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The map label for this gene is yhbQ [C]

Identifier: 116690436

GI number: 116690436

Start: 2679605

End: 2680504

Strand: Direct

Name: yhbQ [C]

Synonym: Bcen2424_2416

Alternate gene names: 116690436

Gene position: 2679605-2680504 (Clockwise)

Preceding gene: 116690435

Following gene: 116690438

Centisome position: 76.91

GC content: 66.89

Gene sequence:

>900_bases
ATGTCCTGGTTTCTGTATCTGATCGAATGCGCCGACGACAGCGTCTACACGGGCATCACGACCGATGTCGCCGCGCGCTT
CGACGAACACGCGTCCGGCAAGGGCGCGCGCTACACGCGCTCGCGCAAGCCGCGCGCGGTGCTCGCGTCGTTTGCGCTGC
CCGACCGGTCGAGCGCGTCGCGCGCCGAATACTGGGTGAAGCGGCTCACGCCCGCGAAAAAGCGCGAGCTGGCGGCTGGG
TTGCGCACGCTGGAATCGGTGTTGCCGGTGGTGGTCGCGCTCGACGAGGCCGGCGACACGGCCGGGACGAAGGCCACGGC
GCGCGGGCGGAAGAAGGAGAAGGCGGAAATCGTCGACGATGCGGCGACGGCGGCTGCAACGGAACAGGTTGCCGGGAAAA
AGGTGAAGGCCGGGAAAGTTGTCGGGGCCGCAACGGCCGCGAAGACGGCGAAGCCCACAGAGGGCACCCCAGCGTCGAAG
TCGAAGTCGAAGTCGAAGTCGAAGTCGAAGTCGAAGTCGAAGTCGAAGTCGAAGTCGACGAAATCAAATCAAGCTGCACC
GGACGCGCAACGTGCAAAAGCCGACGGCAATGCTGCCGCAAAAAAGACCACGTCGCGTAGCGCACCGGTAAAGAAAACCG
GCTCGCACTCTTCCACGCCGTCAAAAAGGAAGGCGCCGACCACTGCCGGCAAACCCGGCGCGAGCGTACGCGAAGCGGCC
GCTTCCGCACCGGCCCGGCGCCGTCCAGCGGCCAAGAAAGCCGCCGCCGCGATCGCTCCGTCCGTTGCCCCGCCCAGAAC
GAAACGCGCGAAGAAAGCGCCGGCTGTCCCGCCCGCGCCCGTCTCCCCGTCCGCTCGCCCGAAAACCGCACGCGCAAAAC
AAAACCGCGCGGCCTCCTGA

Upstream 100 bases:

>100_bases
GGCGCGGCGCCGAGCCGCTTTCGCGACGGGCACGGCGACCGGTGGCGTTGACGCCCGTTTTTTCTGAGACACTGGCGGCT
TCGCATCCCGCCGCCCCGCC

Downstream 100 bases:

>100_bases
GGAGACACGCGCGGTTTGCGTTCCGTACGAACCGGCCGTCGGCCGGCACGCCGCTTACTTCTTGTAGTTCGCGGCGCCGT
CGGTGATTTCCTTGTGCGCG

Product: excinuclease ABC subunit C

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 299; Mature: 298

Protein sequence:

>299_residues
MSWFLYLIECADDSVYTGITTDVAARFDEHASGKGARYTRSRKPRAVLASFALPDRSSASRAEYWVKRLTPAKKRELAAG
LRTLESVLPVVVALDEAGDTAGTKATARGRKKEKAEIVDDAATAAATEQVAGKKVKAGKVVGAATAAKTAKPTEGTPASK
SKSKSKSKSKSKSKSKSKSTKSNQAAPDAQRAKADGNAAAKKTTSRSAPVKKTGSHSSTPSKRKAPTTAGKPGASVREAA
ASAPARRRPAAKKAAAAIAPSVAPPRTKRAKKAPAVPPAPVSPSARPKTARAKQNRAAS

Sequences:

>Translated_299_residues
MSWFLYLIECADDSVYTGITTDVAARFDEHASGKGARYTRSRKPRAVLASFALPDRSSASRAEYWVKRLTPAKKRELAAG
LRTLESVLPVVVALDEAGDTAGTKATARGRKKEKAEIVDDAATAAATEQVAGKKVKAGKVVGAATAAKTAKPTEGTPASK
SKSKSKSKSKSKSKSKSKSTKSNQAAPDAQRAKADGNAAAKKTTSRSAPVKKTGSHSSTPSKRKAPTTAGKPGASVREAA
ASAPARRRPAAKKAAAAIAPSVAPPRTKRAKKAPAVPPAPVSPSARPKTARAKQNRAAS
>Mature_298_residues
SWFLYLIECADDSVYTGITTDVAARFDEHASGKGARYTRSRKPRAVLASFALPDRSSASRAEYWVKRLTPAKKRELAAGL
RTLESVLPVVVALDEAGDTAGTKATARGRKKEKAEIVDDAATAAATEQVAGKKVKAGKVVGAATAAKTAKPTEGTPASKS
KSKSKSKSKSKSKSKSKSTKSNQAAPDAQRAKADGNAAAKKTTSRSAPVKKTGSHSSTPSKRKAPTTAGKPGASVREAAA
SAPARRRPAAKKAAAAIAPSVAPPRTKRAKKAPAVPPAPVSPSARPKTARAKQNRAAS

Specific function: Unknown

COG id: COG2827

COG function: function code L; Predicted endonuclease containing a URI domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0213 family [H]

Homologues:

Organism=Escherichia coli, GI1789545, Length=77, Percent_Identity=51.9480519480519, Blast_Score=81, Evalue=9e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000305 [H]

Pfam domain/function: PF01541 GIY-YIG [H]

EC number: NA

Molecular weight: Translated: 30890; Mature: 30759

Theoretical pI: Translated: 11.54; Mature: 11.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.3 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSWFLYLIECADDSVYTGITTDVAARFDEHASGKGARYTRSRKPRAVLASFALPDRSSAS
CCEEEEEEEECCCCEECCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCCHH
RAEYWVKRLTPAKKRELAAGLRTLESVLPVVVALDEAGDTAGTKATARGRKKEKAEIVDD
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCHHHHHHHHHH
AATAAATEQVAGKKVKAGKVVGAATAAKTAKPTEGTPASKSKSKSKSKSKSKSKSKSKST
HHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC
KSNQAAPDAQRAKADGNAAAKKTTSRSAPVKKTGSHSSTPSKRKAPTTAGKPGASVREAA
CCCCCCCCHHHHHCCCCHHHHHCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCHHHHHHH
ASAPARRRPAAKKAAAAIAPSVAPPRTKRAKKAPAVPPAPVSPSARPKTARAKQNRAAS
HCCCHHCCCHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHCCCCC
>Mature Secondary Structure 
SWFLYLIECADDSVYTGITTDVAARFDEHASGKGARYTRSRKPRAVLASFALPDRSSAS
CEEEEEEEECCCCEECCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCCHH
RAEYWVKRLTPAKKRELAAGLRTLESVLPVVVALDEAGDTAGTKATARGRKKEKAEIVDD
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCHHHHHHHHHH
AATAAATEQVAGKKVKAGKVVGAATAAKTAKPTEGTPASKSKSKSKSKSKSKSKSKSKST
HHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC
KSNQAAPDAQRAKADGNAAAKKTTSRSAPVKKTGSHSSTPSKRKAPTTAGKPGASVREAA
CCCCCCCCHHHHHCCCCHHHHHCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCHHHHHHH
ASAPARRRPAAKKAAAAIAPSVAPPRTKRAKKAPAVPPAPVSPSARPKTARAKQNRAAS
HCCCHHCCCHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA