| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116690518
Identifier: 116690518
GI number: 116690518
Start: 2767895
End: 2768548
Strand: Reverse
Name: 116690518
Synonym: Bcen2424_2498
Alternate gene names: NA
Gene position: 2768548-2767895 (Counterclockwise)
Preceding gene: 116690519
Following gene: 116690517
Centisome position: 79.47
GC content: 68.65
Gene sequence:
>654_bases ATGCATGTGAAGTTGGCTTACGCCGTGTCCGTCGCCGCACCGGTTGCAATGCTTGCCGGCTGCAGCAAAAAGAGCGACGA CGAGGCGGGCAGGGAGGCCGCGGGGGGCGCGGCACCATCGGCCGGCGGCGTGCGCGTCGCCGGAGCCGGACGTGCGGCGC CATCGGCGCGCCGTATCGCGCAACTGGGCAGGGACAAGGAAAACGGGGCACGTTTGACGAGTTTGACGATCGAGGAAATC CACGCGCGCAGCCTGGCGACCGGGCCGGCAGCGGGCATGCCGGCTGCGTCGCGGCCAGCCGCCGATCGACGGATGCCGGA TGCTCACGGCCTGGCCGGCAGCGTGCCGAGGCCACTGTCCCCCCTTCAATTCGATTCGACGAAACAGCGCGCCGCCGCGA CCGACCGTGTCGCGACGCGCAGTCTGGTTCGTACGATGGATTCCGATGCAGTCCTGACGAAAGTCGGGCGCGGCTGTCGC AACGCCCTCGCCGGCGACGCGACGCGGAATCCGATCCGTCCTGGCGCGATGCTTGCATGGCACTGGACGGGCCAAGGCAC GGATGCCGGGAAACCGGACGACGGCCGTCTCGGCATGCTGCCCCACGACTTCAAGGAGGCCACGAACACCGTCCTCGATG TCGTGACGATTTAG
Upstream 100 bases:
>100_bases TCAGGAATATTGGCGTCCTATAAATGGAGTTACAATGCGCCCGTTTTCAAGCCGGAATGGCTTTGAAATCGGGATTTGGC AAGGCGCGGGAGACCATTCA
Downstream 100 bases:
>100_bases CGACGGGACTCATGACGGCACCGGAACAGTGCGGTGCCGTTTTTGTATCCGCTTCGGCGGCAGGTCCGGCCGTACAGGCC GGGCGGCGCGCGCCGGAACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 217; Mature: 217
Protein sequence:
>217_residues MHVKLAYAVSVAAPVAMLAGCSKKSDDEAGREAAGGAAPSAGGVRVAGAGRAAPSARRIAQLGRDKENGARLTSLTIEEI HARSLATGPAAGMPAASRPAADRRMPDAHGLAGSVPRPLSPLQFDSTKQRAAATDRVATRSLVRTMDSDAVLTKVGRGCR NALAGDATRNPIRPGAMLAWHWTGQGTDAGKPDDGRLGMLPHDFKEATNTVLDVVTI
Sequences:
>Translated_217_residues MHVKLAYAVSVAAPVAMLAGCSKKSDDEAGREAAGGAAPSAGGVRVAGAGRAAPSARRIAQLGRDKENGARLTSLTIEEI HARSLATGPAAGMPAASRPAADRRMPDAHGLAGSVPRPLSPLQFDSTKQRAAATDRVATRSLVRTMDSDAVLTKVGRGCR NALAGDATRNPIRPGAMLAWHWTGQGTDAGKPDDGRLGMLPHDFKEATNTVLDVVTI >Mature_217_residues MHVKLAYAVSVAAPVAMLAGCSKKSDDEAGREAAGGAAPSAGGVRVAGAGRAAPSARRIAQLGRDKENGARLTSLTIEEI HARSLATGPAAGMPAASRPAADRRMPDAHGLAGSVPRPLSPLQFDSTKQRAAATDRVATRSLVRTMDSDAVLTKVGRGCR NALAGDATRNPIRPGAMLAWHWTGQGTDAGKPDDGRLGMLPHDFKEATNTVLDVVTI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22332; Mature: 22332
Theoretical pI: Translated: 10.76; Mature: 10.76
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHVKLAYAVSVAAPVAMLAGCSKKSDDEAGREAAGGAAPSAGGVRVAGAGRAAPSARRIA CEEEEHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCEEEECCCCCCHHHHHHH QLGRDKENGARLTSLTIEEIHARSLATGPAAGMPAASRPAADRRMPDAHGLAGSVPRPLS HHCCCCCCCCEEEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PLQFDSTKQRAAATDRVATRSLVRTMDSDAVLTKVGRGCRNALAGDATRNPIRPGAMLAW CCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEE HWTGQGTDAGKPDDGRLGMLPHDFKEATNTVLDVVTI EECCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure MHVKLAYAVSVAAPVAMLAGCSKKSDDEAGREAAGGAAPSAGGVRVAGAGRAAPSARRIA CEEEEHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCEEEECCCCCCHHHHHHH QLGRDKENGARLTSLTIEEIHARSLATGPAAGMPAASRPAADRRMPDAHGLAGSVPRPLS HHCCCCCCCCEEEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PLQFDSTKQRAAATDRVATRSLVRTMDSDAVLTKVGRGCRNALAGDATRNPIRPGAMLAW CCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEE HWTGQGTDAGKPDDGRLGMLPHDFKEATNTVLDVVTI EECCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA