| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
Click here to switch to the map view.
The map label for this gene is kdpA [H]
Identifier: 116690309
GI number: 116690309
Start: 2544207
End: 2546012
Strand: Reverse
Name: kdpA [H]
Synonym: Bcen2424_2288
Alternate gene names: 116690309
Gene position: 2546012-2544207 (Counterclockwise)
Preceding gene: 116690310
Following gene: 116690308
Centisome position: 73.08
GC content: 67.61
Gene sequence:
>1806_bases ATGAACGCGAACAACCTGTTGCAGATGGTGCTGTTCATCGTCGTGCTGCTGGCGGCGGCCGTACCGGTCGCGCGCTACCT GAGCGCGGTGATGGACGGCAGCTCGCGCGTCGTGCGCGTGTTCGGGCCGCTCGAACGCGCGCTGTACCGCATCGCCGGCG TCGATGCGGGCACCGAAATGAACTGGAAGCAGTACACGGTCGCGACGATTGCATTCAACGCGCTCGGCGTGCTGTTCCTT TATGCGCTGCTGCGCCTGCAGGGCTTCCTGCCCGGCAACCCGCAGCAGTTCGGCGCAATGACGCCCGACGGCGCGTTCAA CACGGCCGTCAGTTTCGTCGCCAACACGAACTGGCAGGACTACACGCCCGAGCAGACCGTCAGCTATCTGTCGCAGATGC TCGGCCTGACGGTGCAGAACTTCCTGTCGGCGGCGACCGGCATCGTCGTCGTGATCGTGCTGATTCGCGGCTTCGCGCGC CACACCGCGCAGACGATCGGCAACTTCTGGGTCGATCTCACGCGCGTGACGCTGTACGTGCTCGTGCCGATGGCGGCGCT CGTCGCCGCGCTGCTGATGAGCCAGGGCGTGCTGCAGAACATGAAGGCGTACCAGGACGTGCCGGTGCTGCAGGCGAGCA CCTATGCGGCGCCGAAGCTCGACGCGCACGGCAACCCGGTGAAGGACGACAAGGGTAACGTGGTCACGGCGCCGACCCCG CTCACGAAGCAGACCCTCGCGATGGGCCCGGTCGCGTCGCAGGAAGCGATCAAGATGCTCGGCACCAACGGCGGCGGCTT CTTCAACGCGAACTCCGCACACCCGTACGAGAACCCGACGCCGTTCGCGAACTTCATCGAGATCTTCGCGATCCTGATCA TCCCGGCCGCGCTGTGCCTGGTATTCGGCCGCATGATCGGCGACCGCCGGCAGGGCATCGCGGTGCTCGCGGCGATGACG GTCGCGTTCGCGGTCGCGACCGGCGTCGAGGTGAACGCCGAGCAGGGCGGCAACCCGACGCTTGCGGCGCTGCACGTCGA CCAGTCGGCGAGCACGCTGCAGCCGGGCGGCAACATGGAAGGCAAGGAAACGCGCTTCGGGATCGCGCAGACCGGCATCT TCACTGTCGCGACCACGGCCGCGTCGTGCGGCGCGGTCGACGCGATGCACGATTCGCTGACGCCGGTCGGCGGCCTCGTG CCGATGCTGCTGATGCAGCTCGGCGAGGTGGTCTTCGGCGGCGTCGGTTCCGGCCTTTACGGGATGCTCGTGTTCGCGCT GCTCGCGGTGTTCGTCGCCGGCCTGATGATCGGCCGCACGCCGGAATACGTCGGCAAGAAGATCGAATCGTACGAGATGA AGATGGTGTCGATCGTCGTGCTGCTCACGCCGCTGCTCGTGCTGGTCGGCACGTCGATCGCGGTGCTGGCGGACGCGGGC AAGGCCGGCATCGCGAACCCGGGCCCGCACGGCTTCTCGGAAATCCTCTATGCGTTCAGCTCGGCCGCGAACAACAACGG CAGCGCGTTCGCGGGCCTGACGGTCGGCACGCCGTTCTACAACTGGATGACTGCGATCGCGATGTGGTTCGGCCGCTTCG GCACGATCGTGCCGGTGCTGGCGATCGCAGGCTCGCTCGCCGCGAAGAAGCGCATCGCGGTGACGAGCGGCACGCTGCCG ACCCACGGCCCGCTGTTCGTCGTGCTGCTGCTCGGCACCGTGCTGCTGGTGGGCGCGCTGACCTACGTGCCGGCGCTCGC GCTCGGCCCGGGCGTCGAGCACCTGATGATGTGGCTGGGCGCGTGA
Upstream 100 bases:
>100_bases GGGGGGCGGGCATGACCTGGATGCTTTGGCTGGCGGGCGCCTCGACGGCCCTGCTGTTCGCGTATCTCGTCTTTGCGCTG CTGCGCGCGGAGGATATCGA
Downstream 100 bases:
>100_bases CGCGCGCCCGCATGGCGACACATTGAAAAGACTGAAGAGCTTGAAGAGATCGCAATGACTCAACATTCCGCAACACGGTC CATGTTCGATCCGGCGCTGC
Product: potassium-transporting ATPase subunit A
Products: NA
Alternate protein names: ATP phosphohydrolase [potassium-transporting] A chain; Potassium-binding and translocating subunit A; Potassium-translocating ATPase A chain [H]
Number of amino acids: Translated: 601; Mature: 601
Protein sequence:
>601_residues MNANNLLQMVLFIVVLLAAAVPVARYLSAVMDGSSRVVRVFGPLERALYRIAGVDAGTEMNWKQYTVATIAFNALGVLFL YALLRLQGFLPGNPQQFGAMTPDGAFNTAVSFVANTNWQDYTPEQTVSYLSQMLGLTVQNFLSAATGIVVVIVLIRGFAR HTAQTIGNFWVDLTRVTLYVLVPMAALVAALLMSQGVLQNMKAYQDVPVLQASTYAAPKLDAHGNPVKDDKGNVVTAPTP LTKQTLAMGPVASQEAIKMLGTNGGGFFNANSAHPYENPTPFANFIEIFAILIIPAALCLVFGRMIGDRRQGIAVLAAMT VAFAVATGVEVNAEQGGNPTLAALHVDQSASTLQPGGNMEGKETRFGIAQTGIFTVATTAASCGAVDAMHDSLTPVGGLV PMLLMQLGEVVFGGVGSGLYGMLVFALLAVFVAGLMIGRTPEYVGKKIESYEMKMVSIVVLLTPLLVLVGTSIAVLADAG KAGIANPGPHGFSEILYAFSSAANNNGSAFAGLTVGTPFYNWMTAIAMWFGRFGTIVPVLAIAGSLAAKKRIAVTSGTLP THGPLFVVLLLGTVLLVGALTYVPALALGPGVEHLMMWLGA
Sequences:
>Translated_601_residues MNANNLLQMVLFIVVLLAAAVPVARYLSAVMDGSSRVVRVFGPLERALYRIAGVDAGTEMNWKQYTVATIAFNALGVLFL YALLRLQGFLPGNPQQFGAMTPDGAFNTAVSFVANTNWQDYTPEQTVSYLSQMLGLTVQNFLSAATGIVVVIVLIRGFAR HTAQTIGNFWVDLTRVTLYVLVPMAALVAALLMSQGVLQNMKAYQDVPVLQASTYAAPKLDAHGNPVKDDKGNVVTAPTP LTKQTLAMGPVASQEAIKMLGTNGGGFFNANSAHPYENPTPFANFIEIFAILIIPAALCLVFGRMIGDRRQGIAVLAAMT VAFAVATGVEVNAEQGGNPTLAALHVDQSASTLQPGGNMEGKETRFGIAQTGIFTVATTAASCGAVDAMHDSLTPVGGLV PMLLMQLGEVVFGGVGSGLYGMLVFALLAVFVAGLMIGRTPEYVGKKIESYEMKMVSIVVLLTPLLVLVGTSIAVLADAG KAGIANPGPHGFSEILYAFSSAANNNGSAFAGLTVGTPFYNWMTAIAMWFGRFGTIVPVLAIAGSLAAKKRIAVTSGTLP THGPLFVVLLLGTVLLVGALTYVPALALGPGVEHLMMWLGA >Mature_601_residues MNANNLLQMVLFIVVLLAAAVPVARYLSAVMDGSSRVVRVFGPLERALYRIAGVDAGTEMNWKQYTVATIAFNALGVLFL YALLRLQGFLPGNPQQFGAMTPDGAFNTAVSFVANTNWQDYTPEQTVSYLSQMLGLTVQNFLSAATGIVVVIVLIRGFAR HTAQTIGNFWVDLTRVTLYVLVPMAALVAALLMSQGVLQNMKAYQDVPVLQASTYAAPKLDAHGNPVKDDKGNVVTAPTP LTKQTLAMGPVASQEAIKMLGTNGGGFFNANSAHPYENPTPFANFIEIFAILIIPAALCLVFGRMIGDRRQGIAVLAAMT VAFAVATGVEVNAEQGGNPTLAALHVDQSASTLQPGGNMEGKETRFGIAQTGIFTVATTAASCGAVDAMHDSLTPVGGLV PMLLMQLGEVVFGGVGSGLYGMLVFALLAVFVAGLMIGRTPEYVGKKIESYEMKMVSIVVLLTPLLVLVGTSIAVLADAG KAGIANPGPHGFSEILYAFSSAANNNGSAFAGLTVGTPFYNWMTAIAMWFGRFGTIVPVLAIAGSLAAKKRIAVTSGTLP THGPLFVVLLLGTVLLVGALTYVPALALGPGVEHLMMWLGA
Specific function: One of the components of the high-affinity ATP-driven potassium transport (or KDP) system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions [H]
COG id: COG2060
COG function: function code P; K+-transporting ATPase, A chain
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the kdpA family [H]
Homologues:
Organism=Escherichia coli, GI1786915, Length=600, Percent_Identity=55.6666666666667, Blast_Score=640, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004623 [H]
Pfam domain/function: PF03814 KdpA [H]
EC number: =3.6.3.12 [H]
Molecular weight: Translated: 63007; Mature: 63007
Theoretical pI: Translated: 7.71; Mature: 7.71
Prosite motif: PS00107 PROTEIN_KINASE_ATP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNANNLLQMVLFIVVLLAAAVPVARYLSAVMDGSSRVVRVFGPLERALYRIAGVDAGTEM CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHCCCCCCCC NWKQYTVATIAFNALGVLFLYALLRLQGFLPGNPQQFGAMTPDGAFNTAVSFVANTNWQD CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCHHHHHHHHHCCCCCCC YTPEQTVSYLSQMLGLTVQNFLSAATGIVVVIVLIRGFARHTAQTIGNFWVDLTRVTLYV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVPMAALVAALLMSQGVLQNMKAYQDVPVLQASTYAAPKLDAHGNPVKDDKGNVVTAPTP HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCC LTKQTLAMGPVASQEAIKMLGTNGGGFFNANSAHPYENPTPFANFIEIFAILIIPAALCL CCHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH VFGRMIGDRRQGIAVLAAMTVAFAVATGVEVNAEQGGNPTLAALHVDQSASTLQPGGNME HHHHHHCCHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCEEEEEEECCCCCCCCCCCCCC GKETRFGIAQTGIFTVATTAASCGAVDAMHDSLTPVGGLVPMLLMQLGEVVFGGVGSGLY CCHHHCCHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHH GMLVFALLAVFVAGLMIGRTPEYVGKKIESYEMKMVSIVVLLTPLLVLVGTSIAVLADAG HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEECCC KAGIANPGPHGFSEILYAFSSAANNNGSAFAGLTVGTPFYNWMTAIAMWFGRFGTIVPVL CCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHH AIAGSLAAKKRIAVTSGTLPTHGPLFVVLLLGTVLLVGALTYVPALALGPGVEHLMMWLG HHHHHHHHHCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHC A C >Mature Secondary Structure MNANNLLQMVLFIVVLLAAAVPVARYLSAVMDGSSRVVRVFGPLERALYRIAGVDAGTEM CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHCCCCCCCC NWKQYTVATIAFNALGVLFLYALLRLQGFLPGNPQQFGAMTPDGAFNTAVSFVANTNWQD CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCHHHHHHHHHCCCCCCC YTPEQTVSYLSQMLGLTVQNFLSAATGIVVVIVLIRGFARHTAQTIGNFWVDLTRVTLYV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVPMAALVAALLMSQGVLQNMKAYQDVPVLQASTYAAPKLDAHGNPVKDDKGNVVTAPTP HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCC LTKQTLAMGPVASQEAIKMLGTNGGGFFNANSAHPYENPTPFANFIEIFAILIIPAALCL CCHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH VFGRMIGDRRQGIAVLAAMTVAFAVATGVEVNAEQGGNPTLAALHVDQSASTLQPGGNME HHHHHHCCHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCEEEEEEECCCCCCCCCCCCCC GKETRFGIAQTGIFTVATTAASCGAVDAMHDSLTPVGGLVPMLLMQLGEVVFGGVGSGLY CCHHHCCHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHH GMLVFALLAVFVAGLMIGRTPEYVGKKIESYEMKMVSIVVLLTPLLVLVGTSIAVLADAG HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEECCC KAGIANPGPHGFSEILYAFSSAANNNGSAFAGLTVGTPFYNWMTAIAMWFGRFGTIVPVL CCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHH AIAGSLAAKKRIAVTSGTLPTHGPLFVVLLLGTVLLVGALTYVPALALGPGVEHLMMWLG HHHHHHHHHCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHC A C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA