Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

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The map label for this gene is 116690230

Identifier: 116690230

GI number: 116690230

Start: 2459339

End: 2459890

Strand: Reverse

Name: 116690230

Synonym: Bcen2424_2209

Alternate gene names: NA

Gene position: 2459890-2459339 (Counterclockwise)

Preceding gene: 116690231

Following gene: 116690229

Centisome position: 70.61

GC content: 63.41

Gene sequence:

>552_bases
ATGTTGGGTTCTTCGTTCATCCGCACGACGGTTGCGGTAGCGGCGGCGCTTGCCGCGATGTCGGCCTCGGCTGCCGAGTA
TCCGATCGGCAAGCAGCAGATCCAGGGCGGCATGGAAATCGGCGCGGTGTATCTGCAGCCGATCACGATGGACCCGGAAG
GCATGATGCGCAAGGCGTCGGATTCCGACATTCACCTCGAGGCCGACATCCACGCGGTCAAGAACAACCCGACCGGTTTC
GCGGAAGGCGACTGGATGCCGTACCTGCAGGTCACGTACAAGCTGACGAAGCAGGGCGACACGAAGTGGAAGGCCGAAGG
CGACCTGATGGGCATGGTCGCGAGCGACGGCCCGCACTACGGCGACAACGTGAAGCTCGCCGGCCCGGGCAAGTATCACC
TGACGATGGTCGTCAAGCCGCCGATGCAGTCGGGTCACATGGCGTTCGGTCGCCACGTCGACAAGGAAACGGGCGTGGGC
CCGTGGTTCAAGCCCATCACGCTCGAGTACGACTTCCCGTTCGCCGGTATCGGCAAGAAGGGCGGTTACTGA

Upstream 100 bases:

>100_bases
TTCGCATTAACGTTCTTCGTCGCGTTAGTGTTTCCAGCGGGCGGCCCCGGCGGCGGCTCGCATGTCGTCAAGATAGTCAG
ACAAATAACAAGGAGTGTCC

Downstream 100 bases:

>100_bases
TCGGTGGCATCACGAACGGCGCGCTTCGGCGCGCCGTCGGCGTAGAGAACCCAGAATGAAAATTCCCCAGAAAATCGTTG
CCGCGGCCGCTGCGCTGTGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 183; Mature: 183

Protein sequence:

>183_residues
MLGSSFIRTTVAVAAALAAMSASAAEYPIGKQQIQGGMEIGAVYLQPITMDPEGMMRKASDSDIHLEADIHAVKNNPTGF
AEGDWMPYLQVTYKLTKQGDTKWKAEGDLMGMVASDGPHYGDNVKLAGPGKYHLTMVVKPPMQSGHMAFGRHVDKETGVG
PWFKPITLEYDFPFAGIGKKGGY

Sequences:

>Translated_183_residues
MLGSSFIRTTVAVAAALAAMSASAAEYPIGKQQIQGGMEIGAVYLQPITMDPEGMMRKASDSDIHLEADIHAVKNNPTGF
AEGDWMPYLQVTYKLTKQGDTKWKAEGDLMGMVASDGPHYGDNVKLAGPGKYHLTMVVKPPMQSGHMAFGRHVDKETGVG
PWFKPITLEYDFPFAGIGKKGGY
>Mature_183_residues
MLGSSFIRTTVAVAAALAAMSASAAEYPIGKQQIQGGMEIGAVYLQPITMDPEGMMRKASDSDIHLEADIHAVKNNPTGF
AEGDWMPYLQVTYKLTKQGDTKWKAEGDLMGMVASDGPHYGDNVKLAGPGKYHLTMVVKPPMQSGHMAFGRHVDKETGVG
PWFKPITLEYDFPFAGIGKKGGY

Specific function: Unknown

COG id: COG3470

COG function: function code P; Uncharacterized protein probably involved in high-affinity Fe2+ transport

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0423 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018470 [H]

Pfam domain/function: PF10634 Iron_transport [H]

EC number: NA

Molecular weight: Translated: 19740; Mature: 19740

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.6 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.6 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLGSSFIRTTVAVAAALAAMSASAAEYPIGKQQIQGGMEIGAVYLQPITMDPEGMMRKAS
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCEEEEEEEEEEEECHHHHHHCCC
DSDIHLEADIHAVKNNPTGFAEGDWMPYLQVTYKLTKQGDTKWKAEGDLMGMVASDGPHY
CCCEEEEEEEEEECCCCCCCCCCCCCCEEEEEEEEECCCCCEEEECCCEEEEEECCCCCC
GDNVKLAGPGKYHLTMVVKPPMQSGHMAFGRHVDKETGVGPWFKPITLEYDFPFAGIGKK
CCCEEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCCCCCCCEEEEEECCCCCCCCCC
GGY
CCC
>Mature Secondary Structure
MLGSSFIRTTVAVAAALAAMSASAAEYPIGKQQIQGGMEIGAVYLQPITMDPEGMMRKAS
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCEEEEEEEEEEEECHHHHHHCCC
DSDIHLEADIHAVKNNPTGFAEGDWMPYLQVTYKLTKQGDTKWKAEGDLMGMVASDGPHY
CCCEEEEEEEEEECCCCCCCCCCCCCCEEEEEEEEECCCCCEEEECCCEEEEEECCCCCC
GDNVKLAGPGKYHLTMVVKPPMQSGHMAFGRHVDKETGVGPWFKPITLEYDFPFAGIGKK
CCCEEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCCCCCCCEEEEEECCCCCCCCCC
GGY
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12271122 [H]