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The map label for this gene is yccM [C]

Identifier: 116690227

GI number: 116690227

Start: 2456656

End: 2458053

Strand: Reverse

Name: yccM [C]

Synonym: Bcen2424_2206

Alternate gene names: 116690227

Gene position: 2458053-2456656 (Counterclockwise)

Preceding gene: 116690228

Following gene: 116690222

Centisome position: 70.55

GC content: 67.38

Gene sequence:

>1398_bases
ATGAGCGTTGTCGCCGCCGTCAAGCCGGGCTGGCTCGCGCAGGCCGGCCAGTGGATGCAGCGCCACGGTGCGCTGATCCG
CGGTATCCAGTGGATCGTCGTCGCCGTCTACGCGTTCCTGATCATCGTGCCGGCCGTGTTGCCGCTGCCTGACGATTCCG
CGCATCTGTGGAACAACCTCACGCTCATCGCGCAATTCGCGTTCTGGGGCATCTGGTGGCCGTTCGTGCTGCTGTCGATG
GTGATGCTCGGCCGCGTGTGGTGCGGCGTGCTGTGCCCGGAGGGCGCGCTCACGGAATATGCGAGCAAGTTCGGCCGTGG
TGGCCCGATTCCGCGCTGGATCCGGTGGGGCGGCTGGCCGTTCGTCGCGTTCGGCATCACGACGATCTACGGGCAGATGG
TCAGTGTGTACCAGTACCCGCTCGCGGTGCTGTTCGTGCTCGGCGGCTCGACCGTCGGCGCGATCGTGATCGGCGTGCTG
TACGGCCGCGAGAAACGCGTGTGGTGCAAGTACCTGTGTCCGGTCAACGGCGTGTTCGGGCTGCTCGCGCGGCTCGCGCC
GATGCGCTACAAGGTCGACGAGGATGCGTGGCGCCGTTCGTACAAGAACGGCGAGCACGGCCATCGCGTGATTCCGATCA
ACTGCGCGCCGCTCGTGCCGTTGCGCAACATGAAGGGCGCGGCGGACTGCCATATGTGCGGCCGCTGCAGCGGGCACCGC
GACGCGATCTCGCTGTCGCTGCGCTCGCCGTCCGACGAAGTCGTGAACCTCGGTGCGGAGCGGGCCAACCCGTGGGACAC
CGCACTGATCCTGTACGGCCTGCTCGGCGTGGCGATCGGCGCGTTCCACTGGACCGTCAGCCCGTGGTTCGTGCAGATCA
AGCAATGGCTCGCGGGCTGGCTGATCGACCACGACATCACGTGGCCGCTCGAGACCAATGCGCCGTGGTTCCTGCTCACG
CACTACCCGGATCGCAACGACGTGTTCTCCTGGCTCGATGGCGGGCTGGTCGTCAGCTACATCGTCGGCACGGGGCTCGT
GTACGGCACGGCGCTGCTGGTGTTGCTGGCCGGCGCGACGCTGATGCTCGGCCGCTTCGATCGCGTGCGCCTGCATCACC
TCGCCCAAGCGTTGATCCCGATCGCGGGGGCGGGCGTGTTCCTCGGATTGTCGGCCACGACGCTGTCGTTGCTGCGCGCC
GAGCATGTGCCGCTCGGCTGGGCAACCGATGTGCGCATCGCAATTCTGGTCGGCGCCAACGTATGGAGTGCGTGGCTCGC
GTGGAAGGTGACGGGGCGCTATGCGGCGTGGCCGTGCCGGCTCGCGGCATTCGCATGGTTCGCCGTCGGGCTGGCGGTCG
TCGACAGCGCATGGTGGTTGATGTTCTGGGGGTTCTGA

Upstream 100 bases:

>100_bases
CGCTGACCAACCTGGTGGCCTATGCGGTGTACTGGGCGGTCGTCTGGCTGCTGATGAAGCGCGCGAGCCGCCGTCCGGCC
GTTGCAGCGGGTCGCGCGGC

Downstream 100 bases:

>100_bases
AGCGGTTCGCATGCCGCTTCCTTCGGCTGTCGTGCATTGACGCAGCCACATACATACAGGCGGCATGCTTCGCGCATTGG
CTGCCCAAACAAAAATCTAT

Product: polyferredoxin-like protein

Products: NA

Alternate protein names: Nitrogen Assimilation Regulatory Protein; Polyferredoxin; Regulatory Protein; Polyferredoxin-Like Protein; Polyferredoxin-Like; Ferredoxin; Polyferredoxin Protein; Nitrogen Regulatory Protein; Transcriptional Regulator; Sigma-54 Interaction Domain Family

Number of amino acids: Translated: 465; Mature: 464

Protein sequence:

>465_residues
MSVVAAVKPGWLAQAGQWMQRHGALIRGIQWIVVAVYAFLIIVPAVLPLPDDSAHLWNNLTLIAQFAFWGIWWPFVLLSM
VMLGRVWCGVLCPEGALTEYASKFGRGGPIPRWIRWGGWPFVAFGITTIYGQMVSVYQYPLAVLFVLGGSTVGAIVIGVL
YGREKRVWCKYLCPVNGVFGLLARLAPMRYKVDEDAWRRSYKNGEHGHRVIPINCAPLVPLRNMKGAADCHMCGRCSGHR
DAISLSLRSPSDEVVNLGAERANPWDTALILYGLLGVAIGAFHWTVSPWFVQIKQWLAGWLIDHDITWPLETNAPWFLLT
HYPDRNDVFSWLDGGLVVSYIVGTGLVYGTALLVLLAGATLMLGRFDRVRLHHLAQALIPIAGAGVFLGLSATTLSLLRA
EHVPLGWATDVRIAILVGANVWSAWLAWKVTGRYAAWPCRLAAFAWFAVGLAVVDSAWWLMFWGF

Sequences:

>Translated_465_residues
MSVVAAVKPGWLAQAGQWMQRHGALIRGIQWIVVAVYAFLIIVPAVLPLPDDSAHLWNNLTLIAQFAFWGIWWPFVLLSM
VMLGRVWCGVLCPEGALTEYASKFGRGGPIPRWIRWGGWPFVAFGITTIYGQMVSVYQYPLAVLFVLGGSTVGAIVIGVL
YGREKRVWCKYLCPVNGVFGLLARLAPMRYKVDEDAWRRSYKNGEHGHRVIPINCAPLVPLRNMKGAADCHMCGRCSGHR
DAISLSLRSPSDEVVNLGAERANPWDTALILYGLLGVAIGAFHWTVSPWFVQIKQWLAGWLIDHDITWPLETNAPWFLLT
HYPDRNDVFSWLDGGLVVSYIVGTGLVYGTALLVLLAGATLMLGRFDRVRLHHLAQALIPIAGAGVFLGLSATTLSLLRA
EHVPLGWATDVRIAILVGANVWSAWLAWKVTGRYAAWPCRLAAFAWFAVGLAVVDSAWWLMFWGF
>Mature_464_residues
SVVAAVKPGWLAQAGQWMQRHGALIRGIQWIVVAVYAFLIIVPAVLPLPDDSAHLWNNLTLIAQFAFWGIWWPFVLLSMV
MLGRVWCGVLCPEGALTEYASKFGRGGPIPRWIRWGGWPFVAFGITTIYGQMVSVYQYPLAVLFVLGGSTVGAIVIGVLY
GREKRVWCKYLCPVNGVFGLLARLAPMRYKVDEDAWRRSYKNGEHGHRVIPINCAPLVPLRNMKGAADCHMCGRCSGHRD
AISLSLRSPSDEVVNLGAERANPWDTALILYGLLGVAIGAFHWTVSPWFVQIKQWLAGWLIDHDITWPLETNAPWFLLTH
YPDRNDVFSWLDGGLVVSYIVGTGLVYGTALLVLLAGATLMLGRFDRVRLHHLAQALIPIAGAGVFLGLSATTLSLLRAE
HVPLGWATDVRIAILVGANVWSAWLAWKVTGRYAAWPCRLAAFAWFAVGLAVVDSAWWLMFWGF

Specific function: Unknown

COG id: COG0348

COG function: function code C; Polyferredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51572; Mature: 51441

Theoretical pI: Translated: 9.19; Mature: 9.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEECC
>Mature Secondary Structure 
SVVAAVKPGWLAQAGQWMQRHGALIRGIQWIVVAVYAFLIIVPAVLPLPDDSAHLWNNL
CEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
TLIAQFAFWGIWWPFVLLSMVMLGRVWCGVLCPEGALTEYASKFGRGGPIPRWIRWGGWP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHCCCCH
FVAFGITTIYGQMVSVYQYPLAVLFVLGGSTVGAIVIGVLYGREKRVWCKYLCPVNGVFG
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHEECCCCHHHHH
LLARLAPMRYKVDEDAWRRSYKNGEHGHRVIPINCAPLVPLRNMKGAADCHMCGRCSGHR
HHHHHCCCCEECCHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHCCCCCCC
DAISLSLRSPSDEVVNLGAERANPWDTALILYGLLGVAIGAFHWTVSPWFVQIKQWLAGW
CEEEEEECCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
LIDHDITWPLETNAPWFLLTHYPDRNDVFSWLDGGLVVSYIVGTGLVYGTALLVLLAGAT
HCCCCCCCCEECCCCEEEEEECCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LMLGRFDRVRLHHLAQALIPIAGAGVFLGLSATTLSLLRAEHVPLGWATDVRIAILVGAN
HHHHCHHHHHHHHHHHHHHHHHCCHHHEEHHHHHHHHHHHHCCCCCCCCCCEEEEEECCH
VWSAWLAWKVTGRYAAWPCRLAAFAWFAVGLAVVDSAWWLMFWGF
HHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA