| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is mrp [H]
Identifier: 116690455
GI number: 116690455
Start: 2703485
End: 2704576
Strand: Reverse
Name: mrp [H]
Synonym: Bcen2424_2435
Alternate gene names: 116690455
Gene position: 2704576-2703485 (Counterclockwise)
Preceding gene: 116690458
Following gene: 116690454
Centisome position: 77.63
GC content: 68.04
Gene sequence:
>1092_bases ATGAGCATTGACCGGGCACAAGTCGACGCCGCGCTGGCGGCAGTCGTCGACCCCAATACCGGCCGCCCGTACGCGGCGAA CAAGGGCGTGCGCAACGTCGCGATCGACGGCGATGTCGTGGCGCTCGACGTGGTGCTCGGTTATCCGGCGCGCAGCCAGC ACGATGACGTGCGCGCACGCGTCGCCACGGCGCTCCAGGCCGTGCCGGGCGTGCGCGGCGCACGCGTCGCCGTGTCGCAG GAGATCGTCGCGCATACGGTGCAGCGCGGCGTGAAGCTGTTGCCGAATGTGAAGAACATCGTCGCGGTCGCGTCGGGCAA GGGTGGCGTCGGCAAGAGCACGACGGCTGTCAACCTCGCGCTTGCGCTCGCCGCGGAAGGCGCGTCGGTCGGCATTCTCG ACGCCGACATCTACGGCCCGTCGCTGCCGACGATGCTCGGCATCCACGGCCAGCGCCCCGAGTCGCCGGACAACCAGTCG ATGAACCCGCTCGTCGGCCATGGGCTGCAGGCGAACTCGATCGGCTTCCTGATCGAGGAAGACAACCCGATGGTGTGGCG CGGGCCGATGGCGACGTCGGCGCTCGAGCAACTGCTGCGCCAGACCAACTGGCGCGAGCTCGACTACCTGATCGTCGACA TGCCGCCGGGCACGGGCGACATCCAGCTCACGCTCGCGCAGCGCGTGCCCGTCACCGGTGCGGTGATCGTCACGACGCCG CAGGACATCGCGCTGCTCGATGCGAAGAAGGGACTGAAGATGTTCGAGAAGGTCGGGATTCCGATCCTCGGCATCGTCGA GAACATGAGCATCCACATCTGCTCGAACTGCGGCCACGAGGAGCACATCTTCGGCGCCGGCGGGGCGGAACGGATGGCGA AGGATTACGACGTGAACGTGCTCGGCAGCCTACCGCTCGACATCGCGATCCGCGAGCGGGCCGACAGCGGCACGCCGACG GTCGCGGCCGAGCCGGACGGTGCGCTCGCGCGTCGCTACCGCGACATCGCGCGCGGGGTCGCGCTGGCGATTGCCGAGCG ATCGCGCGACATGACGTCGAAGTTCCCGTCGATCGTTGTTCAAAATACGTAA
Upstream 100 bases:
>100_bases AATGGCGTGCAACAGATTCTTTCACTTTTCCCGATTTTCGCAGCGTAATTTGATATTTTTTGACGTTTGCGCGCGAGAAA AACGTTTTCATGGAGTTTTG
Downstream 100 bases:
>100_bases AACCCTTGCGGGGCGGGGCCTCACGCTGTTTACGGCGCCGCGAGGCGCGGTATCATGGCGACTTTTCCCGGGTCCCTTTA CCCGCCCGGCGCGGCCGTCG
Product: cobyrinic acid a,c-diamide synthase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 363; Mature: 362
Protein sequence:
>363_residues MSIDRAQVDAALAAVVDPNTGRPYAANKGVRNVAIDGDVVALDVVLGYPARSQHDDVRARVATALQAVPGVRGARVAVSQ EIVAHTVQRGVKLLPNVKNIVAVASGKGGVGKSTTAVNLALALAAEGASVGILDADIYGPSLPTMLGIHGQRPESPDNQS MNPLVGHGLQANSIGFLIEEDNPMVWRGPMATSALEQLLRQTNWRELDYLIVDMPPGTGDIQLTLAQRVPVTGAVIVTTP QDIALLDAKKGLKMFEKVGIPILGIVENMSIHICSNCGHEEHIFGAGGAERMAKDYDVNVLGSLPLDIAIRERADSGTPT VAAEPDGALARRYRDIARGVALAIAERSRDMTSKFPSIVVQNT
Sequences:
>Translated_363_residues MSIDRAQVDAALAAVVDPNTGRPYAANKGVRNVAIDGDVVALDVVLGYPARSQHDDVRARVATALQAVPGVRGARVAVSQ EIVAHTVQRGVKLLPNVKNIVAVASGKGGVGKSTTAVNLALALAAEGASVGILDADIYGPSLPTMLGIHGQRPESPDNQS MNPLVGHGLQANSIGFLIEEDNPMVWRGPMATSALEQLLRQTNWRELDYLIVDMPPGTGDIQLTLAQRVPVTGAVIVTTP QDIALLDAKKGLKMFEKVGIPILGIVENMSIHICSNCGHEEHIFGAGGAERMAKDYDVNVLGSLPLDIAIRERADSGTPT VAAEPDGALARRYRDIARGVALAIAERSRDMTSKFPSIVVQNT >Mature_362_residues SIDRAQVDAALAAVVDPNTGRPYAANKGVRNVAIDGDVVALDVVLGYPARSQHDDVRARVATALQAVPGVRGARVAVSQE IVAHTVQRGVKLLPNVKNIVAVASGKGGVGKSTTAVNLALALAAEGASVGILDADIYGPSLPTMLGIHGQRPESPDNQSM NPLVGHGLQANSIGFLIEEDNPMVWRGPMATSALEQLLRQTNWRELDYLIVDMPPGTGDIQLTLAQRVPVTGAVIVTTPQ DIALLDAKKGLKMFEKVGIPILGIVENMSIHICSNCGHEEHIFGAGGAERMAKDYDVNVLGSLPLDIAIRERADSGTPTV AAEPDGALARRYRDIARGVALAIAERSRDMTSKFPSIVVQNT
Specific function: Not Known. [C]
COG id: COG0489
COG function: function code D; ATPases involved in chromosome partitioning
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Mrp/NBP35 ATP-binding proteins family [H]
Homologues:
Organism=Homo sapiens, GI157384956, Length=248, Percent_Identity=54.8387096774194, Blast_Score=276, Evalue=2e-74, Organism=Homo sapiens, GI118572611, Length=250, Percent_Identity=41.2, Blast_Score=188, Evalue=5e-48, Organism=Homo sapiens, GI6912540, Length=231, Percent_Identity=41.991341991342, Blast_Score=171, Evalue=1e-42, Organism=Escherichia coli, GI87082045, Length=340, Percent_Identity=55.5882352941177, Blast_Score=365, Evalue=1e-102, Organism=Caenorhabditis elegans, GI25143050, Length=256, Percent_Identity=39.84375, Blast_Score=190, Evalue=1e-48, Organism=Saccharomyces cerevisiae, GI6322188, Length=272, Percent_Identity=35.6617647058824, Blast_Score=178, Evalue=1e-45, Organism=Saccharomyces cerevisiae, GI6321347, Length=240, Percent_Identity=40.4166666666667, Blast_Score=173, Evalue=5e-44, Organism=Drosophila melanogaster, GI221511043, Length=251, Percent_Identity=40.6374501992032, Blast_Score=209, Evalue=3e-54, Organism=Drosophila melanogaster, GI24667611, Length=246, Percent_Identity=42.2764227642276, Blast_Score=185, Evalue=5e-47, Organism=Drosophila melanogaster, GI19921440, Length=242, Percent_Identity=39.2561983471074, Blast_Score=144, Evalue=1e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019591 - InterPro: IPR000808 [H]
Pfam domain/function: PF10609 ParA [H]
EC number: NA
Molecular weight: Translated: 38268; Mature: 38137
Theoretical pI: Translated: 6.17; Mature: 6.17
Prosite motif: PS01215 MRP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIDRAQVDAALAAVVDPNTGRPYAANKGVRNVAIDGDVVALDVVLGYPARSQHDDVRAR CCCCHHHHHHEEEEEECCCCCCCCCCCCCCCEEEECCCEEEEEEEECCCCCCCCHHHHHH VATALQAVPGVRGARVAVSQEIVAHTVQRGVKLLPNVKNIVAVASGKGGVGKSTTAVNLA HHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCHHEEEE LALAAEGASVGILDADIYGPSLPTMLGIHGQRPESPDNQSMNPLVGHGLQANSIGFLIEE EEEEECCCEEEEEECCCCCCCCCHHCCCCCCCCCCCCCCCCCHHHHCCCCCCCEEEEEEC DNPMVWRGPMATSALEQLLRQTNWRELDYLIVDMPPGTGDIQLTLAQRVPVTGAVIVTTP CCCEEEECCCHHHHHHHHHHHCCCCEEEEEEEECCCCCCCEEEEEECCCCCCCEEEEECC QDIALLDAKKGLKMFEKVGIPILGIVENMSIHICSNCGHEEHIFGAGGAERMAKDYDVNV CCEEEEEHHHHHHHHHHCCCCEEEEECCCEEEEECCCCCCCEEECCCCHHHHHCCCCCEE LGSLPLDIAIRERADSGTPTVAAEPDGALARRYRDIARGVALAIAERSRDMTSKFPSIVV EECCCCEEEEEECCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE QNT ECC >Mature Secondary Structure SIDRAQVDAALAAVVDPNTGRPYAANKGVRNVAIDGDVVALDVVLGYPARSQHDDVRAR CCCHHHHHHEEEEEECCCCCCCCCCCCCCCEEEECCCEEEEEEEECCCCCCCCHHHHHH VATALQAVPGVRGARVAVSQEIVAHTVQRGVKLLPNVKNIVAVASGKGGVGKSTTAVNLA HHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCHHEEEE LALAAEGASVGILDADIYGPSLPTMLGIHGQRPESPDNQSMNPLVGHGLQANSIGFLIEE EEEEECCCEEEEEECCCCCCCCCHHCCCCCCCCCCCCCCCCCHHHHCCCCCCCEEEEEEC DNPMVWRGPMATSALEQLLRQTNWRELDYLIVDMPPGTGDIQLTLAQRVPVTGAVIVTTP CCCEEEECCCHHHHHHHHHHHCCCCEEEEEEEECCCCCCCEEEEEECCCCCCCEEEEECC QDIALLDAKKGLKMFEKVGIPILGIVENMSIHICSNCGHEEHIFGAGGAERMAKDYDVNV CCEEEEEHHHHHHHHHHCCCCEEEEECCCEEEEECCCCCCCEEECCCCHHHHHCCCCCEE LGSLPLDIAIRERADSGTPTVAAEPDGALARRYRDIARGVALAIAERSRDMTSKFPSIVV EECCCCEEEEEECCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE QNT ECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]