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The map label for this gene is recJ [H]

Identifier: 116690137

GI number: 116690137

Start: 2348442

End: 2350139

Strand: Direct

Name: recJ [H]

Synonym: Bcen2424_2116

Alternate gene names: 116690137

Gene position: 2348442-2350139 (Clockwise)

Preceding gene: 116690136

Following gene: 116690138

Centisome position: 67.41

GC content: 71.5

Gene sequence:

>1698_bases
ATGACCCGGATCGTTACCCGCCCCGTCGCGCCCGCCGACGCCGAAGCGCTTGCGCGCCACGGTCTGCACCCCGTCCTCGC
GCGCCTGTACGCGTCGCGCGGCGTGCAGTCGCCCGTCGACATCGAGACCGCGCTCGCGCGCCTCGTGCCGCCCACCGAGC
TGAAAGGCTGCGCCGATGCGGCGGTGCTGCTCGCCGACGCGATTGCCGACAAGCGGCGCCTGCTGGTCGTCGCCGACTAC
GACTGCGACGGCGCGACCGCCTGCGCGGTCGCGGTGCGCGGCCTGCGGATGTTCGGCGCGCAGATCGACTACCTGGTGCC
GAACCGCTTCGAATACGGCTACGGCCTCACGCCCGAGATCGTCGAGCTCGCGGCCGCGCGCAAGCCCGACCTGCTGATCA
CCGTCGACAACGGGATCGCGAGCGTCGCCGGCGTCGAAGCCGCGAACGCGCGCGGCATCGACGTGCTCGTGACCGACCAC
CACCTGCCCGGCGACGCGCTGCCCGCCGCGCGCGCGATCGTCAACCCGAACCAGCCCGGCTGCGCATTCCCGAGCAAGCA
CCTCGCCGGCGTCGGCGTGATGTTCTACGTGCTGCTCGCGCTGCGCGCCGAGCTGCGCCGCCGCGGCGCGTTCGCGAGCA
AGGAAGCCGAGCCGCGCCTCGACGGCCTGCTCGACCTCGTCGCGCTCGGCACCGTCGCCGACGTCGTGCGGCTCGACGGC
AACAACCGCGTGCTGGTCGCGCAGGGGCTGCAGCGCATCCGCAACGGCCGCATGCAGCCGGGCATCGCCGCGCTGTTCCG
CGCCGCCGCGCGCGAAGCGCGCACCGCGTCGGGCTTCGACCTCGGCTTCGGCCTCGGCCCGCGCCTGAACGCCGCCGGGC
GGCTGTCCGACATGTCGCTCGGCATCGAATGCCTGATCACCGACGACATCGGCCGCGCGTGGGATCTCGCGCAGCAGCTC
GACGTGATGAACCGCGAGCGCCGCGAAATCGAGGCCGGCATGCAGCAGCAGGCGCTCGCCGATCTCGCCGACGTCGACCC
GGCCGACGCGTGCACGATCACGCTGTTCAATCCCGCGTGGCACCAGGGCGTGATCGGCATCGTCGCCGGCCGGCTCAAGG
AGAAATTCCACCGTCCGTCGTTCACGTTCGCGCACGCCGATGACGAAGGCCGACGGGTCAAAGGTTCCGGCCGATCGATC
GCCGGCTTCCACCTGCGCGACGCGCTCGACCTCGTGTCGAAGCGCGAACCGGACCTGATCGTCGCGTTCGGCGGCCACGC
GATGGCGGCCGGCCTTACGCTCGACACCGACAACGTGCCGCGCTTCGCGGCCGCGTTCGAGGCCGTCGCGCGCGAATGGC
TGTCCGACGACGCGCTGGCCCGCGTGATCGAGACCGACGGCGAACTCGAGGACGCGTACTTCACGCCGCAGTTCGTCGGC
CTGCTCGACGAAGCCGTGTGGGGGCAAGGGTTTCCGGCCCCGCTTTTCTCGGGCGAATTCGACGTCGTGTCGCAGTCGCT
CGTGAAGGAAAAGCACCTGAAGCTGCAGCTGGCGCGCGGCCGCCAGCGCTTCAACGCGATCTGGTTCAACCACACCGAGC
CGCTGCCGGCGAGCGCGCTGGTCGCGTACCGGCTCGTCGCAGATACGTGGAACGGCGTCACGCGCGTCCAGTTGATCGTC
GAACACGCGGCCGGCTGA

Upstream 100 bases:

>100_bases
ACACGAGCTCCGTGACGCTGCACGCGACGCGCGGCGATCTGCGCAAGTTCTGGCGCCGCCGCGCGCTTGCCTCCCTGTTC
GAATAACCAGCAGACCCCGA

Downstream 100 bases:

>100_bases
GCAGGCCGACCGCCCCGCGACGCGCCGCCGCACGCGTGCACGCCGCGCCGGACGGGGCCGCCGACACGCGTACGGGCACC
GTTTGCGTCACCGGGCAAGT

Product: single-stranded-DNA-specific exonuclease RecJ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 565; Mature: 564

Protein sequence:

>565_residues
MTRIVTRPVAPADAEALARHGLHPVLARLYASRGVQSPVDIETALARLVPPTELKGCADAAVLLADAIADKRRLLVVADY
DCDGATACAVAVRGLRMFGAQIDYLVPNRFEYGYGLTPEIVELAAARKPDLLITVDNGIASVAGVEAANARGIDVLVTDH
HLPGDALPAARAIVNPNQPGCAFPSKHLAGVGVMFYVLLALRAELRRRGAFASKEAEPRLDGLLDLVALGTVADVVRLDG
NNRVLVAQGLQRIRNGRMQPGIAALFRAAAREARTASGFDLGFGLGPRLNAAGRLSDMSLGIECLITDDIGRAWDLAQQL
DVMNRERREIEAGMQQQALADLADVDPADACTITLFNPAWHQGVIGIVAGRLKEKFHRPSFTFAHADDEGRRVKGSGRSI
AGFHLRDALDLVSKREPDLIVAFGGHAMAAGLTLDTDNVPRFAAAFEAVAREWLSDDALARVIETDGELEDAYFTPQFVG
LLDEAVWGQGFPAPLFSGEFDVVSQSLVKEKHLKLQLARGRQRFNAIWFNHTEPLPASALVAYRLVADTWNGVTRVQLIV
EHAAG

Sequences:

>Translated_565_residues
MTRIVTRPVAPADAEALARHGLHPVLARLYASRGVQSPVDIETALARLVPPTELKGCADAAVLLADAIADKRRLLVVADY
DCDGATACAVAVRGLRMFGAQIDYLVPNRFEYGYGLTPEIVELAAARKPDLLITVDNGIASVAGVEAANARGIDVLVTDH
HLPGDALPAARAIVNPNQPGCAFPSKHLAGVGVMFYVLLALRAELRRRGAFASKEAEPRLDGLLDLVALGTVADVVRLDG
NNRVLVAQGLQRIRNGRMQPGIAALFRAAAREARTASGFDLGFGLGPRLNAAGRLSDMSLGIECLITDDIGRAWDLAQQL
DVMNRERREIEAGMQQQALADLADVDPADACTITLFNPAWHQGVIGIVAGRLKEKFHRPSFTFAHADDEGRRVKGSGRSI
AGFHLRDALDLVSKREPDLIVAFGGHAMAAGLTLDTDNVPRFAAAFEAVAREWLSDDALARVIETDGELEDAYFTPQFVG
LLDEAVWGQGFPAPLFSGEFDVVSQSLVKEKHLKLQLARGRQRFNAIWFNHTEPLPASALVAYRLVADTWNGVTRVQLIV
EHAAG
>Mature_564_residues
TRIVTRPVAPADAEALARHGLHPVLARLYASRGVQSPVDIETALARLVPPTELKGCADAAVLLADAIADKRRLLVVADYD
CDGATACAVAVRGLRMFGAQIDYLVPNRFEYGYGLTPEIVELAAARKPDLLITVDNGIASVAGVEAANARGIDVLVTDHH
LPGDALPAARAIVNPNQPGCAFPSKHLAGVGVMFYVLLALRAELRRRGAFASKEAEPRLDGLLDLVALGTVADVVRLDGN
NRVLVAQGLQRIRNGRMQPGIAALFRAAAREARTASGFDLGFGLGPRLNAAGRLSDMSLGIECLITDDIGRAWDLAQQLD
VMNRERREIEAGMQQQALADLADVDPADACTITLFNPAWHQGVIGIVAGRLKEKFHRPSFTFAHADDEGRRVKGSGRSIA
GFHLRDALDLVSKREPDLIVAFGGHAMAAGLTLDTDNVPRFAAAFEAVAREWLSDDALARVIETDGELEDAYFTPQFVGL
LDEAVWGQGFPAPLFSGEFDVVSQSLVKEKHLKLQLARGRQRFNAIWFNHTEPLPASALVAYRLVADTWNGVTRVQLIVE
HAAG

Specific function: Single-stranded-DNA-specific exonuclease. Required for many types of recombinational events, although the stringency of the requirement for recJ appears to vary with the type of recombinational event monitored and the other recombination gene products whi

COG id: COG0608

COG function: function code L; Single-stranded DNA-specific exonuclease

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recJ family [H]

Homologues:

Organism=Escherichia coli, GI1789259, Length=554, Percent_Identity=48.9169675090253, Blast_Score=488, Evalue=1e-139,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003156
- InterPro:   IPR001667
- InterPro:   IPR004610 [H]

Pfam domain/function: PF01368 DHH; PF02272 DHHA1 [H]

EC number: 3.1.-.- [C]

Molecular weight: Translated: 60828; Mature: 60697

Theoretical pI: Translated: 6.08; Mature: 6.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRIVTRPVAPADAEALARHGLHPVLARLYASRGVQSPVDIETALARLVPPTELKGCADA
CCCEECCCCCCCCHHHHHHCCCHHHHHHHHHHCCCCCCCCHHHHHHHCCCCHHHCHHHHH
AVLLADAIADKRRLLVVADYDCDGATACAVAVRGLRMFGAQIDYLVPNRFEYGYGLTPEI
HHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCEECEECCCCCCCCCCCCHHH
VELAAARKPDLLITVDNGIASVAGVEAANARGIDVLVTDHHLPGDALPAARAIVNPNQPG
HHHHHCCCCCEEEEECCCCHHHHCCCCCCCCCCEEEEECCCCCCCCCHHHHHHCCCCCCC
CAFPSKHLAGVGVMFYVLLALRAELRRRGAFASKEAEPRLDGLLDLVALGTVADVVRLDG
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEECC
NNRVLVAQGLQRIRNGRMQPGIAALFRAAAREARTASGFDLGFGLGPRLNAAGRLSDMSL
CCEEEHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
GIECLITDDIGRAWDLAQQLDVMNRERREIEAGMQQQALADLADVDPADACTITLFNPAW
CEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCHH
HQGVIGIVAGRLKEKFHRPSFTFAHADDEGRRVKGSGRSIAGFHLRDALDLVSKREPDLI
HHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEECCCCCCEECHHHHHHHHHHHCCCCCEE
VAFGGHAMAAGLTLDTDNVPRFAAAFEAVAREWLSDDALARVIETDGELEDAYFTPQFVG
EEECCCEEEECEEECCCCCCHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCCCHHHHH
LLDEAVWGQGFPAPLFSGEFDVVSQSLVKEKHLKLQLARGRQRFNAIWFNHTEPLPASAL
HHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCHHHH
VAYRLVADTWNGVTRVQLIVEHAAG
HHHHHHHHCCCCHHHHHHHHHHCCC
>Mature Secondary Structure 
TRIVTRPVAPADAEALARHGLHPVLARLYASRGVQSPVDIETALARLVPPTELKGCADA
CCEECCCCCCCCHHHHHHCCCHHHHHHHHHHCCCCCCCCHHHHHHHCCCCHHHCHHHHH
AVLLADAIADKRRLLVVADYDCDGATACAVAVRGLRMFGAQIDYLVPNRFEYGYGLTPEI
HHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCEECEECCCCCCCCCCCCHHH
VELAAARKPDLLITVDNGIASVAGVEAANARGIDVLVTDHHLPGDALPAARAIVNPNQPG
HHHHHCCCCCEEEEECCCCHHHHCCCCCCCCCCEEEEECCCCCCCCCHHHHHHCCCCCCC
CAFPSKHLAGVGVMFYVLLALRAELRRRGAFASKEAEPRLDGLLDLVALGTVADVVRLDG
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEECC
NNRVLVAQGLQRIRNGRMQPGIAALFRAAAREARTASGFDLGFGLGPRLNAAGRLSDMSL
CCEEEHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
GIECLITDDIGRAWDLAQQLDVMNRERREIEAGMQQQALADLADVDPADACTITLFNPAW
CEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCHH
HQGVIGIVAGRLKEKFHRPSFTFAHADDEGRRVKGSGRSIAGFHLRDALDLVSKREPDLI
HHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEECCCCCCEECHHHHHHHHHHHCCCCCEE
VAFGGHAMAAGLTLDTDNVPRFAAAFEAVAREWLSDDALARVIETDGELEDAYFTPQFVG
EEECCCEEEECEEECCCCCCHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCCCHHHHH
LLDEAVWGQGFPAPLFSGEFDVVSQSLVKEKHLKLQLARGRQRFNAIWFNHTEPLPASAL
HHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCHHHH
VAYRLVADTWNGVTRVQLIVEHAAG
HHHHHHHHCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on ester bonds [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8168497 [H]