| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116690245
Identifier: 116690245
GI number: 116690245
Start: 2480042
End: 2480539
Strand: Direct
Name: 116690245
Synonym: Bcen2424_2224
Alternate gene names: NA
Gene position: 2480042-2480539 (Clockwise)
Preceding gene: 116690242
Following gene: 116690246
Centisome position: 71.19
GC content: 70.08
Gene sequence:
>498_bases ATGACCCGCTCTCTCGCCCCGCATGCCGCACACCGCGTCGTGCTCGACTCGAACGTCTGGATCGACATTCTCGTATTCGA CGACCCCGCTACGCGCCCGATCCGTGCCGCGCTGGAGCACGGCACGCTGGCCGCCGTGATCGACGGCCGCTGCCTGACCG AACTCGAATACGTGCTCGACTATCCGCAGTTCCAGTCGCGCGCGATCGACAAAGCGGCCGCGCTCGCAACGGTCGCCCGG CTCGCGAGCCTCGTCGAGCCGCCGCCCCTCGACGCCGACGCGCCGCCGCTGCCGAAGTGCAAGGACCGCGACGACCAGAA ATTTCTCGAACTCGCCCGCGCCGCGCAGGCCGATTGGCTCGTGTCGAAAGACCGCGCGCTGCTGAAGCTCGCGAAACGCA CCGCACGCGACTTCGGTTTCCGGATCGCACAACCCGCGCCGTTTGCCGAAGCCTGCGCCCTCGACGCCGCGCCGCCCGCC ACGGCGACGCCGGCCTGA
Upstream 100 bases:
>100_bases TCTCGTAGTCGAGGGATTTGGCGGGAGAGAGAACGATTATCATAGAGGCTCGCTGGCACGCCGTGCCTTGCGGTCAGACG AAAACCACCGATTGTAACGA
Downstream 100 bases:
>100_bases CGCCCCAATCCGAATTCGACCGTATCGATGAACGCTCCTTCAGATATGCCAACGACTCCCGTTTTCCCCTCGCGCCTGCC GAACGTCGGCACGACGATCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 165; Mature: 164
Protein sequence:
>165_residues MTRSLAPHAAHRVVLDSNVWIDILVFDDPATRPIRAALEHGTLAAVIDGRCLTELEYVLDYPQFQSRAIDKAAALATVAR LASLVEPPPLDADAPPLPKCKDRDDQKFLELARAAQADWLVSKDRALLKLAKRTARDFGFRIAQPAPFAEACALDAAPPA TATPA
Sequences:
>Translated_165_residues MTRSLAPHAAHRVVLDSNVWIDILVFDDPATRPIRAALEHGTLAAVIDGRCLTELEYVLDYPQFQSRAIDKAAALATVAR LASLVEPPPLDADAPPLPKCKDRDDQKFLELARAAQADWLVSKDRALLKLAKRTARDFGFRIAQPAPFAEACALDAAPPA TATPA >Mature_164_residues TRSLAPHAAHRVVLDSNVWIDILVFDDPATRPIRAALEHGTLAAVIDGRCLTELEYVLDYPQFQSRAIDKAAALATVARL ASLVEPPPLDADAPPLPKCKDRDDQKFLELARAAQADWLVSKDRALLKLAKRTARDFGFRIAQPAPFAEACALDAAPPAT ATPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17874; Mature: 17742
Theoretical pI: Translated: 6.26; Mature: 6.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRSLAPHAAHRVVLDSNVWIDILVFDDPATRPIRAALEHGTLAAVIDGRCLTELEYVLD CCCCCCCHHHHEEEEECCCEEEEEEECCCCCHHHHHHHHCCCEEEEECCHHHHHHHHHHC YPQFQSRAIDKAAALATVARLASLVEPPPLDADAPPLPKCKDRDDQKFLELARAAQADWL CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH VSKDRALLKLAKRTARDFGFRIAQPAPFAEACALDAAPPATATPA HHCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCCCC >Mature Secondary Structure TRSLAPHAAHRVVLDSNVWIDILVFDDPATRPIRAALEHGTLAAVIDGRCLTELEYVLD CCCCCCHHHHEEEEECCCEEEEEEECCCCCHHHHHHHHCCCEEEEECCHHHHHHHHHHC YPQFQSRAIDKAAALATVARLASLVEPPPLDADAPPLPKCKDRDDQKFLELARAAQADWL CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH VSKDRALLKLAKRTARDFGFRIAQPAPFAEACALDAAPPATATPA HHCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA