| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116690333
Identifier: 116690333
GI number: 116690333
Start: 2567717
End: 2568811
Strand: Reverse
Name: 116690333
Synonym: Bcen2424_2312
Alternate gene names: NA
Gene position: 2568811-2567717 (Counterclockwise)
Preceding gene: 116690334
Following gene: 116690332
Centisome position: 73.73
GC content: 69.41
Gene sequence:
>1095_bases ATGACCATGGCCAATGGGAACCCGACGCAGCGGATCCTCGTGATCCGGATTGATTTTCTGGGCGACATGCTGTGCACGAC GGCGTTTCTCCGCGCGCTGAAGGCGCGCTGGCCGGGCGCGGAGCTGCATGTGGTCGCGAACCGCTACAACGCGGCCGCGC TGGCCGGAAACCCGGACGTGCACACGATCCACACCTACGTGTACAGCCGCCAGTGCGAGCGCAACGACCGTCCCGGGCGG ATGCGCGCATTCTTCGACCGGCTGCGACTCGTGCGCCGCCTGCGCCGCTTGCGGTTCGACCTCGTGATCGTGCCGAACGG CGGCATGCATCGCAGCAGCATGCAGTTCGCGCGCCAGCTTCGCGCGAAGGATTGCCGCTGGCACGATGCCGAGACCGAAT TCGACGATCGCAAGCCCGAGCATGTCGCGCAGCGGCCGATGTGCCACGAGGCGTTGTCGGGTTTCCGTTTGGTGCCCGAA CTCGGCTGCGCCGATCTCGACGGTCTCGAACTGTCGGTCCATCCCGATCGTGCGCGACAGGAAGCGTGGCATCGCCTGCT CGGCGCGCGCACGAAGCCGCGCGTCGGGCTGTTCGTGTCGAACAAGGCGGTCGAGCGCCGCTGGCCCGCCGACCGCTGGC GCGACCTCGGCGAGCGGCTTGCCCCCGTCGCGGATGTGATCGTGTTTCGCGATCCGGCCATCGGTCAGGCCATCGAGGGC GAGGGATGGCGCGACGTGAATGCGCGGCATGTCGCGCCGTCGTCGGTCGCCGATCTCGTGGCTGCCGCGAGCCTGCTCGA TGCAATCGTCTCGGCCGACAGCGCGCCCGTCCATCTTGCGTCGGCGCTCGGCGTACCGGTGGCCGCCCTGTTCGAGGACC GTCCCGAGAAATACCTGCGCTGGCATCCGATAGGCGTGCCGCACGTGATCCTGCGCGCGGGTCGGACCGTTGATGCGATC GGTGTCGATACGGTCGAGCGTGCGGTGCGCCACCTGCTGTCGCAGGCCGGCCAACGCGACGAAGCGCCGGCCGCCGCGGC GCGCGTGCAGCCGGCCGCCGCCACGGCGCCCACGATCGCGACGATCGCTTCGTAG
Upstream 100 bases:
>100_bases GCGGATCGATGCGGCGTGCGGCGACCTGCGGCAGGGCAGGCCCGCGGATCAGGATGCCGTGGAACGGCCCGTCGCGACGA TAAAAACGGATTGTCACCAC
Downstream 100 bases:
>100_bases CGCGGCACGAACGGCCCGCTCGCGTACCGCGCGACACGTCACGATCGGGCCGCATCGTGGCCGCTTCCATCGCCGGCGCG CGACGCCGCGCCGGCTGCTG
Product: glycosyl transferase family protein
Products: NA
Alternate protein names: Sugar Transferase; ADP-Heptose
Number of amino acids: Translated: 364; Mature: 363
Protein sequence:
>364_residues MTMANGNPTQRILVIRIDFLGDMLCTTAFLRALKARWPGAELHVVANRYNAAALAGNPDVHTIHTYVYSRQCERNDRPGR MRAFFDRLRLVRRLRRLRFDLVIVPNGGMHRSSMQFARQLRAKDCRWHDAETEFDDRKPEHVAQRPMCHEALSGFRLVPE LGCADLDGLELSVHPDRARQEAWHRLLGARTKPRVGLFVSNKAVERRWPADRWRDLGERLAPVADVIVFRDPAIGQAIEG EGWRDVNARHVAPSSVADLVAAASLLDAIVSADSAPVHLASALGVPVAALFEDRPEKYLRWHPIGVPHVILRAGRTVDAI GVDTVERAVRHLLSQAGQRDEAPAAAARVQPAAATAPTIATIAS
Sequences:
>Translated_364_residues MTMANGNPTQRILVIRIDFLGDMLCTTAFLRALKARWPGAELHVVANRYNAAALAGNPDVHTIHTYVYSRQCERNDRPGR MRAFFDRLRLVRRLRRLRFDLVIVPNGGMHRSSMQFARQLRAKDCRWHDAETEFDDRKPEHVAQRPMCHEALSGFRLVPE LGCADLDGLELSVHPDRARQEAWHRLLGARTKPRVGLFVSNKAVERRWPADRWRDLGERLAPVADVIVFRDPAIGQAIEG EGWRDVNARHVAPSSVADLVAAASLLDAIVSADSAPVHLASALGVPVAALFEDRPEKYLRWHPIGVPHVILRAGRTVDAI GVDTVERAVRHLLSQAGQRDEAPAAAARVQPAAATAPTIATIAS >Mature_363_residues TMANGNPTQRILVIRIDFLGDMLCTTAFLRALKARWPGAELHVVANRYNAAALAGNPDVHTIHTYVYSRQCERNDRPGRM RAFFDRLRLVRRLRRLRFDLVIVPNGGMHRSSMQFARQLRAKDCRWHDAETEFDDRKPEHVAQRPMCHEALSGFRLVPEL GCADLDGLELSVHPDRARQEAWHRLLGARTKPRVGLFVSNKAVERRWPADRWRDLGERLAPVADVIVFRDPAIGQAIEGE GWRDVNARHVAPSSVADLVAAASLLDAIVSADSAPVHLASALGVPVAALFEDRPEKYLRWHPIGVPHVILRAGRTVDAIG VDTVERAVRHLLSQAGQRDEAPAAAARVQPAAATAPTIATIAS
Specific function: Unknown
COG id: COG0859
COG function: function code M; ADP-heptose:LPS heptosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40436; Mature: 40305
Theoretical pI: Translated: 10.09; Mature: 10.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMANGNPTQRILVIRIDFLGDMLCTTAFLRALKARWPGAELHVVANRYNAAALAGNPDV CCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEECCCCCC HTIHTYVYSRQCERNDRPGRMRAFFDRLRLVRRLRRLRFDLVIVPNGGMHRSSMQFARQL EEHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHH RAKDCRWHDAETEFDDRKPEHVAQRPMCHEALSGFRLVPELGCADLDGLELSVHPDRARQ HHHCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHCCEECHHCCCCCCCCCEEEECCCHHHH EAWHRLLGARTKPRVGLFVSNKAVERRWPADRWRDLGERLAPVADVIVFRDPAIGQAIEG HHHHHHHCCCCCCCEEEEECCCHHHHCCCHHHHHHHHHHHHHHHHHHEECCCCCCCCCCC EGWRDVNARHVAPSSVADLVAAASLLDAIVSADSAPVHLASALGVPVAALFEDRPEKYLR CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHCCCHHHHE WHPIGVPHVILRAGRTVDAIGVDTVERAVRHLLSQAGQRDEAPAAAARVQPAAATAPTIA ECCCCHHHHHHHCCCCEECCCHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCCHH TIAS HHCC >Mature Secondary Structure TMANGNPTQRILVIRIDFLGDMLCTTAFLRALKARWPGAELHVVANRYNAAALAGNPDV CCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEECCCCCC HTIHTYVYSRQCERNDRPGRMRAFFDRLRLVRRLRRLRFDLVIVPNGGMHRSSMQFARQL EEHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHH RAKDCRWHDAETEFDDRKPEHVAQRPMCHEALSGFRLVPELGCADLDGLELSVHPDRARQ HHHCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHCCEECHHCCCCCCCCCEEEECCCHHHH EAWHRLLGARTKPRVGLFVSNKAVERRWPADRWRDLGERLAPVADVIVFRDPAIGQAIEG HHHHHHHCCCCCCCEEEEECCCHHHHCCCHHHHHHHHHHHHHHHHHHEECCCCCCCCCCC EGWRDVNARHVAPSSVADLVAAASLLDAIVSADSAPVHLASALGVPVAALFEDRPEKYLR CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHCCCHHHHE WHPIGVPHVILRAGRTVDAIGVDTVERAVRHLLSQAGQRDEAPAAAARVQPAAATAPTIA ECCCCHHHHHHHCCCCEECCCHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCCHH TIAS HHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA