACGGCCGACCGCAAGATGCCGGCGCTCGCGTTCGTCGAGAATCCCGACATCCTCGCGTCGGTCGCGGCGCTGCCCGAT GCGCCATTCTGCGTCGGCTTCGCGGCCGAAAGCGGCGACCTCGACGTGCATGGCGACGAGAAGCGCAAGCGCAAGAACGT GCCGTTGCTCGTCGGTAACCTCGGCCCGCTGACGTTCGGCCGCGACGACAACGAAGTCGTGCTGTTCGAGGCCGCCGGCC TCACGCGCCTGCCGCGCGCCCCGAAGGACGAACTCGCGCACGTGCTCGTCGCGGAAATCGCGAAGCGCCTGCCCGACAAC CGCCTGATCTGA
Upstream 100 bases:
>100_bases ACGAGCTGCGTCGCGTGCGCGGCGCGCGCTGAGCGCGCATACTCCGTGTCGACGGCCGGCTTCGCGCCGGCCGTTCCGTT TGACCCCCAGGAGGCCTGAG
Downstream 100 bases:
>100_bases TCCCGCGCGGCGGCCATAGCCGCCGCGCCCTTCCCGACCGATTCGACGACCGCATGAAACTCGACCTGAAGATTCTCGAC GCGCGCATGCGCGACTACCT
Product: bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase
Products: NA
Alternate protein names: DNA/pantothenate metabolism flavoprotein; Phosphopantothenoylcysteine decarboxylase; PPCDC; CoaC; Phosphopantothenate--cysteine ligase; CoaB; PPC synthetase; PPCS; Phosphopantothenoylcysteine synthase [H]
Number of amino acids: Translated: 403; Mature: 402
Protein sequence:
>403_residues MAHAELAGKHLVLGLTGGIACYKIAELTRLLVKAGATVQVAMTDAATQFITPVTMQALSGRPVYTSQWDARIDNNMAHID LSREADAIVIAPASTDFLAKLAHGFADDLLSTLCVARDCPLLVVPAMNRQMWQNPATQRNAAQLRADGVSVLGPDSGAQA CGEVGDGRMLEPEAIYEAIVAHFAPKVLAHRRVLITAGPTFEPLDPVRGLTNRSSGKMGFALARAAQQAGADVHLVAGPV ALDTPWGVYRQDVQTAQQMYDAVMHAVAEADIFIAVAAVADWRVDQPAEHKMKKTADRKMPALAFVENPDILASVAALPD APFCVGFAAESGDLDVHGDEKRKRKNVPLLVGNLGPLTFGRDDNEVVLFEAAGLTRLPRAPKDELAHVLVAEIAKRLPDN RLI
Sequences:
>Translated_403_residues MAHAELAGKHLVLGLTGGIACYKIAELTRLLVKAGATVQVAMTDAATQFITPVTMQALSGRPVYTSQWDARIDNNMAHID LSREADAIVIAPASTDFLAKLAHGFADDLLSTLCVARDCPLLVVPAMNRQMWQNPATQRNAAQLRADGVSVLGPDSGAQA CGEVGDGRMLEPEAIYEAIVAHFAPKVLAHRRVLITAGPTFEPLDPVRGLTNRSSGKMGFALARAAQQAGADVHLVAGPV ALDTPWGVYRQDVQTAQQMYDAVMHAVAEADIFIAVAAVADWRVDQPAEHKMKKTADRKMPALAFVENPDILASVAALPD APFCVGFAAESGDLDVHGDEKRKRKNVPLLVGNLGPLTFGRDDNEVVLFEAAGLTRLPRAPKDELAHVLVAEIAKRLPDN RLI >Mature_402_residues AHAELAGKHLVLGLTGGIACYKIAELTRLLVKAGATVQVAMTDAATQFITPVTMQALSGRPVYTSQWDARIDNNMAHIDL SREADAIVIAPASTDFLAKLAHGFADDLLSTLCVARDCPLLVVPAMNRQMWQNPATQRNAAQLRADGVSVLGPDSGAQAC GEVGDGRMLEPEAIYEAIVAHFAPKVLAHRRVLITAGPTFEPLDPVRGLTNRSSGKMGFALARAAQQAGADVHLVAGPVA LDTPWGVYRQDVQTAQQMYDAVMHAVAEADIFIAVAAVADWRVDQPAEHKMKKTADRKMPALAFVENPDILASVAALPDA PFCVGFAAESGDLDVHGDEKRKRKNVPLLVGNLGPLTFGRDDNEVVLFEAAGLTRLPRAPKDELAHVLVAEIAKRLPDNR LI
Specific function: Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine [H]
COG id: COG0452
COG function: function code H; Phosphopantothenoylcysteine synthetase/decarboxylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the PPC synthetase family [H]
Homologues:
Organism=Homo sapiens, GI71725351, Length=177, Percent_Identity=34.4632768361582, Blast_Score=87, Evalue=2e-17, Organism=Escherichia coli, GI87082301, Length=398, Percent_Identity=48.9949748743719, Blast_Score=332, Evalue=3e-92, Organism=Caenorhabditis elegans, GI17560194, Length=177, Percent_Identity=33.3333333333333, Blast_Score=78, Evalue=1e-14, Organism=Saccharomyces cerevisiae, GI6322762, Length=189, Percent_Identity=31.2169312169312, Blast_Score=76, Evalue=1e-14, Organism=Drosophila melanogaster, GI24657262, Length=190, Percent_Identity=32.6315789473684, Blast_Score=92, Evalue=7e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005252 - InterPro: IPR007085 - InterPro: IPR003382 [H]
Pfam domain/function: PF04127 DFP; PF02441 Flavoprotein [H]
EC number: =4.1.1.36; =6.3.2.5 [H]
Molecular weight: Translated: 43085; Mature: 42954
Theoretical pI: Translated: 6.13; Mature: 6.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAHAELAGKHLVLGLTGGIACYKIAELTRLLVKAGATVQVAMTDAATQFITPVTMQALSG CCCCHHCCCEEEEEECCCHHHHHHHHHHHHHHHCCCEEEEEEEHHHHHHHHHHHHHHHCC RPVYTSQWDARIDNNMAHIDLSREADAIVIAPASTDFLAKLAHGFADDLLSTLCVARDCP CCCCCCCCCCHHCCCEEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCC LLVVPAMNRQMWQNPATQRNAAQLRADGVSVLGPDSGAQACGEVGDGRMLEPEAIYEAIV EEEEECCCHHHHCCCCCCHHHHHHHHCCEEEECCCCCHHHHHHCCCCCCCCHHHHHHHHH AHFAPKVLAHRRVLITAGPTFEPLDPVRGLTNRSSGKMGFALARAAQQAGADVHLVAGPV HHHHHHHHHCCEEEEEECCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCE ALDTPWGVYRQDVQTAQQMYDAVMHAVAEADIFIAVAAVADWRVDQPAEHKMKKTADRKM EECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEHHHCCCCCCCHHHHHHHHHHHCC PALAFVENPDILASVAALPDAPFCVGFAAESGDLDVHGDEKRKRKNVPLLVGNLGPLTFG CEEEEECCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHCCCCEEEECCCCEEEC RDDNEVVLFEAAGLTRLPRAPKDELAHVLVAEIAKRLPDNRLI CCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure AHAELAGKHLVLGLTGGIACYKIAELTRLLVKAGATVQVAMTDAATQFITPVTMQALSG CCCHHCCCEEEEEECCCHHHHHHHHHHHHHHHCCCEEEEEEEHHHHHHHHHHHHHHHCC RPVYTSQWDARIDNNMAHIDLSREADAIVIAPASTDFLAKLAHGFADDLLSTLCVARDCP CCCCCCCCCCHHCCCEEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCC LLVVPAMNRQMWQNPATQRNAAQLRADGVSVLGPDSGAQACGEVGDGRMLEPEAIYEAIV EEEEECCCHHHHCCCCCCHHHHHHHHCCEEEECCCCCHHHHHHCCCCCCCCHHHHHHHHH AHFAPKVLAHRRVLITAGPTFEPLDPVRGLTNRSSGKMGFALARAAQQAGADVHLVAGPV HHHHHHHHHCCEEEEEECCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCE ALDTPWGVYRQDVQTAQQMYDAVMHAVAEADIFIAVAAVADWRVDQPAEHKMKKTADRKM EECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEHHHCCCCCCCHHHHHHHHHHHCC PALAFVENPDILASVAALPDAPFCVGFAAESGDLDVHGDEKRKRKNVPLLVGNLGPLTFG CEEEEECCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHCCCCEEEECCCCEEEC RDDNEVVLFEAAGLTRLPRAPKDELAHVLVAEIAKRLPDNRLI CCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10952301 [H]