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The map label for this gene is lptF [H]

Identifier: 116690487

GI number: 116690487

Start: 2738303

End: 2739397

Strand: Direct

Name: lptF [H]

Synonym: Bcen2424_2467

Alternate gene names: 116690487

Gene position: 2738303-2739397 (Clockwise)

Preceding gene: 116690483

Following gene: 116690488

Centisome position: 78.6

GC content: 63.65

Gene sequence:

>1095_bases
ATGATCTTCGAACGCTCCCTCCAGCGCGAGCTTGCGTATACGGCTGGCGCCGTGTTCATGGTGCTGCTCACGATCATGCT
CACGACGATGATGATTCGCATCGTCGGCTACGCCGCGTCCGGCGAAATCGATCCGCGGGACGTGCTCGTGCTGATCGGCC
TGACCGTGATCGGCTACCTCGCCGTGATGCTCGTCGTCACGCTGTTCGTGTCGATCCTGTTCGTGCTGACCCGGTGGTAC
CGGGACTCCGAAATGGTGGTGTGGCTCGCGTCGGGCGTGAGCCTCACGCGCCTCATCAAGCCGATCGGCGTGTTCGCCAC
GCCGATCATCCTGCTGATCACCTTCTTCGCGTTCGTCGGCTGGCCGTGGTCGAACCAGCAGAGCAAGATGATCCGCGCGC
GCTTCCAGCAGCGCGACGAAATCTCGCTGCTCGCGCCGGGCCAGTTCCGCGAATCGGCCGCGAACCATCGCGTGTTCTTC
ATCGAGAAGATGTCGCCGGACCAGAGCAAGGTCCAGAACGTCTTCGTCACGTCGACGGAAAACGGCAAGGTCAACGTGGT
CGTGTCGCAAACGGGCCATACGGAAACCTCGAAGGACGGCGATCGCTTCGTCGTCCTCGAGGACGGCCGCCGCTACGACG
GCACGCCCGGCCAGCCGAACTTCAAGATCATGGAGTTCGAGCGCTACGGCGTGAAGATCACGAGCAAGCCGGTCACCAAC
GTGCAGACCACCAACAGCACGCCCACGCCCGACCTGCTGCGCAACCCGACGCGCGACAATCTCGCGGAATTCGCGTGGCG
CGCGGGGCTGCCGCTGATCGCGATCAACCTGATGGTGCTCGGCATCCCGCTGTCGTACCAGAACCCGCGCCGCAGCCGCA
CGATCAACCTCGTGATGGCCGTGCTGATCTACCTCACGTACTCGAACCTGCTGAACGTCGTGCAGGCGCAGATCGAGCAG
GGCAAGATGTCGTTCGGCGTCGGCCTCGTCGGCCTGCATGTGGTCGTCGCGGCGATCGTCGCGTTCATTTTCTGGTTGCG
CGTGCGCAATCGTCCGTTGTTGACACGCGCGCTGTTCGGCCGCTCGGGAGCATGA

Upstream 100 bases:

>100_bases
CTGGGCTAAGGATGAAAGCCGCAATTATCCGCTATTTTTCCCGTGGCGGCGCGAGCGCTCCACCACGCGTGCGCAGCCTC
CCGCCCTCTTCTCATCAAGA

Downstream 100 bases:

>100_bases
TCGATGCGGCTCTATGAAAAATACTTCGCGCGGCAGATCTACATCACGTTCGTCTTCATCCTGTTCGCGTTCTCGGGTCT
GTTCTTCTTCTTCGACCTGA

Product: permease YjgP/YjgQ family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 364; Mature: 364

Protein sequence:

>364_residues
MIFERSLQRELAYTAGAVFMVLLTIMLTTMMIRIVGYAASGEIDPRDVLVLIGLTVIGYLAVMLVVTLFVSILFVLTRWY
RDSEMVVWLASGVSLTRLIKPIGVFATPIILLITFFAFVGWPWSNQQSKMIRARFQQRDEISLLAPGQFRESAANHRVFF
IEKMSPDQSKVQNVFVTSTENGKVNVVVSQTGHTETSKDGDRFVVLEDGRRYDGTPGQPNFKIMEFERYGVKITSKPVTN
VQTTNSTPTPDLLRNPTRDNLAEFAWRAGLPLIAINLMVLGIPLSYQNPRRSRTINLVMAVLIYLTYSNLLNVVQAQIEQ
GKMSFGVGLVGLHVVVAAIVAFIFWLRVRNRPLLTRALFGRSGA

Sequences:

>Translated_364_residues
MIFERSLQRELAYTAGAVFMVLLTIMLTTMMIRIVGYAASGEIDPRDVLVLIGLTVIGYLAVMLVVTLFVSILFVLTRWY
RDSEMVVWLASGVSLTRLIKPIGVFATPIILLITFFAFVGWPWSNQQSKMIRARFQQRDEISLLAPGQFRESAANHRVFF
IEKMSPDQSKVQNVFVTSTENGKVNVVVSQTGHTETSKDGDRFVVLEDGRRYDGTPGQPNFKIMEFERYGVKITSKPVTN
VQTTNSTPTPDLLRNPTRDNLAEFAWRAGLPLIAINLMVLGIPLSYQNPRRSRTINLVMAVLIYLTYSNLLNVVQAQIEQ
GKMSFGVGLVGLHVVVAAIVAFIFWLRVRNRPLLTRALFGRSGA
>Mature_364_residues
MIFERSLQRELAYTAGAVFMVLLTIMLTTMMIRIVGYAASGEIDPRDVLVLIGLTVIGYLAVMLVVTLFVSILFVLTRWY
RDSEMVVWLASGVSLTRLIKPIGVFATPIILLITFFAFVGWPWSNQQSKMIRARFQQRDEISLLAPGQFRESAANHRVFF
IEKMSPDQSKVQNVFVTSTENGKVNVVVSQTGHTETSKDGDRFVVLEDGRRYDGTPGQPNFKIMEFERYGVKITSKPVTN
VQTTNSTPTPDLLRNPTRDNLAEFAWRAGLPLIAINLMVLGIPLSYQNPRRSRTINLVMAVLIYLTYSNLLNVVQAQIEQ
GKMSFGVGLVGLHVVVAAIVAFIFWLRVRNRPLLTRALFGRSGA

Specific function: Part of the ABC transporter complex lptBFG involved in the translocation of lipopolysaccharide (LPS) from the inner membrane to the outer membrane [H]

COG id: COG0795

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lptF/lptG family [H]

Homologues:

Organism=Escherichia coli, GI1790712, Length=369, Percent_Identity=28.9972899728997, Blast_Score=114, Evalue=1e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005495 [H]

Pfam domain/function: PF03739 YjgP_YjgQ [H]

EC number: NA

Molecular weight: Translated: 40839; Mature: 40839

Theoretical pI: Translated: 10.60; Mature: 10.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIFERSLQRELAYTAGAVFMVLLTIMLTTMMIRIVGYAASGEIDPRDVLVLIGLTVIGYL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
AVMLVVTLFVSILFVLTRWYRDSEMVVWLASGVSLTRLIKPIGVFATPIILLITFFAFVG
HHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
WPWSNQQSKMIRARFQQRDEISLLAPGQFRESAANHRVFFIEKMSPDQSKVQNVFVTSTE
CCCCCCHHHHHHHHHHCCCCEEEECCCHHHHHCCCCEEEEEECCCCCHHHHCEEEEEECC
NGKVNVVVSQTGHTETSKDGDRFVVLEDGRRYDGTPGQPNFKIMEFERYGVKITSKPVTN
CCEEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEEEECCEEEECCCCCC
VQTTNSTPTPDLLRNPTRDNLAEFAWRAGLPLIAINLMVLGIPLSYQNPRRSRTINLVMA
EECCCCCCCHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
VLIYLTYSNLLNVVQAQIEQGKMSFGVGLVGLHVVVAAIVAFIFWLRVRNRPLLTRALFG
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHC
RSGA
CCCC
>Mature Secondary Structure
MIFERSLQRELAYTAGAVFMVLLTIMLTTMMIRIVGYAASGEIDPRDVLVLIGLTVIGYL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
AVMLVVTLFVSILFVLTRWYRDSEMVVWLASGVSLTRLIKPIGVFATPIILLITFFAFVG
HHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
WPWSNQQSKMIRARFQQRDEISLLAPGQFRESAANHRVFFIEKMSPDQSKVQNVFVTSTE
CCCCCCHHHHHHHHHHCCCCEEEECCCHHHHHCCCCEEEEEECCCCCHHHHCEEEEEECC
NGKVNVVVSQTGHTETSKDGDRFVVLEDGRRYDGTPGQPNFKIMEFERYGVKITSKPVTN
CCEEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEEEECCEEEECCCCCC
VQTTNSTPTPDLLRNPTRDNLAEFAWRAGLPLIAINLMVLGIPLSYQNPRRSRTINLVMA
EECCCCCCCHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
VLIYLTYSNLLNVVQAQIEQGKMSFGVGLVGLHVVVAAIVAFIFWLRVRNRPLLTRALFG
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHC
RSGA
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]