Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

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The map label for this gene is 116690344

Identifier: 116690344

GI number: 116690344

Start: 2585806

End: 2587635

Strand: Direct

Name: 116690344

Synonym: Bcen2424_2323

Alternate gene names: NA

Gene position: 2585806-2587635 (Clockwise)

Preceding gene: 116690342

Following gene: 116690345

Centisome position: 74.22

GC content: 69.67

Gene sequence:

>1830_bases
ATGCCCGCCCTGATCGAAGACTACGCCCTCGTCGGCGACGGCCACACGGCCGCGCTGATCGCAAAAGACGGCTCCGTCGA
CTGGCTGTGCTGGCCCCGCTTCGATTCGGGCGCCTGCTTCGCGGCGCTGCTCGGCACGCCCGAGCACGGCCGCTGGTTGC
TTGCTCCGGCCGCCGACGCCGCGATCACGCACACGACCCGCCGCTATCGCGGCGACACGCTGATTCTCGAGACCGATTAC
GAAAGCGCCGACGGCGCCGTCACCGTGATCGACTTCATGCCGCCCGGCAACGGCTGGTCCGAACTGGTGCGGATCGTCGT
CGGCCGCCACGGCAAGATGAAGATGCGCATGGAACTCGTGTTGCGCTTCGACTACGGTTTCTCGATTCCGTGGGTCACGC
AACTGACCCGCGAGGACGGCATGAAGGCCATCGCCGGCCCCGATACCGTCGTGCTGCGCACGCCGGTGCCGCTCACCGGC
AAGAACCTCCACACGCTCGCGGAATTCACGGTCGGCGCCGACGAGCGCGTGCCGTTCTCGCTCGGCTACGCGGCGTCGCA
CATGCGGCTGCCGCCCGCGCGCGATCCGCTGTCGATGCTCGCGCGCACCGAGAACTACTGGCTCGAATGGTCGGGCCGCT
GTCAGGTGCAGGGCCGCTACGCGGCCGCCGTGCGCCGCTCGCTGATCACGCTGAAGGCGCTCGCGTACGAGCCGACCGGC
GGCATCGTCGCCGCGCCGACCACGTCGCTGCCGGAGAAGATCGGCGGCAACCGCAACTGGGACTACCGCTACTGCTGGCT
GCGCGACGCGACGATCACGCTGCTCGCGCTGATGCGCGGCGGCTACTACGACGAGGCGCGTGCGTGGCGCACGTGGCTCG
GCCGCGTGATGGCCGGCTCGCCCGAGCAGATCCAGATCATGTACGGAATCGCCGGCGAGCGCCGGCTGCCGGAAATGGAG
CTCGACTGGCTGCCCGGCTACCAGGACTCGCTGCCGGTGCGCGTCGGCAACGGCGCCGCGAACCAGCTCCAGCTCGACGT
GTTCGGCGAGGTGATGGCCGCGCTGCACCTTGCGCGCGTGGGCGGCCTGCAGGCCGACGACACGGTCTGGTCCGTGCAGT
GCGCGCTGCTCGATCACCTCGAGAAGATCTGGCAGGAACCCGACGAAGGCATCTGGGAAACGCGCGGCGGCCGTCGCCAT
TTCACGTTCTCGAAGGTGATGGCGTGGGTCGCGTTCGACCGCGCGATCAAGTCGGCGGAGATGTTCCGGCTGCCCGGCTC
GCTCGACCGCTGGCGCGCGCTGCGCGAGCAGATCCATGCGGACGTCTGCGCCAACGCATGGCACGAAGGCAAGCAGGCGT
TCGCGCAGAGCTACGGCAGCGACGAGCTCGACGCAAGCGTGCTGCTGCTGCCGCAGCTCGGCTTCCTGCCGCCGGAAGAC
CCGCGCATCGTCGGCACGGTCGAGGCGATCGAACGGGAATTGCTGCACGACGGGCTCGTGATGCGCTACCGCACGACCGA
ATACGACGACGGCCTGCCGCCGGGCGAAGGCACGTTTCTCGCGTGCAGCTTCTGGCTGGTCGACAGCTATGCGCTGCTCG
GCCGGATCGACGACGCGCATCGGCTCTTCAGCCGCCTGCTCGCGCTGTCGAACGACCTCGGGCTGCTCGCGGAGGAATAC
GACCCGGTCGCCGGGCGGCTCGTCGGCAACTTCCCGCAGGCGTTCTCGCACGTGGCGCTCGTGCACACCGCGATGAACCT
GATGCACCATGAAGACGCGATGGCGCGCGCGGCCGGCCAGCCCGCGCCGGCCGTGGCTACGGGCCGCTGA

Upstream 100 bases:

>100_bases
CCGCCGCCCGGCCGAGTATACGGGGCGCGGCGCCCGCGCGTGAAGTCGAGGGCGTCGACGTCCGCATTGTGAAACTCGAA
TACCCAAGGATCGCCTGCCC

Downstream 100 bases:

>100_bases
ACGGCGCGCGCGGGCCTTGTTCAGAGATCGTCAAATCGCAACACTTTGATGAAAACCCGGGGAAATGTTGCATTGCACCA
CCGATCGTTGTCCGATATGA

Product: glycoside hydrolase 15-related

Products: NA

Alternate protein names: Glycosyl Hydrolase; Glycosyl Hydrolase Family; Glycosy Hydrolase Family Protein; Glycoside Hydrolase Family; Trehalose-Phosphatase; Glucoamylase; Glycoside Hydrolase Family Protein; Glucoamylase-Like Glycosyl Hydrolase; Trehalose Phosphatase; Trehalose-Phosphatase/Glycoside Hydrolase; Glycosyl Hydrolase Glucoamylase; Trehalose-Phosphatase/ Glycoside Hydrolase; Glucoamylase Or Related Glycosyl Hydrolase Protein; Glucoamylase Or Related Glycosyl Hydrolase; HAD Family Hydrolase; Six-Hairpin Glycosidase-Like Protein; Hydrolase; Glycosyl Hydrolase Glycosyl Hydrolase Family; Trehalose 6-Phosphatase; Glycosyl Hydrolase Protein; Trehalose-6-Phosphate Phophatase

Number of amino acids: Translated: 609; Mature: 608

Protein sequence:

>609_residues
MPALIEDYALVGDGHTAALIAKDGSVDWLCWPRFDSGACFAALLGTPEHGRWLLAPAADAAITHTTRRYRGDTLILETDY
ESADGAVTVIDFMPPGNGWSELVRIVVGRHGKMKMRMELVLRFDYGFSIPWVTQLTREDGMKAIAGPDTVVLRTPVPLTG
KNLHTLAEFTVGADERVPFSLGYAASHMRLPPARDPLSMLARTENYWLEWSGRCQVQGRYAAAVRRSLITLKALAYEPTG
GIVAAPTTSLPEKIGGNRNWDYRYCWLRDATITLLALMRGGYYDEARAWRTWLGRVMAGSPEQIQIMYGIAGERRLPEME
LDWLPGYQDSLPVRVGNGAANQLQLDVFGEVMAALHLARVGGLQADDTVWSVQCALLDHLEKIWQEPDEGIWETRGGRRH
FTFSKVMAWVAFDRAIKSAEMFRLPGSLDRWRALREQIHADVCANAWHEGKQAFAQSYGSDELDASVLLLPQLGFLPPED
PRIVGTVEAIERELLHDGLVMRYRTTEYDDGLPPGEGTFLACSFWLVDSYALLGRIDDAHRLFSRLLALSNDLGLLAEEY
DPVAGRLVGNFPQAFSHVALVHTAMNLMHHEDAMARAAGQPAPAVATGR

Sequences:

>Translated_609_residues
MPALIEDYALVGDGHTAALIAKDGSVDWLCWPRFDSGACFAALLGTPEHGRWLLAPAADAAITHTTRRYRGDTLILETDY
ESADGAVTVIDFMPPGNGWSELVRIVVGRHGKMKMRMELVLRFDYGFSIPWVTQLTREDGMKAIAGPDTVVLRTPVPLTG
KNLHTLAEFTVGADERVPFSLGYAASHMRLPPARDPLSMLARTENYWLEWSGRCQVQGRYAAAVRRSLITLKALAYEPTG
GIVAAPTTSLPEKIGGNRNWDYRYCWLRDATITLLALMRGGYYDEARAWRTWLGRVMAGSPEQIQIMYGIAGERRLPEME
LDWLPGYQDSLPVRVGNGAANQLQLDVFGEVMAALHLARVGGLQADDTVWSVQCALLDHLEKIWQEPDEGIWETRGGRRH
FTFSKVMAWVAFDRAIKSAEMFRLPGSLDRWRALREQIHADVCANAWHEGKQAFAQSYGSDELDASVLLLPQLGFLPPED
PRIVGTVEAIERELLHDGLVMRYRTTEYDDGLPPGEGTFLACSFWLVDSYALLGRIDDAHRLFSRLLALSNDLGLLAEEY
DPVAGRLVGNFPQAFSHVALVHTAMNLMHHEDAMARAAGQPAPAVATGR
>Mature_608_residues
PALIEDYALVGDGHTAALIAKDGSVDWLCWPRFDSGACFAALLGTPEHGRWLLAPAADAAITHTTRRYRGDTLILETDYE
SADGAVTVIDFMPPGNGWSELVRIVVGRHGKMKMRMELVLRFDYGFSIPWVTQLTREDGMKAIAGPDTVVLRTPVPLTGK
NLHTLAEFTVGADERVPFSLGYAASHMRLPPARDPLSMLARTENYWLEWSGRCQVQGRYAAAVRRSLITLKALAYEPTGG
IVAAPTTSLPEKIGGNRNWDYRYCWLRDATITLLALMRGGYYDEARAWRTWLGRVMAGSPEQIQIMYGIAGERRLPEMEL
DWLPGYQDSLPVRVGNGAANQLQLDVFGEVMAALHLARVGGLQADDTVWSVQCALLDHLEKIWQEPDEGIWETRGGRRHF
TFSKVMAWVAFDRAIKSAEMFRLPGSLDRWRALREQIHADVCANAWHEGKQAFAQSYGSDELDASVLLLPQLGFLPPEDP
RIVGTVEAIERELLHDGLVMRYRTTEYDDGLPPGEGTFLACSFWLVDSYALLGRIDDAHRLFSRLLALSNDLGLLAEEYD
PVAGRLVGNFPQAFSHVALVHTAMNLMHHEDAMARAAGQPAPAVATGR

Specific function: Unknown

COG id: COG3387

COG function: function code G; Glucoamylase and related glycosyl hydrolases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 67627; Mature: 67496

Theoretical pI: Translated: 5.60; Mature: 5.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPALIEDYALVGDGHTAALIAKDGSVDWLCWPRFDSGACFAALLGTPEHGRWLLAPAADA
CCCCCCCEEEECCCCEEEEEEECCCEEEEEECCCCCCCEEEEEECCCCCCCEEEECCCCH
AITHTTRRYRGDTLILETDYESADGAVTVIDFMPPGNGWSELVRIVVGRHGKMKMRMELV
HHHHHHHHHCCCEEEEEECCCCCCCCEEEEEECCCCCCHHHHHHHHHCCCCCEEEEEEEE
LRFDYGFSIPWVTQLTREDGMKAIAGPDTVVLRTPVPLTGKNLHTLAEFTVGADERVPFS
EEECCCCCCCHHHHHHHHCCCEEECCCCEEEEECCCCCCCCCHHHHHHHCCCCCCCCCEE
LGYAASHMRLPPARDPLSMLARTENYWLEWSGRCQVQGRYAAAVRRSLITLKALAYEPTG
ECCCHHCCCCCCCCCHHHHHHCCCCEEEEECCEEEECCHHHHHHHHHHHHHHHEEECCCC
GIVAAPTTSLPEKIGGNRNWDYRYCWLRDATITLLALMRGGYYDEARAWRTWLGRVMAGS
CEEECCCCCCHHHHCCCCCCCEEEEEEECHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC
PEQIQIMYGIAGERRLPEMELDWLPGYQDSLPVRVGNGAANQLQLDVFGEVMAALHLARV
CCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCEEEHHHHHHHHHHHHHHHH
GGLQADDTVWSVQCALLDHLEKIWQEPDEGIWETRGGRRHFTFSKVMAWVAFDRAIKSAE
CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCEEEHHHHHHHHHHHHHHHHHHH
MFRLPGSLDRWRALREQIHADVCANAWHEGKQAFAQSYGSDELDASVLLLPQLGFLPPED
HEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCC
PRIVGTVEAIERELLHDGLVMRYRTTEYDDGLPPGEGTFLACSFWLVDSYALLGRIDDAH
CCEEEHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCEEEEEHHHHHHHHHHHCCCHHH
RLFSRLLALSNDLGLLAEEYDPVAGRLVGNFPQAFSHVALVHTAMNLMHHEDAMARAAGQ
HHHHHHHHHCCCCCHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PAPAVATGR
CCCCCCCCC
>Mature Secondary Structure 
PALIEDYALVGDGHTAALIAKDGSVDWLCWPRFDSGACFAALLGTPEHGRWLLAPAADA
CCCCCCEEEECCCCEEEEEEECCCEEEEEECCCCCCCEEEEEECCCCCCCEEEECCCCH
AITHTTRRYRGDTLILETDYESADGAVTVIDFMPPGNGWSELVRIVVGRHGKMKMRMELV
HHHHHHHHHCCCEEEEEECCCCCCCCEEEEEECCCCCCHHHHHHHHHCCCCCEEEEEEEE
LRFDYGFSIPWVTQLTREDGMKAIAGPDTVVLRTPVPLTGKNLHTLAEFTVGADERVPFS
EEECCCCCCCHHHHHHHHCCCEEECCCCEEEEECCCCCCCCCHHHHHHHCCCCCCCCCEE
LGYAASHMRLPPARDPLSMLARTENYWLEWSGRCQVQGRYAAAVRRSLITLKALAYEPTG
ECCCHHCCCCCCCCCHHHHHHCCCCEEEEECCEEEECCHHHHHHHHHHHHHHHEEECCCC
GIVAAPTTSLPEKIGGNRNWDYRYCWLRDATITLLALMRGGYYDEARAWRTWLGRVMAGS
CEEECCCCCCHHHHCCCCCCCEEEEEEECHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC
PEQIQIMYGIAGERRLPEMELDWLPGYQDSLPVRVGNGAANQLQLDVFGEVMAALHLARV
CCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCEEEHHHHHHHHHHHHHHHH
GGLQADDTVWSVQCALLDHLEKIWQEPDEGIWETRGGRRHFTFSKVMAWVAFDRAIKSAE
CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCEEEHHHHHHHHHHHHHHHHHHH
MFRLPGSLDRWRALREQIHADVCANAWHEGKQAFAQSYGSDELDASVLLLPQLGFLPPED
HEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCC
PRIVGTVEAIERELLHDGLVMRYRTTEYDDGLPPGEGTFLACSFWLVDSYALLGRIDDAH
CCEEEHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCEEEEEHHHHHHHHHHHCCCHHH
RLFSRLLALSNDLGLLAEEYDPVAGRLVGNFPQAFSHVALVHTAMNLMHHEDAMARAAGQ
HHHHHHHHHCCCCCHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PAPAVATGR
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA