| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116690330
Identifier: 116690330
GI number: 116690330
Start: 2564005
End: 2564847
Strand: Direct
Name: 116690330
Synonym: Bcen2424_2309
Alternate gene names: NA
Gene position: 2564005-2564847 (Clockwise)
Preceding gene: 116690329
Following gene: 116690331
Centisome position: 73.6
GC content: 65.6
Gene sequence:
>843_bases ATGTTCTCCATCATCATTCCGACCTGGAACAACCTGCCGTACCTCAAGCTCGTCGTCGACAGCCTGCGCCGGCACTCCGC GTACGACCACCAGATCATCGTGCACGTGAACGACGGCTCGGACGGCACGCTCGACTGGGTGCGCAACGAAGGGATCGAGC ACACCGCGTCGCCGGCCAACATCGGCATCTGCCATGCGGTCAACCTGGCCGCCGCGCGGGCCACGCGCGACTACGTCGTC TACATGAACGACGACATGTTCTGCTGCCCGGGCTGGGACACGGCGCTCGTGCGCCGCATCGAACAGATGCCGACCGACCT GTTCATGCTGTCGGGCACGATGATCGAGCCGGTCGACACACGCAATCCGTGCGTGGTCGTCAGCAATTTCGGCCGCGACG CCGAGCAATTCGACGCGGCCGGCCTGGTCGCCGCGACCCCGAAGCTGGCACGCCCGGACTGGCTCGGCTCGACCTGGCCG CCGACGCTCGTGCACCGCGACTGGTGGAACCGCATCGGCGGCTACAGCAGCGAGCTGTCGCCGGGCATGAGCAGCGACAA CGACTTCTCGATGAAATTCTGGGACGCCGGGTGCCGGATCTTCATCGGCGTCGGCGACAGCCTCGTGTACCACTTCCAGC AGAAGAGCACCGGCAAGATCGTCAAGAACGACGGCCGCCGCCAGTTCCTGAACAAATGGGGCATGACCCAGGCGACGTTC GATCGCTACTACCTGCATCGCGGCGAGCCGGTCGGCACGCAGATCGCGCTCGATACGCCGGCTGTGGAAGGCCGCCTCAA ACGCGCGCTGTTGCGCTCGCGGATCAAGCGCGCATTCAGCTGA
Upstream 100 bases:
>100_bases GGCCCGGCGTTACAATGCCGGGTTGCGCGCACCGCCCATGCCCGCCCGAGCGGCTGCGCCGCGCGCCGCCCGCCACGACG ACCACCGAATTCCGACCACC
Downstream 100 bases:
>100_bases TCCGGCCCCGAAAACCGCACGGAAAGCCGTCCTGCTTCGCGTATACTGCGCCGTTCGTCCCGGCTCTCTCGCCGGGATGC GCAACGCGGCACGGTGCACG
Product: glycosyl transferase family protein
Products: NA
Alternate protein names: Group 2 Family Glycosyltransferase; Glycosyl Transferase Family 2 Protein; Glycosyl Transferase
Number of amino acids: Translated: 280; Mature: 280
Protein sequence:
>280_residues MFSIIIPTWNNLPYLKLVVDSLRRHSAYDHQIIVHVNDGSDGTLDWVRNEGIEHTASPANIGICHAVNLAAARATRDYVV YMNDDMFCCPGWDTALVRRIEQMPTDLFMLSGTMIEPVDTRNPCVVVSNFGRDAEQFDAAGLVAATPKLARPDWLGSTWP PTLVHRDWWNRIGGYSSELSPGMSSDNDFSMKFWDAGCRIFIGVGDSLVYHFQQKSTGKIVKNDGRRQFLNKWGMTQATF DRYYLHRGEPVGTQIALDTPAVEGRLKRALLRSRIKRAFS
Sequences:
>Translated_280_residues MFSIIIPTWNNLPYLKLVVDSLRRHSAYDHQIIVHVNDGSDGTLDWVRNEGIEHTASPANIGICHAVNLAAARATRDYVV YMNDDMFCCPGWDTALVRRIEQMPTDLFMLSGTMIEPVDTRNPCVVVSNFGRDAEQFDAAGLVAATPKLARPDWLGSTWP PTLVHRDWWNRIGGYSSELSPGMSSDNDFSMKFWDAGCRIFIGVGDSLVYHFQQKSTGKIVKNDGRRQFLNKWGMTQATF DRYYLHRGEPVGTQIALDTPAVEGRLKRALLRSRIKRAFS >Mature_280_residues MFSIIIPTWNNLPYLKLVVDSLRRHSAYDHQIIVHVNDGSDGTLDWVRNEGIEHTASPANIGICHAVNLAAARATRDYVV YMNDDMFCCPGWDTALVRRIEQMPTDLFMLSGTMIEPVDTRNPCVVVSNFGRDAEQFDAAGLVAATPKLARPDWLGSTWP PTLVHRDWWNRIGGYSSELSPGMSSDNDFSMKFWDAGCRIFIGVGDSLVYHFQQKSTGKIVKNDGRRQFLNKWGMTQATF DRYYLHRGEPVGTQIALDTPAVEGRLKRALLRSRIKRAFS
Specific function: Unknown
COG id: COG0463
COG function: function code M; Glycosyltransferases involved in cell wall biogenesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31627; Mature: 31627
Theoretical pI: Translated: 7.92; Mature: 7.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFSIIIPTWNNLPYLKLVVDSLRRHSAYDHQIIVHVNDGSDGTLDWVRNEGIEHTASPAN CEEEEEECCCCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHCCCCCCCCCCCC IGICHAVNLAAARATRDYVVYMNDDMFCCPGWDTALVRRIEQMPTDLFMLSGTMIEPVDT CEEEHHHHHHHHHCCCCEEEEECCCEEEECCCCHHHHHHHHHCCCCEEEECCCEECCCCC RNPCVVVSNFGRDAEQFDAAGLVAATPKLARPDWLGSTWPPTLVHRDWWNRIGGYSSELS CCCEEEEECCCCCHHHHCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCC PGMSSDNDFSMKFWDAGCRIFIGVGDSLVYHFQQKSTGKIVKNDGRRQFLNKWGMTQATF CCCCCCCCCEEEEECCCCEEEEECCCCEEEEECCCCCCCEEECCCHHHHHHHHCCCHHHH DRYYLHRGEPVGTQIALDTPAVEGRLKRALLRSRIKRAFS HHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MFSIIIPTWNNLPYLKLVVDSLRRHSAYDHQIIVHVNDGSDGTLDWVRNEGIEHTASPAN CEEEEEECCCCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHCCCCCCCCCCCC IGICHAVNLAAARATRDYVVYMNDDMFCCPGWDTALVRRIEQMPTDLFMLSGTMIEPVDT CEEEHHHHHHHHHCCCCEEEEECCCEEEECCCCHHHHHHHHHCCCCEEEECCCEECCCCC RNPCVVVSNFGRDAEQFDAAGLVAATPKLARPDWLGSTWPPTLVHRDWWNRIGGYSSELS CCCEEEEECCCCCHHHHCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCC PGMSSDNDFSMKFWDAGCRIFIGVGDSLVYHFQQKSTGKIVKNDGRRQFLNKWGMTQATF CCCCCCCCCEEEEECCCCEEEEECCCCEEEEECCCCCCCEEECCCHHHHHHHHCCCHHHH DRYYLHRGEPVGTQIALDTPAVEGRLKRALLRSRIKRAFS HHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA