Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

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The map label for this gene is 116690107

Identifier: 116690107

GI number: 116690107

Start: 2316000

End: 2317622

Strand: Direct

Name: 116690107

Synonym: Bcen2424_2086

Alternate gene names: NA

Gene position: 2316000-2317622 (Clockwise)

Preceding gene: 116690106

Following gene: 116690109

Centisome position: 66.48

GC content: 66.54

Gene sequence:

>1623_bases
ATGTTACGGCTAAGCGAAATTAAACTCCCCCTCGACCACCCCGAGAGCGCGCTCGAGGCCGCGATTCGCGCGCGCCTCGC
GGAGCTCGGCGTGGCGCCAGACGAACTGCTCCGTTACACCGTGTTCCGCCGCGCGCACGACGCGCGCAAGCGTGCCGACA
TCAAGCTCACGTATATCGTCGATATCGAAGTCAAGGACGAAGCGGCCGCGCTCAAGCGCATCGCCGGCAAGCCGCATTGC
GGCGTGACGCCCGACATGGCGTACCACTTCGTCACGAAGGCGCCCGAACACGCCGACTTCCTGCGCCCGGTCGTCATCGG
CATGGGGCCGTGCGGACTGTTCGCGGGGCTGATCCTCGCGCAGATGGGGTTCCGTCCCATCATCCTCGAACGCGGCAAGG
CCGTGCGCGAGCGCACCAAGGACACCTTCGGCCTGTGGCGCAAGAGCGTGCTCAATCCCGAATCCAACGTGCAGTTCGGC
GAAGGCGGCGCGGGGACGTTTTCCGACGGCAAGCTGTACAGCCAGATCAAGGATCCGAACCACTATGGCCGCAAGGTGCT
GGACGAATTCGTCAAGGCCGGCGCGCCCGAGGACATCCTGTACCTGAGCCGCCCGCACATCGGCACCTTCCGCCTCGTCA
GCATGGTGGAAAAAATGCGCGCGTCGATCCACGAACTCGGTGGCGAAGTGCGTTTCGAAACCCGCGTCGACGACATCGAA
ATCGACCAGGGCAAGGTGCGCGCGCTCAAGCTGTCGAACGGCGAAACGCTGCGGTGCGACCGCGTGGTGCTGGCCGTGGG
CCACAGCGCGCGCGACACGTTCCAGATGCTGCACGACCGCGGCGTCTATATCGAAGCGAAACCGTTCTCGCTCGGTTTCC
GCATCGAGCATCCGCAGGGGCTGATCGATCGCAGCCGCTTCGGCAAGTTCGCGGGCCACAAGCAGCTCGGCGCGGCCGAC
TACAAGGTGGTCCACCACTGCAGCAACGGGCGCGCGGTCTACAGCTTCTGCATGTGCCCGGGCGGCACGGTGGTCGCCGC
GACCTCGGAGCCGGGTCGCGTGGTCACCAACGGGATGAGCCAGTATTCCCGCGCGGAGCGCAACGCGAATGCGGGCATCG
TCGTCGGCATCACGCCGGACGATTATCCGGGCGGCCCGCTCGCCGGCATCGCGTTCCAGCGCAAATGGGAAGAACGCGCG
TTCGAGCTCGGCGGCGGTGACTACCGCGCGCCGGGGCAGCTGGTCGGCGATTTCATCGCGGGCCGGCCGTCGACGTCGCT
GGGCTCGGTGGAGCCGTCGTACAAGCCCGGCGTGAATCCGACCGACCTCAGTACCGCACTGCCGGACTACGTGATCGAAG
CGATCCGCGAAGCGCTGCCCGAGATCGACAAGAAGATCGCCGGCTTCGCGATGCACGACGCCGTGCTCACCGGCGTGGAG
ACGCGCACGTCGTCGCCGATCCGGATTCGACGCAAGGACGACTACCAGAGCATGAACGTCGAAGGCCTGTATCCGGCCGG
CGAAGGCGCGGGATATGCGGGCGGCATCTATTCGGCGGCGATCGACGGCATCGAAGTCGCGCAGGCGGTGGCGCTCAGTC
TGACGTCGGGGCACGCGTCCTGA

Upstream 100 bases:

>100_bases
TTGCGTCCGGCATGCCCGCGCGGCGAACAACGCCGCCGGGGTGCCGGCCCCGCCTGTATCAACACCGCCACGGCGCCGTG
GCAATCGCATCCGAGTCCCC

Downstream 100 bases:

>100_bases
CCTGCGGCGCAGGGTCGGGGCGCGCAGGTGCGTGACCTGAGCGCCGCCGGCCTGCCCCGCCGTGGCTTCATGGACGCTTC
ATTCGTGGCTCGACGCACGG

Product: FAD dependent oxidoreductase

Products: NA

Alternate protein names: ORF1 [H]

Number of amino acids: Translated: 540; Mature: 540

Protein sequence:

>540_residues
MLRLSEIKLPLDHPESALEAAIRARLAELGVAPDELLRYTVFRRAHDARKRADIKLTYIVDIEVKDEAAALKRIAGKPHC
GVTPDMAYHFVTKAPEHADFLRPVVIGMGPCGLFAGLILAQMGFRPIILERGKAVRERTKDTFGLWRKSVLNPESNVQFG
EGGAGTFSDGKLYSQIKDPNHYGRKVLDEFVKAGAPEDILYLSRPHIGTFRLVSMVEKMRASIHELGGEVRFETRVDDIE
IDQGKVRALKLSNGETLRCDRVVLAVGHSARDTFQMLHDRGVYIEAKPFSLGFRIEHPQGLIDRSRFGKFAGHKQLGAAD
YKVVHHCSNGRAVYSFCMCPGGTVVAATSEPGRVVTNGMSQYSRAERNANAGIVVGITPDDYPGGPLAGIAFQRKWEERA
FELGGGDYRAPGQLVGDFIAGRPSTSLGSVEPSYKPGVNPTDLSTALPDYVIEAIREALPEIDKKIAGFAMHDAVLTGVE
TRTSSPIRIRRKDDYQSMNVEGLYPAGEGAGYAGGIYSAAIDGIEVAQAVALSLTSGHAS

Sequences:

>Translated_540_residues
MLRLSEIKLPLDHPESALEAAIRARLAELGVAPDELLRYTVFRRAHDARKRADIKLTYIVDIEVKDEAAALKRIAGKPHC
GVTPDMAYHFVTKAPEHADFLRPVVIGMGPCGLFAGLILAQMGFRPIILERGKAVRERTKDTFGLWRKSVLNPESNVQFG
EGGAGTFSDGKLYSQIKDPNHYGRKVLDEFVKAGAPEDILYLSRPHIGTFRLVSMVEKMRASIHELGGEVRFETRVDDIE
IDQGKVRALKLSNGETLRCDRVVLAVGHSARDTFQMLHDRGVYIEAKPFSLGFRIEHPQGLIDRSRFGKFAGHKQLGAAD
YKVVHHCSNGRAVYSFCMCPGGTVVAATSEPGRVVTNGMSQYSRAERNANAGIVVGITPDDYPGGPLAGIAFQRKWEERA
FELGGGDYRAPGQLVGDFIAGRPSTSLGSVEPSYKPGVNPTDLSTALPDYVIEAIREALPEIDKKIAGFAMHDAVLTGVE
TRTSSPIRIRRKDDYQSMNVEGLYPAGEGAGYAGGIYSAAIDGIEVAQAVALSLTSGHAS
>Mature_540_residues
MLRLSEIKLPLDHPESALEAAIRARLAELGVAPDELLRYTVFRRAHDARKRADIKLTYIVDIEVKDEAAALKRIAGKPHC
GVTPDMAYHFVTKAPEHADFLRPVVIGMGPCGLFAGLILAQMGFRPIILERGKAVRERTKDTFGLWRKSVLNPESNVQFG
EGGAGTFSDGKLYSQIKDPNHYGRKVLDEFVKAGAPEDILYLSRPHIGTFRLVSMVEKMRASIHELGGEVRFETRVDDIE
IDQGKVRALKLSNGETLRCDRVVLAVGHSARDTFQMLHDRGVYIEAKPFSLGFRIEHPQGLIDRSRFGKFAGHKQLGAAD
YKVVHHCSNGRAVYSFCMCPGGTVVAATSEPGRVVTNGMSQYSRAERNANAGIVVGITPDDYPGGPLAGIAFQRKWEERA
FELGGGDYRAPGQLVGDFIAGRPSTSLGSVEPSYKPGVNPTDLSTALPDYVIEAIREALPEIDKKIAGFAMHDAVLTGVE
TRTSSPIRIRRKDDYQSMNVEGLYPAGEGAGYAGGIYSAAIDGIEVAQAVALSLTSGHAS

Specific function: Unknown

COG id: COG2509

COG function: function code R; Uncharacterized FAD-dependent dehydrogenases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004792 [H]

Pfam domain/function: PF03486 HI0933_like [H]

EC number: NA

Molecular weight: Translated: 58786; Mature: 58786

Theoretical pI: Translated: 7.92; Mature: 7.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRLSEIKLPLDHPESALEAAIRARLAELGVAPDELLRYTVFRRAHDARKRADIKLTYIV
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEE
DIEVKDEAAALKRIAGKPHCGVTPDMAYHFVTKAPEHADFLRPVVIGMGPCGLFAGLILA
EEEECCHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHH
QMGFRPIILERGKAVRERTKDTFGLWRKSVLNPESNVQFGEGGAGTFSDGKLYSQIKDPN
HHCCCEEEHHCCHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCHHHHHHCCCH
HYGRKVLDEFVKAGAPEDILYLSRPHIGTFRLVSMVEKMRASIHELGGEVRFETRVDDIE
HHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEE
IDQGKVRALKLSNGETLRCDRVVLAVGHSARDTFQMLHDRGVYIEAKPFSLGFRIEHPQG
ECCCCEEEEEECCCCEEEECEEEEEECCCHHHHHHHHHCCCCEEEECCCEEEEEEECCCC
LIDRSRFGKFAGHKQLGAADYKVVHHCSNGRAVYSFCMCPGGTVVAATSEPGRVVTNGMS
HHHHHHHHHHCCCCCCCCCHHHHEEECCCCCEEEEEEECCCCEEEEECCCCCCHHHHHHH
QYSRAERNANAGIVVGITPDDYPGGPLAGIAFQRKWEERAFELGGGDYRAPGQLVGDFIA
HHHHHHCCCCCCEEEEECCCCCCCCCEEHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHC
GRPSTSLGSVEPSYKPGVNPTDLSTALPDYVIEAIREALPEIDKKIAGFAMHDAVLTGVE
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
TRTSSPIRIRRKDDYQSMNVEGLYPAGEGAGYAGGIYSAAIDGIEVAQAVALSLTSGHAS
CCCCCCEEEEECCCCCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MLRLSEIKLPLDHPESALEAAIRARLAELGVAPDELLRYTVFRRAHDARKRADIKLTYIV
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEE
DIEVKDEAAALKRIAGKPHCGVTPDMAYHFVTKAPEHADFLRPVVIGMGPCGLFAGLILA
EEEECCHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHH
QMGFRPIILERGKAVRERTKDTFGLWRKSVLNPESNVQFGEGGAGTFSDGKLYSQIKDPN
HHCCCEEEHHCCHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCHHHHHHCCCH
HYGRKVLDEFVKAGAPEDILYLSRPHIGTFRLVSMVEKMRASIHELGGEVRFETRVDDIE
HHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEE
IDQGKVRALKLSNGETLRCDRVVLAVGHSARDTFQMLHDRGVYIEAKPFSLGFRIEHPQG
ECCCCEEEEEECCCCEEEECEEEEEECCCHHHHHHHHHCCCCEEEECCCEEEEEEECCCC
LIDRSRFGKFAGHKQLGAADYKVVHHCSNGRAVYSFCMCPGGTVVAATSEPGRVVTNGMS
HHHHHHHHHHCCCCCCCCCHHHHEEECCCCCEEEEEEECCCCEEEEECCCCCCHHHHHHH
QYSRAERNANAGIVVGITPDDYPGGPLAGIAFQRKWEERAFELGGGDYRAPGQLVGDFIA
HHHHHHCCCCCCEEEEECCCCCCCCCEEHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHC
GRPSTSLGSVEPSYKPGVNPTDLSTALPDYVIEAIREALPEIDKKIAGFAMHDAVLTGVE
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
TRTSSPIRIRRKDDYQSMNVEGLYPAGEGAGYAGGIYSAAIDGIEVAQAVALSLTSGHAS
CCCCCCEEEEECCCCCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8396545 [H]