| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116690236
Identifier: 116690236
GI number: 116690236
Start: 2466686
End: 2467054
Strand: Reverse
Name: 116690236
Synonym: Bcen2424_2215
Alternate gene names: NA
Gene position: 2467054-2466686 (Counterclockwise)
Preceding gene: 116690237
Following gene: 116690233
Centisome position: 70.81
GC content: 66.94
Gene sequence:
>369_bases ATGGACCTGCTTTTCATCCTGAAGGTCCCGATCATGCGTTTGTGTGTCGATGTGCGTCGCAGTGCCCGCGCGCGTCTCGT TCTGGGTGCGGTCGTGCTCGCCCATGGCCTCGCGGCCGGTGCCGCGACGTCGACCAAGCCGCTCGTTCTTGATACACAGC GCGGTATCCAGGACGGCAAGGGCGGGTTGGTATTGCAGACGGCGCCGTTGTCTTCCGAGCCGATCGTCGAGCCGGCAGGC ATGCGGGCGCCAGCCGGGCAGGCGCCGAACACGTCGGTTCCGCTGTTCGTCGCGCCATATATCAATGTTCCCGCGTGGGG CGGGCAGCCGGCCAACCAGCCCAGGCTCGCGCCGAGACCGCAGCCGTAA
Upstream 100 bases:
>100_bases AGGTGCCGCGCGGCACCGAACGATAAGCAAGCCCCGTATTGACGGGGCTTTGTTTTTTTGTGCACCGGCTCTGGCGAAAT CGTCGGTGCAGCGCTATGGT
Downstream 100 bases:
>100_bases CGACCAGTCGCCCGATCAGTTGCCGCGGTGCTCGATTTGAAAGCGGGCGCCGCTATCCTGTCCCAGCTTCTCGACCAGAT AGGGCAGGACCTCTTTCATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 122; Mature: 122
Protein sequence:
>122_residues MDLLFILKVPIMRLCVDVRRSARARLVLGAVVLAHGLAAGAATSTKPLVLDTQRGIQDGKGGLVLQTAPLSSEPIVEPAG MRAPAGQAPNTSVPLFVAPYINVPAWGGQPANQPRLAPRPQP
Sequences:
>Translated_122_residues MDLLFILKVPIMRLCVDVRRSARARLVLGAVVLAHGLAAGAATSTKPLVLDTQRGIQDGKGGLVLQTAPLSSEPIVEPAG MRAPAGQAPNTSVPLFVAPYINVPAWGGQPANQPRLAPRPQP >Mature_122_residues MDLLFILKVPIMRLCVDVRRSARARLVLGAVVLAHGLAAGAATSTKPLVLDTQRGIQDGKGGLVLQTAPLSSEPIVEPAG MRAPAGQAPNTSVPLFVAPYINVPAWGGQPANQPRLAPRPQP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12730; Mature: 12730
Theoretical pI: Translated: 11.40; Mature: 11.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLLFILKVPIMRLCVDVRRSARARLVLGAVVLAHGLAAGAATSTKPLVLDTQRGIQDGK CCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCC GGLVLQTAPLSSEPIVEPAGMRAPAGQAPNTSVPLFVAPYINVPAWGGQPANQPRLAPRP CCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCC QP CC >Mature Secondary Structure MDLLFILKVPIMRLCVDVRRSARARLVLGAVVLAHGLAAGAATSTKPLVLDTQRGIQDGK CCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCC GGLVLQTAPLSSEPIVEPAGMRAPAGQAPNTSVPLFVAPYINVPAWGGQPANQPRLAPRP CCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCC QP CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA