| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116690451
Identifier: 116690451
GI number: 116690451
Start: 2698956
End: 2699771
Strand: Reverse
Name: 116690451
Synonym: Bcen2424_2431
Alternate gene names: NA
Gene position: 2699771-2698956 (Counterclockwise)
Preceding gene: 116690452
Following gene: 116690447
Centisome position: 77.49
GC content: 74.02
Gene sequence:
>816_bases ATGGCGCCGCGCGGACGATTCCGGACGATGCGCGCGGCGCTGGCCGCGCTCGTCGTCTGGACGGCAGGATTGGCGGGGCT CGCGGGCGCGGGCGTCGCCCACGCGGAAGTCGCGGCGGCCGACCCGATCGATGTCGCGATGCGGCAATGCCTCGCGCGGC GCGACCGGTCGTCGCCGGCCGGGCAGATCCAGTGCATGGGCGAAGCGCAGCAGCAGTGGCAGGCAGTGATGGACGGCGCG TACCAGCGCCTGTCGAAGGATGCGCCGGCCGACGCGAAGCGCGGCTGGCAGGACAGCCAGCGCCGCTGGCTCACGTGGCG CAAGGACGAAGTGCTGCTGCTGAAGGCCGTGTACGACACGACGCGCGGCACCGCATATGCGATGTCGAGCGCCGACCTGC AGCTGCAGCCGGTGCGCGATCGCGCGCTGGCGCTGCGCGGGGCGGCCGATCGCTATGCCCCGCCGCCGGCAGCCGTGCCG GTCGCGGCGACGAGCGGTGCGCAGGGCGGTGGTGCGGGTGCGCCGGCTGGCGCCAAGCCGGCGAATGCGTCGCGCGATCC GGCGATCCGCCGCGTGCGGCCGTGCGTGCAGGACGCCGCGTGCGAACACGCGCTGTTCGACCTGAACCGCTATTACCAGA AGCTGCGCCGCAAGATGCCCGCGCATTCGGCCGCGACGCTCGTGCGCGCGCAGCGCGCGTGGGTGGCGTTCCGCGATGCG ACGGCGCCGCTCGTCGGCGAGGACGGACGCGTCGACCTGATCGGTGCGCGCATCGCGACGATGAAGCGGCTGTCGGAGAC GGCCGGCAACCGGTAA
Upstream 100 bases:
>100_bases TCAACGAGCGTTTCCCGGGCTTCCACACCGACATCCACGGCCTCGTCGCGGAAGAGGTGAACGGCCGCGTCGAGTACTTC GTCGACTGCGTGCGCGACTG
Downstream 100 bases:
>100_bases AGGACGCGCCGCTTTCGAGTGGGCGACACGACGAAACGGGCACCCTCGGGTGCCCGTTTTGCATGGCGCGGCGTATTGCC TACGCGGGCCTACGCGGGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 271; Mature: 270
Protein sequence:
>271_residues MAPRGRFRTMRAALAALVVWTAGLAGLAGAGVAHAEVAAADPIDVAMRQCLARRDRSSPAGQIQCMGEAQQQWQAVMDGA YQRLSKDAPADAKRGWQDSQRRWLTWRKDEVLLLKAVYDTTRGTAYAMSSADLQLQPVRDRALALRGAADRYAPPPAAVP VAATSGAQGGGAGAPAGAKPANASRDPAIRRVRPCVQDAACEHALFDLNRYYQKLRRKMPAHSAATLVRAQRAWVAFRDA TAPLVGEDGRVDLIGARIATMKRLSETAGNR
Sequences:
>Translated_271_residues MAPRGRFRTMRAALAALVVWTAGLAGLAGAGVAHAEVAAADPIDVAMRQCLARRDRSSPAGQIQCMGEAQQQWQAVMDGA YQRLSKDAPADAKRGWQDSQRRWLTWRKDEVLLLKAVYDTTRGTAYAMSSADLQLQPVRDRALALRGAADRYAPPPAAVP VAATSGAQGGGAGAPAGAKPANASRDPAIRRVRPCVQDAACEHALFDLNRYYQKLRRKMPAHSAATLVRAQRAWVAFRDA TAPLVGEDGRVDLIGARIATMKRLSETAGNR >Mature_270_residues APRGRFRTMRAALAALVVWTAGLAGLAGAGVAHAEVAAADPIDVAMRQCLARRDRSSPAGQIQCMGEAQQQWQAVMDGAY QRLSKDAPADAKRGWQDSQRRWLTWRKDEVLLLKAVYDTTRGTAYAMSSADLQLQPVRDRALALRGAADRYAPPPAAVPV AATSGAQGGGAGAPAGAKPANASRDPAIRRVRPCVQDAACEHALFDLNRYYQKLRRKMPAHSAATLVRAQRAWVAFRDAT APLVGEDGRVDLIGARIATMKRLSETAGNR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29079; Mature: 28948
Theoretical pI: Translated: 10.98; Mature: 10.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAPRGRFRTMRAALAALVVWTAGLAGLAGAGVAHAEVAAADPIDVAMRQCLARRDRSSPA CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHCCCCCC GQIQCMGEAQQQWQAVMDGAYQRLSKDAPADAKRGWQDSQRRWLTWRKDEVLLLKAVYDT CEEEECHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCHHHHHHHCEECCCCEEEHHHHHHC TRGTAYAMSSADLQLQPVRDRALALRGAADRYAPPPAAVPVAATSGAQGGGAGAPAGAKP CCCCEEEECCCCEEEEEHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCC ANASRDPAIRRVRPCVQDAACEHALFDLNRYYQKLRRKMPAHSAATLVRAQRAWVAFRDA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHECCC TAPLVGEDGRVDLIGARIATMKRLSETAGNR CCCCCCCCCCEEEHHHHHHHHHHHHHHCCCC >Mature Secondary Structure APRGRFRTMRAALAALVVWTAGLAGLAGAGVAHAEVAAADPIDVAMRQCLARRDRSSPA CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHCCCCCC GQIQCMGEAQQQWQAVMDGAYQRLSKDAPADAKRGWQDSQRRWLTWRKDEVLLLKAVYDT CEEEECHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCHHHHHHHCEECCCCEEEHHHHHHC TRGTAYAMSSADLQLQPVRDRALALRGAADRYAPPPAAVPVAATSGAQGGGAGAPAGAKP CCCCEEEECCCCEEEEEHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCC ANASRDPAIRRVRPCVQDAACEHALFDLNRYYQKLRRKMPAHSAATLVRAQRAWVAFRDA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHECCC TAPLVGEDGRVDLIGARIATMKRLSETAGNR CCCCCCCCCCEEEHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA