| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is mdmC [H]
Identifier: 116690400
GI number: 116690400
Start: 2646299
End: 2647075
Strand: Reverse
Name: mdmC [H]
Synonym: Bcen2424_2380
Alternate gene names: 116690400
Gene position: 2647075-2646299 (Counterclockwise)
Preceding gene: 116690401
Following gene: 116690398
Centisome position: 75.98
GC content: 59.33
Gene sequence:
>777_bases ATGGCGGATAGCGGTCGCTGGAAACGCCGTCTACGTGATCAATCTCGTCAAGGAATGCACTTGGTTTCTACCACCCACGC TCTTTTGCAACGGCTTCATGAAGAGAGCCAGCGCGAAATCATCGCCCGCGCACGCGCGCAGTTTCAGGGGCCGAACGAGG CGTTTCCGACGCTCGTCGACGAATACGAAGCACTCGCTCCGAGGTTGCGAGGGCGGTTTCTCGAAACGTTCGGCTTGTTC ACCGAAGATTTCGAGTCATCGGCAGGCAGTGCTTTATCGTTGGCCGTATCGGCGGAAACGGGAAGGTTCTTGCGCAACAT GGTGCTCGCGCAACGGCCGACCAGAATCCTCGAACTCGGCAGTTCGTGCGGCGTGTCGACTTTGTATTTCGCCGACGCGT TGCGCACGCTGGGCCGTGGCGTGGTCATCGCGACCGAATGCGATGCGCTCAAGTGCGCGCGTTTGCGGGCTCATGTCGAA GCTGCGGGTCTGGATGCCTATGTCGACTTGAGGGAAGGCGATGTGTTCGAGACGGTTGCCGCGCTGGATGGGACCGTCGA CATGGTGTTTATCGATGTCTGGGCCGACGCCTATCTGAAGCTGTTCAAGCAGATCGAGCGCTTGCTGCGGCCGGGATCGG TCGTGCTGGCTGACAACATGTACACGGCCGAGGACGCCGTTCGACCTTACAAGCGCTACCTCAACGAGGATCCGCGGTTT TCGACCACGACGCTGGATTTTGAGTCGGGGGTTGAGTTTACGGTTGTCGTGGCTTGA
Upstream 100 bases:
>100_bases CTTTGCGTGACGGCGTGCCCTGAACGCGCGATTACGCTTGCTCGACTGGCATAGCGTCACCCGTGTTTGCTGATGATGGA GTGATAGCGCCGCAGGCCTG
Downstream 100 bases:
>100_bases GGGGAGTTTCTTGTGAATCCGGAGGCATGGAGACTTGGCTGGTCCCGACAGAATTCATGCGTCAATGGCAGCGGGGAATT GCGGACGGGTTTTGGAAATT
Product: O-methyltransferase family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 258; Mature: 257
Protein sequence:
>258_residues MADSGRWKRRLRDQSRQGMHLVSTTHALLQRLHEESQREIIARARAQFQGPNEAFPTLVDEYEALAPRLRGRFLETFGLF TEDFESSAGSALSLAVSAETGRFLRNMVLAQRPTRILELGSSCGVSTLYFADALRTLGRGVVIATECDALKCARLRAHVE AAGLDAYVDLREGDVFETVAALDGTVDMVFIDVWADAYLKLFKQIERLLRPGSVVLADNMYTAEDAVRPYKRYLNEDPRF STTTLDFESGVEFTVVVA
Sequences:
>Translated_258_residues MADSGRWKRRLRDQSRQGMHLVSTTHALLQRLHEESQREIIARARAQFQGPNEAFPTLVDEYEALAPRLRGRFLETFGLF TEDFESSAGSALSLAVSAETGRFLRNMVLAQRPTRILELGSSCGVSTLYFADALRTLGRGVVIATECDALKCARLRAHVE AAGLDAYVDLREGDVFETVAALDGTVDMVFIDVWADAYLKLFKQIERLLRPGSVVLADNMYTAEDAVRPYKRYLNEDPRF STTTLDFESGVEFTVVVA >Mature_257_residues ADSGRWKRRLRDQSRQGMHLVSTTHALLQRLHEESQREIIARARAQFQGPNEAFPTLVDEYEALAPRLRGRFLETFGLFT EDFESSAGSALSLAVSAETGRFLRNMVLAQRPTRILELGSSCGVSTLYFADALRTLGRGVVIATECDALKCARLRAHVEA AGLDAYVDLREGDVFETVAALDGTVDMVFIDVWADAYLKLFKQIERLLRPGSVVLADNMYTAEDAVRPYKRYLNEDPRFS TTTLDFESGVEFTVVVA
Specific function: 4-O-methyltransferase for the lactone ring of midecamycin and other macrolide antibiotics [H]
COG id: COG4122
COG function: function code R; Predicted O-methyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methyltransferase superfamily. Type 3 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002935 [H]
Pfam domain/function: PF01596 Methyltransf_3 [H]
EC number: NA
Molecular weight: Translated: 28848; Mature: 28717
Theoretical pI: Translated: 5.22; Mature: 5.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADSGRWKRRLRDQSRQGMHLVSTTHALLQRLHEESQREIIARARAQFQGPNEAFPTLVD CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH EYEALAPRLRGRFLETFGLFTEDFESSAGSALSLAVSAETGRFLRNMVLAQRPTRILELG HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHHHHCCHHHHHCC SSCGVSTLYFADALRTLGRGVVIATECDALKCARLRAHVEAAGLDAYVDLREGDVFETVA CCCCHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHH ALDGTVDMVFIDVWADAYLKLFKQIERLLRPGSVVLADNMYTAEDAVRPYKRYLNEDPRF HHCCCHHEEHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHCCCCCCC STTTLDFESGVEFTVVVA CEEEEECCCCCCEEEEEC >Mature Secondary Structure ADSGRWKRRLRDQSRQGMHLVSTTHALLQRLHEESQREIIARARAQFQGPNEAFPTLVD CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH EYEALAPRLRGRFLETFGLFTEDFESSAGSALSLAVSAETGRFLRNMVLAQRPTRILELG HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHHHHCCHHHHHCC SSCGVSTLYFADALRTLGRGVVIATECDALKCARLRAHVEAAGLDAYVDLREGDVFETVA CCCCHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHH ALDGTVDMVFIDVWADAYLKLFKQIERLLRPGSVVLADNMYTAEDAVRPYKRYLNEDPRF HHCCCHHEEHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHCCCCCCC STTTLDFESGVEFTVVVA CEEEEECCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1629172 [H]