| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is can [H]
Identifier: 116690278
GI number: 116690278
Start: 2512156
End: 2512800
Strand: Direct
Name: can [H]
Synonym: Bcen2424_2257
Alternate gene names: 116690278
Gene position: 2512156-2512800 (Clockwise)
Preceding gene: 116690277
Following gene: 116690279
Centisome position: 72.11
GC content: 70.7
Gene sequence:
>645_bases ATGAATCGCCCCAAGAGCATGCTGGTTGCCAACATTGCCTGGGCCCGCGAGACGCGCGAACACACGCCCGGCTTTTTCGA CGCGCTCGCGCGCGGCCAGAATCCGCGCGTACTGTGGATCGGTTGCGCGGACAGCCGCGTGCCAGCCGAAACCATCACGC ACTGCGCGCCCGGCGAGCTGTTCGTCCATCGCAACATCGCGAACCTGTTCCACCCCGACGACGACAATTCCGCCAGCGTG CTCGAGTACGCGGTGCGGGTGCTGAAGGTCGACCACGTGATCGTGTGCGGTCACTACGGGTGCGGCGGCGTGCGTGCATC GCTGCTGCCGCCGCCCGCCGACCTGCCACACGTCGCGCGCCGCATCGCGCCGCTCTGCGCACTCGCGCGGCGCCATCGCG ACACGCTCGACGGGCTCGACGACATGGCCGCCGCCGACCGCCTCGCCGAGCTGAACGTGCTCGAACAGGTGCGGCTGCTG CGCGCGTCGCCGATCGTGCGCGGCCGCGAGCGGCCACCGCTCGTGCATGGCTGGATCTTTTCGCTCGCCGACGGCCGCCT GAAGGAGCTCGATTCCGGCTATGCGGCGTCGCCGACCGAAGCCGAGCCCGAGCCCGAGCGCGCTGCCGCCGTCGCGCTCG GTTGA
Upstream 100 bases:
>100_bases ACCCCTAATATCAGTCGAAAATCCAACCTTTCAATTTAGAAAGCATGCGATTGCGCCATTTCGTTCGATATTTATTTGCC TTTATCAAAAAGGAGTCCTC
Downstream 100 bases:
>100_bases CCCGCGCCCTGCCCCTCCACGCCAACGAAACCACCCCAACCATGAAACTGAACGAGCGCCTATCCACCCTGCCGCGCGAC ATCGTCGCCGGCATCGTCGT
Product: carbonate dehydratase
Products: NA
Alternate protein names: Carbonate dehydratase 2 [H]
Number of amino acids: Translated: 214; Mature: 214
Protein sequence:
>214_residues MNRPKSMLVANIAWARETREHTPGFFDALARGQNPRVLWIGCADSRVPAETITHCAPGELFVHRNIANLFHPDDDNSASV LEYAVRVLKVDHVIVCGHYGCGGVRASLLPPPADLPHVARRIAPLCALARRHRDTLDGLDDMAAADRLAELNVLEQVRLL RASPIVRGRERPPLVHGWIFSLADGRLKELDSGYAASPTEAEPEPERAAAVALG
Sequences:
>Translated_214_residues MNRPKSMLVANIAWARETREHTPGFFDALARGQNPRVLWIGCADSRVPAETITHCAPGELFVHRNIANLFHPDDDNSASV LEYAVRVLKVDHVIVCGHYGCGGVRASLLPPPADLPHVARRIAPLCALARRHRDTLDGLDDMAAADRLAELNVLEQVRLL RASPIVRGRERPPLVHGWIFSLADGRLKELDSGYAASPTEAEPEPERAAAVALG >Mature_214_residues MNRPKSMLVANIAWARETREHTPGFFDALARGQNPRVLWIGCADSRVPAETITHCAPGELFVHRNIANLFHPDDDNSASV LEYAVRVLKVDHVIVCGHYGCGGVRASLLPPPADLPHVARRIAPLCALARRHRDTLDGLDDMAAADRLAELNVLEQVRLL RASPIVRGRERPPLVHGWIFSLADGRLKELDSGYAASPTEAEPEPERAAAVALG
Specific function: Unknown
COG id: COG0288
COG function: function code P; Carbonic anhydrase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the beta-class carbonic anhydrase family [H]
Homologues:
Organism=Escherichia coli, GI1786318, Length=194, Percent_Identity=43.8144329896907, Blast_Score=166, Evalue=1e-42, Organism=Escherichia coli, GI1786534, Length=198, Percent_Identity=31.8181818181818, Blast_Score=89, Evalue=3e-19, Organism=Saccharomyces cerevisiae, GI6324292, Length=203, Percent_Identity=29.5566502463054, Blast_Score=103, Evalue=2e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001765 - InterPro: IPR015892 [H]
Pfam domain/function: PF00484 Pro_CA [H]
EC number: =4.2.1.1 [H]
Molecular weight: Translated: 23390; Mature: 23390
Theoretical pI: Translated: 7.00; Mature: 7.00
Prosite motif: PS00704 PROK_CO2_ANHYDRASE_1 ; PS00705 PROK_CO2_ANHYDRASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRPKSMLVANIAWARETREHTPGFFDALARGQNPRVLWIGCADSRVPAETITHCAPGEL CCCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCEEEEECCCCCCCHHHHHCCCCCCE FVHRNIANLFHPDDDNSASVLEYAVRVLKVDHVIVCGHYGCGGVRASLLPPPADLPHVAR EEECCHHHHCCCCCCCHHHHHHHHHHHHHHCEEEEECCCCCCCCCCCCCCCCCCHHHHHH RIAPLCALARRHRDTLDGLDDMAAADRLAELNVLEQVRLLRASPIVRGRERPPLVHGWIF HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHH SLADGRLKELDSGYAASPTEAEPEPERAAAVALG HHCCCHHHHHCCCCCCCCCCCCCCHHHHHEECCC >Mature Secondary Structure MNRPKSMLVANIAWARETREHTPGFFDALARGQNPRVLWIGCADSRVPAETITHCAPGEL CCCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCEEEEECCCCCCCHHHHHCCCCCCE FVHRNIANLFHPDDDNSASVLEYAVRVLKVDHVIVCGHYGCGGVRASLLPPPADLPHVAR EEECCHHHHCCCCCCCHHHHHHHHHHHHHHCEEEEECCCCCCCCCCCCCCCCCCHHHHHH RIAPLCALARRHRDTLDGLDDMAAADRLAELNVLEQVRLLRASPIVRGRERPPLVHGWIF HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHH SLADGRLKELDSGYAASPTEAEPEPERAAAVALG HHCCCHHHHHCCCCCCCCCCCCCCHHHHHEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8202364; 9278503; 10493123 [H]