| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is cusR [H]
Identifier: 116690087
GI number: 116690087
Start: 2294046
End: 2294720
Strand: Reverse
Name: cusR [H]
Synonym: Bcen2424_2066
Alternate gene names: 116690087
Gene position: 2294720-2294046 (Counterclockwise)
Preceding gene: 116690089
Following gene: 116690086
Centisome position: 65.87
GC content: 66.96
Gene sequence:
>675_bases ATGCGAGTACTGACGGTCGAGGACGATGCGGTGACCGCGAACGAAATCGTCGGCGAACTGACCGCCCGCGGGTTCGAGGT CGACTGGACCGATAACGGCCGCGAAGGGATGATGCGCGCGATGAGCGCATCGTACGACGCGATCACGCTCGACCGGATGC TGCCGGGCGCGGACGGCCTCGCGATCGTGACTGCGATGCGCACGGTCGGCATCGACACGCCGGTGCTGATGCTGAGCGCG CTGGGCGACGTCGACGAGCGCATCCGCGGGCTGCGCGCTGGCGGCGACGATTACCTGACGAAGCCGTTCGATTCCGGCGA ACTGAGCGCGCGCATCGAAGTGCTGCTGCGCCGCCGGCAGGCATCGGGTGTGCCGCAGCAGACGCTGCTGAAGGTCGGCG CGCTCGAGCTCGACCTCATTTCGCGCTGCGCGCGCCGCGGCGCCGACGAGATTCCGCTGCTGCCGACCGAGTTCCGCGTG CTCGAATTCATGATGCGTAACGCAGGCCAGACGATCACGCGCACGATGCTGTTCGAGGCCGTGTGGGGCTATCACTTCGA TCCCGGCACCAACCTGATCGACGTTCACATGGGCCGGCTGCGCAAGAAGATCGATCCGCCCGGCGCGAACCCGATGATCC AGACGGTGCGCGGATCGGGCTACATGCTCGCTTGA
Upstream 100 bases:
>100_bases TGAAGTTATTTTCATCTGGCGCCGCACGGCAATCGCGGCGCTTACGATAGTGGCGGGCGCATCGTGCGCGCCCGTGTTGA AGTTCATTGCGAGGGCAACC
Downstream 100 bases:
>100_bases CGGAGGCGCGAATGGACGCAGCCCGCGCGGCGCACTTCACGCGCCGCTGGCATACGACGACGTTTCGCTGGCTATGCGCA TACGCGGCGATCTTCTCGGT
Product: two component transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 224; Mature: 224
Protein sequence:
>224_residues MRVLTVEDDAVTANEIVGELTARGFEVDWTDNGREGMMRAMSASYDAITLDRMLPGADGLAIVTAMRTVGIDTPVLMLSA LGDVDERIRGLRAGGDDYLTKPFDSGELSARIEVLLRRRQASGVPQQTLLKVGALELDLISRCARRGADEIPLLPTEFRV LEFMMRNAGQTITRTMLFEAVWGYHFDPGTNLIDVHMGRLRKKIDPPGANPMIQTVRGSGYMLA
Sequences:
>Translated_224_residues MRVLTVEDDAVTANEIVGELTARGFEVDWTDNGREGMMRAMSASYDAITLDRMLPGADGLAIVTAMRTVGIDTPVLMLSA LGDVDERIRGLRAGGDDYLTKPFDSGELSARIEVLLRRRQASGVPQQTLLKVGALELDLISRCARRGADEIPLLPTEFRV LEFMMRNAGQTITRTMLFEAVWGYHFDPGTNLIDVHMGRLRKKIDPPGANPMIQTVRGSGYMLA >Mature_224_residues MRVLTVEDDAVTANEIVGELTARGFEVDWTDNGREGMMRAMSASYDAITLDRMLPGADGLAIVTAMRTVGIDTPVLMLSA LGDVDERIRGLRAGGDDYLTKPFDSGELSARIEVLLRRRQASGVPQQTLLKVGALELDLISRCARRGADEIPLLPTEFRV LEFMMRNAGQTITRTMLFEAVWGYHFDPGTNLIDVHMGRLRKKIDPPGANPMIQTVRGSGYMLA
Specific function: Member of the two-component regulatory system CusS/CusR. Activates the expression of cusCFBA in response to increasing levels of copper ions, and probably silver ions [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1786784, Length=223, Percent_Identity=44.3946188340807, Blast_Score=181, Evalue=4e-47, Organism=Escherichia coli, GI87082012, Length=221, Percent_Identity=38.4615384615385, Blast_Score=159, Evalue=2e-40, Organism=Escherichia coli, GI1789402, Length=223, Percent_Identity=39.4618834080717, Blast_Score=153, Evalue=1e-38, Organism=Escherichia coli, GI1786599, Length=225, Percent_Identity=35.1111111111111, Blast_Score=141, Evalue=4e-35, Organism=Escherichia coli, GI1790552, Length=223, Percent_Identity=34.9775784753363, Blast_Score=130, Evalue=5e-32, Organism=Escherichia coli, GI1786911, Length=220, Percent_Identity=35.9090909090909, Blast_Score=129, Evalue=1e-31, Organism=Escherichia coli, GI1789809, Length=229, Percent_Identity=34.9344978165939, Blast_Score=120, Evalue=8e-29, Organism=Escherichia coli, GI1787375, Length=223, Percent_Identity=32.2869955156951, Blast_Score=116, Evalue=9e-28, Organism=Escherichia coli, GI2367329, Length=228, Percent_Identity=32.0175438596491, Blast_Score=103, Evalue=8e-24, Organism=Escherichia coli, GI1790860, Length=225, Percent_Identity=31.5555555555556, Blast_Score=97, Evalue=8e-22, Organism=Escherichia coli, GI1788394, Length=225, Percent_Identity=30.6666666666667, Blast_Score=93, Evalue=1e-20, Organism=Escherichia coli, GI1790863, Length=232, Percent_Identity=30.1724137931034, Blast_Score=93, Evalue=2e-20, Organism=Escherichia coli, GI1787229, Length=231, Percent_Identity=31.1688311688312, Blast_Score=87, Evalue=1e-18, Organism=Escherichia coli, GI145693140, Length=232, Percent_Identity=28.0172413793103, Blast_Score=80, Evalue=1e-16, Organism=Escherichia coli, GI1788550, Length=108, Percent_Identity=30.5555555555556, Blast_Score=67, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR001867 - InterPro: IPR006291 - InterPro: IPR001789 - InterPro: IPR011991 [H]
Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]
EC number: NA
Molecular weight: Translated: 24655; Mature: 24655
Theoretical pI: Translated: 4.96; Mature: 4.96
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 5.8 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 5.8 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVLTVEDDAVTANEIVGELTARGFEVDWTDNGREGMMRAMSASYDAITLDRMLPGADGL CEEEEECCCCCCHHHHHHHHHHCCEEEECCCCCHHHHHHHHHCCCCEEEHHHHCCCCCCH AIVTAMRTVGIDTPVLMLSALGDVDERIRGLRAGGDDYLTKPFDSGELSARIEVLLRRRQ HHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHH ASGVPQQTLLKVGALELDLISRCARRGADEIPLLPTEFRVLEFMMRNAGQTITRTMLFEA HCCCCHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHH VWGYHFDPGTNLIDVHMGRLRKKIDPPGANPMIQTVRGSGYMLA HHCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHEECCCCCCCC >Mature Secondary Structure MRVLTVEDDAVTANEIVGELTARGFEVDWTDNGREGMMRAMSASYDAITLDRMLPGADGL CEEEEECCCCCCHHHHHHHHHHCCEEEECCCCCHHHHHHHHHCCCCEEEHHHHCCCCCCH AIVTAMRTVGIDTPVLMLSALGDVDERIRGLRAGGDDYLTKPFDSGELSARIEVLLRRRQ HHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHH ASGVPQQTLLKVGALELDLISRCARRGADEIPLLPTEFRVLEFMMRNAGQTITRTMLFEA HCCCCHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHH VWGYHFDPGTNLIDVHMGRLRKKIDPPGANPMIQTVRGSGYMLA HHCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]