| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116690225
Identifier: 116690225
GI number: 116690225
Start: 2454771
End: 2455016
Strand: Direct
Name: 116690225
Synonym: Bcen2424_2204
Alternate gene names: NA
Gene position: 2454771-2455016 (Clockwise)
Preceding gene: 116690224
Following gene: 116690226
Centisome position: 70.46
GC content: 65.04
Gene sequence:
>246_bases ATGACCGACACCATGCGCCCGACCACGCTGACCCTGCGCCGCACCACCAGCACCGCAGCCAGCAGCCGTCAGAAGACGGC AGCGGTCACCACGCCGGCGAAACCCGCCGGCAACCGCGATGCAGGCACGCGGGTCGTCAACAGCGATACGCTGCTGCAAG GCCATAGCCACATCAGCATCGCGCATAACGGAGAGACCTATCAGTTGCGGGCCACGCGGCTCGGCAAACTGATCCTGACG AAGTAA
Upstream 100 bases:
>100_bases TATCAGACTAGGCCTATCGATCGATAAAGAGTTTTTGTAAATGGGAATAGTTATCATTTAGAATTCATTCCATCGTATCG ACAGTCACCGATCAAACCGA
Downstream 100 bases:
>100_bases CGACCGAGTATTGTGGGGACCACCTCCCTGAGAGGTGTTGGGCAGTAGCCAGCGTAACGGCTTGCACGCGAGATCTAGAC CCCTTCGTGCAAACACACTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 81; Mature: 80
Protein sequence:
>81_residues MTDTMRPTTLTLRRTTSTAASSRQKTAAVTTPAKPAGNRDAGTRVVNSDTLLQGHSHISIAHNGETYQLRATRLGKLILT K
Sequences:
>Translated_81_residues MTDTMRPTTLTLRRTTSTAASSRQKTAAVTTPAKPAGNRDAGTRVVNSDTLLQGHSHISIAHNGETYQLRATRLGKLILT K >Mature_80_residues TDTMRPTTLTLRRTTSTAASSRQKTAAVTTPAKPAGNRDAGTRVVNSDTLLQGHSHISIAHNGETYQLRATRLGKLILTK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8717; Mature: 8586
Theoretical pI: Translated: 12.08; Mature: 12.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDTMRPTTLTLRRTTSTAASSRQKTAAVTTPAKPAGNRDAGTRVVNSDTLLQGHSHISI CCCCCCCEEEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCEEECCCEEEECCCEEEE AHNGETYQLRATRLGKLILTK EECCCEEEEEECCCCEEEECC >Mature Secondary Structure TDTMRPTTLTLRRTTSTAASSRQKTAAVTTPAKPAGNRDAGTRVVNSDTLLQGHSHISI CCCCCCEEEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCEEECCCEEEECCCEEEE AHNGETYQLRATRLGKLILTK EECCCEEEEEECCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA