| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116690298
Identifier: 116690298
GI number: 116690298
Start: 2531514
End: 2532131
Strand: Reverse
Name: 116690298
Synonym: Bcen2424_2277
Alternate gene names: NA
Gene position: 2532131-2531514 (Counterclockwise)
Preceding gene: 116690299
Following gene: 116690286
Centisome position: 72.68
GC content: 68.93
Gene sequence:
>618_bases ATGACGGTCGATACCGGGAAAGCAGGCGTGGCGGCACTCGATCCGCAGGCACGGGAGATTCTCGATTTCTGGTTCGGCGA GCCGGGCTCGGCCGAATTCGGGCAGAACCGCAAGGTCTGGTTCAACGGCGGCGCCGCGTTCGACGACGTGCTGCGCACGC GTTATGGCGCGCTGCTCGACGCCGCGTGCGACGGCGCTTGCGATCACTGGGCCGATTCGCCGTCGGGCGCGCTGGCGTTG ATCGTCGTGCTCGACCAGTTCTCGCGCAACATCCATCGCGGCACGCCGCGCGCGTTTGCCGCCGATCCGAAAGCGCTCGC GCTCGCCCGCCGCGTCGTCGCGGCCGGCTGGGACACCCAGTTGCCGAGCGGCCATCACCGTGCGTTCGCGTATCTGCCGT TCGAGCACGACGAGTCGGTCGAGAGCCAGCGCGAGGCCGTGCGCCTGTGCGCGGGCATCCGCGACGAGGCCGGATGCGAG AGCTATCACCGCTTCGCGTTGCTGCATGCGGCGATCGTCGAGCGCTTCGGCCGCTTTCCGCACCGGAACGCGATTCTCGG TCGCGCGTCGACCGACGAGGAAACGGCGTTTCTGCGAGAGCCCGGCTCGTCGTTCTGA
Upstream 100 bases:
>100_bases GCGGCACGCATGTGCGCAACACGTCCGAAATCGGCGGGTTGCGGGTCGCGAAACTGGAAAAGAAGAGTGCGCGCACACGG CGCCTCGTACTGGAGTTTGC
Downstream 100 bases:
>100_bases CGATCCGTACGTTGGCGAGATGAGGGAACGGGGTGGCTAACGCTGGGACGCTTGCGGGTTCTGCCGGCGTCGGTATTGCA GCACAGGTTGCGCAGCGGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 205; Mature: 204
Protein sequence:
>205_residues MTVDTGKAGVAALDPQAREILDFWFGEPGSAEFGQNRKVWFNGGAAFDDVLRTRYGALLDAACDGACDHWADSPSGALAL IVVLDQFSRNIHRGTPRAFAADPKALALARRVVAAGWDTQLPSGHHRAFAYLPFEHDESVESQREAVRLCAGIRDEAGCE SYHRFALLHAAIVERFGRFPHRNAILGRASTDEETAFLREPGSSF
Sequences:
>Translated_205_residues MTVDTGKAGVAALDPQAREILDFWFGEPGSAEFGQNRKVWFNGGAAFDDVLRTRYGALLDAACDGACDHWADSPSGALAL IVVLDQFSRNIHRGTPRAFAADPKALALARRVVAAGWDTQLPSGHHRAFAYLPFEHDESVESQREAVRLCAGIRDEAGCE SYHRFALLHAAIVERFGRFPHRNAILGRASTDEETAFLREPGSSF >Mature_204_residues TVDTGKAGVAALDPQAREILDFWFGEPGSAEFGQNRKVWFNGGAAFDDVLRTRYGALLDAACDGACDHWADSPSGALALI VVLDQFSRNIHRGTPRAFAADPKALALARRVVAAGWDTQLPSGHHRAFAYLPFEHDESVESQREAVRLCAGIRDEAGCES YHRFALLHAAIVERFGRFPHRNAILGRASTDEETAFLREPGSSF
Specific function: Unknown
COG id: COG3803
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22413; Mature: 22282
Theoretical pI: Translated: 6.08; Mature: 6.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVDTGKAGVAALDPQAREILDFWFGEPGSAEFGQNRKVWFNGGAAFDDVLRTRYGALLD CCCCCCCCCCEECCHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHH AACDGACDHWADSPSGALALIVVLDQFSRNIHRGTPRAFAADPKALALARRVVAAGWDTQ HHHCCCHHHCCCCCCCCEEHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCC LPSGHHRAFAYLPFEHDESVESQREAVRLCAGIRDEAGCESYHRFALLHAAIVERFGRFP CCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCC HRNAILGRASTDEETAFLREPGSSF CCCCEECCCCCCHHHHHHCCCCCCC >Mature Secondary Structure TVDTGKAGVAALDPQAREILDFWFGEPGSAEFGQNRKVWFNGGAAFDDVLRTRYGALLD CCCCCCCCCEECCHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHH AACDGACDHWADSPSGALALIVVLDQFSRNIHRGTPRAFAADPKALALARRVVAAGWDTQ HHHCCCHHHCCCCCCCCEEHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCC LPSGHHRAFAYLPFEHDESVESQREAVRLCAGIRDEAGCESYHRFALLHAAIVERFGRFP CCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCC HRNAILGRASTDEETAFLREPGSSF CCCCEECCCCCCHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA