| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is hyuE [H]
Identifier: 116689985
GI number: 116689985
Start: 2182384
End: 2183175
Strand: Reverse
Name: hyuE [H]
Synonym: Bcen2424_1964
Alternate gene names: 116689985
Gene position: 2183175-2182384 (Counterclockwise)
Preceding gene: 116689986
Following gene: 116689984
Centisome position: 62.66
GC content: 72.1
Gene sequence:
>792_bases ATGAAGATCCGACTGATCAATCCGAATACGACGCAGCGGATGACCGACGCGATGGGCCGCTGCGCGCGCGAGGTCGCGGC CGCCGGCACCGAGATCGTAGCCGTGAGCCCGCCGATGGGGCCGCCGTCGATCGAAGGGTATTACGACGAGGCGCTCGCGA CGCCGGGGCTGCTCGCCGAGATCGCGCAGGGCGAGCGCGACGGCTGCGACGCGTACGTGATCGCGTGCTTCGGCGATCCG GGCCTGTATGCGGCGCGCGAGCTCGCGCGCGGCCCGGTGATCGGCATCGCCGAGGCTGCGATGCATGCGGCGAGCGTGCT CGCGCCGGGCTTCTCGGTCGTCACGACGCTCGCGCGTACCTGCGGGATGGCGTGGCACCTCGCGGAGCGCTACGGGATGA AGCGGTTCTGCCGCAACGTGCGCGCGACCGACGTCGCGGTGCTCGAACTTGACCGGCCCGGCTCGGCCGCGCGCCGGATC ATCGTCGACGAATGCCGGCGCGCGCTCGACGAGGATGGCGCCGATGCGATCGTGCTCGGCTGCGCGGGGATGGCCGAATT CGCGCACGAGATCGAGCAGCAGATCGGCGCGCCGGTGGTCGAGGGCGTCACGGCGGCCGTCAAATGGGCCGAAGCGCTGG TCGCGCTGCGCCTCGCGACCGCGAAGCGCGGCGACTACGCGCGGCCGCTGCCGAAGCGCTACGACGGCGCGTTCGCCCGC TTCAGCCCGCCGGACGGGGCGGCGGCGGAACCTCCGCCGAATTTGCCGCAACCGCACATACACACCGTCTGA
Upstream 100 bases:
>100_bases GGCTGGCAGGCCCTCGCGAATTTCTCGTGGTTCATCGGCGCGGGGCTCGGCTTCGTGTTCTACCGGCTGCTCGCGAGCGC GAAGGCGTAAGGAGCATGCG
Downstream 100 bases:
>100_bases CACGCACTATCTGCGCCGCTGTATGGGCGCGTATGAACGTTTTCGCTACACTGGGCCGTCATCGCATCGGCTGGTGCGGC CGCCTCCGGCACCGCGCAGT
Product: Asp/Glu racemase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 263; Mature: 263
Protein sequence:
>263_residues MKIRLINPNTTQRMTDAMGRCAREVAAAGTEIVAVSPPMGPPSIEGYYDEALATPGLLAEIAQGERDGCDAYVIACFGDP GLYAARELARGPVIGIAEAAMHAASVLAPGFSVVTTLARTCGMAWHLAERYGMKRFCRNVRATDVAVLELDRPGSAARRI IVDECRRALDEDGADAIVLGCAGMAEFAHEIEQQIGAPVVEGVTAAVKWAEALVALRLATAKRGDYARPLPKRYDGAFAR FSPPDGAAAEPPPNLPQPHIHTV
Sequences:
>Translated_263_residues MKIRLINPNTTQRMTDAMGRCAREVAAAGTEIVAVSPPMGPPSIEGYYDEALATPGLLAEIAQGERDGCDAYVIACFGDP GLYAARELARGPVIGIAEAAMHAASVLAPGFSVVTTLARTCGMAWHLAERYGMKRFCRNVRATDVAVLELDRPGSAARRI IVDECRRALDEDGADAIVLGCAGMAEFAHEIEQQIGAPVVEGVTAAVKWAEALVALRLATAKRGDYARPLPKRYDGAFAR FSPPDGAAAEPPPNLPQPHIHTV >Mature_263_residues MKIRLINPNTTQRMTDAMGRCAREVAAAGTEIVAVSPPMGPPSIEGYYDEALATPGLLAEIAQGERDGCDAYVIACFGDP GLYAARELARGPVIGIAEAAMHAASVLAPGFSVVTTLARTCGMAWHLAERYGMKRFCRNVRATDVAVLELDRPGSAARRI IVDECRRALDEDGADAIVLGCAGMAEFAHEIEQQIGAPVVEGVTAAVKWAEALVALRLATAKRGDYARPLPKRYDGAFAR FSPPDGAAAEPPPNLPQPHIHTV
Specific function: Responsible for racemization of the D-5-substituted hydantoins to their corresponding L-amino acids [H]
COG id: COG4126
COG function: function code E; Hydantoin racemase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To yeast DCG1 and S.pombe SPAC1F7.10 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015942 [H]
Pfam domain/function: PF01177 Asp_Glu_race [H]
EC number: =5.1.99.5 [H]
Molecular weight: Translated: 27889; Mature: 27889
Theoretical pI: Translated: 5.69; Mature: 5.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIRLINPNTTQRMTDAMGRCAREVAAAGTEIVAVSPPMGPPSIEGYYDEALATPGLLAE CEEEEECCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHCCCHHHHH IAQGERDGCDAYVIACFGDPGLYAARELARGPVIGIAEAAMHAASVLAPGFSVVTTLART HHCCCCCCCCEEEEEEECCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHH CGMAWHLAERYGMKRFCRNVRATDVAVLELDRPGSAARRIIVDECRRALDEDGADAIVLG HHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCEEEEE CAGMAEFAHEIEQQIGAPVVEGVTAAVKWAEALVALRLATAKRGDYARPLPKRYDGAFAR HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCC FSPPDGAAAEPPPNLPQPHIHTV CCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKIRLINPNTTQRMTDAMGRCAREVAAAGTEIVAVSPPMGPPSIEGYYDEALATPGLLAE CEEEEECCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHCCCHHHHH IAQGERDGCDAYVIACFGDPGLYAARELARGPVIGIAEAAMHAASVLAPGFSVVTTLART HHCCCCCCCCEEEEEEECCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHH CGMAWHLAERYGMKRFCRNVRATDVAVLELDRPGSAARRIIVDECRRALDEDGADAIVLG HHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCEEEEE CAGMAEFAHEIEQQIGAPVVEGVTAAVKWAEALVALRLATAKRGDYARPLPKRYDGAFAR HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCC FSPPDGAAAEPPPNLPQPHIHTV CCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1339422 [H]