| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116689890
Identifier: 116689890
GI number: 116689890
Start: 2076221
End: 2076847
Strand: Reverse
Name: 116689890
Synonym: Bcen2424_1869
Alternate gene names: NA
Gene position: 2076847-2076221 (Counterclockwise)
Preceding gene: 116689891
Following gene: 116689889
Centisome position: 59.61
GC content: 59.49
Gene sequence:
>627_bases ATGTTCGGTCGATTCATGCCCACCGAGGGCAAGTTCTTTGAACTCTTCAACGCGCACGCGAAGCACATCGTTTCCGGTGG CCGCGAGCTCGAACTGCTGATCGACAATCTCGCCGACGCCGAGATTCACAAGCAAAACGTGCAAATCGCCGAGAAGGCCG CCGACAAGCTCACGCACGAGGCGATCGATCTGCTGCACAAGACTTTCATCACGCCGCTCGATCGCGACGAGATCCACAAG CTGATCACGACGATGGACGACATCCTCGACCTGATGGAAGACGTCGCGACGGCCGTGTCGCTGTACGACGTGCAGTCCGT CACGTCCGAGGCGAGCCAGCTCGCGCACATCGTCACCCAGTCGGCGCAACACGTGCAGCAAGCCGTCGGCTTGCTGTCCG ACATGAAACAGTCGGCGCAGATCCTCAAGCAATGCGAGGAAATCGACCGCTGGGAATCGGAAGCCGACCGCGTGCTGCGC GCGGCGATGTCGAAGCTGTTCCGCGAAGAAGACGACGTGAAGACGCTCATCAAGCTGAAGGCGATCTACGAGCTGCTCGA AGAGATCACCGACAAGTGCGAGGACGTCGCGAACATCATCGAAGGCATCGTGCTGGAAAACGCCTGA
Upstream 100 bases:
>100_bases CAATCCCGGCGTGCGCATATGCGCACGTCGCGTCGCGACCGAAACCGGTACAATGTCGCCCGTTTTCGTGACAGTAGTTT GACAATCTCTCAGGAATCCC
Downstream 100 bases:
>100_bases GCGGACCACGATGCATTCGATACAACTCGCCCTATGGATGGTCGCGGCACTGGTGCTCGTCGCGCTCGTATTCGACTTCA TGAACGGCTTTCACGACGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 208; Mature: 208
Protein sequence:
>208_residues MFGRFMPTEGKFFELFNAHAKHIVSGGRELELLIDNLADAEIHKQNVQIAEKAADKLTHEAIDLLHKTFITPLDRDEIHK LITTMDDILDLMEDVATAVSLYDVQSVTSEASQLAHIVTQSAQHVQQAVGLLSDMKQSAQILKQCEEIDRWESEADRVLR AAMSKLFREEDDVKTLIKLKAIYELLEEITDKCEDVANIIEGIVLENA
Sequences:
>Translated_208_residues MFGRFMPTEGKFFELFNAHAKHIVSGGRELELLIDNLADAEIHKQNVQIAEKAADKLTHEAIDLLHKTFITPLDRDEIHK LITTMDDILDLMEDVATAVSLYDVQSVTSEASQLAHIVTQSAQHVQQAVGLLSDMKQSAQILKQCEEIDRWESEADRVLR AAMSKLFREEDDVKTLIKLKAIYELLEEITDKCEDVANIIEGIVLENA >Mature_208_residues MFGRFMPTEGKFFELFNAHAKHIVSGGRELELLIDNLADAEIHKQNVQIAEKAADKLTHEAIDLLHKTFITPLDRDEIHK LITTMDDILDLMEDVATAVSLYDVQSVTSEASQLAHIVTQSAQHVQQAVGLLSDMKQSAQILKQCEEIDRWESEADRVLR AAMSKLFREEDDVKTLIKLKAIYELLEEITDKCEDVANIIEGIVLENA
Specific function: Could be involved in orthophosphate transport [H]
COG id: COG1392
COG function: function code P; Phosphate transport regulator (distant homolog of PhoU)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0111 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018445 [H]
Pfam domain/function: PF01865 PhoU_div [H]
EC number: NA
Molecular weight: Translated: 23485; Mature: 23485
Theoretical pI: Translated: 4.44; Mature: 4.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFGRFMPTEGKFFELFNAHAKHIVSGGRELELLIDNLADAEIHKQNVQIAEKAADKLTHE CCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AIDLLHKTFITPLDRDEIHKLITTMDDILDLMEDVATAVSLYDVQSVTSEASQLAHIVTQ HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SAQHVQQAVGLLSDMKQSAQILKQCEEIDRWESEADRVLRAAMSKLFREEDDVKTLIKLK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH AIYELLEEITDKCEDVANIIEGIVLENA HHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MFGRFMPTEGKFFELFNAHAKHIVSGGRELELLIDNLADAEIHKQNVQIAEKAADKLTHE CCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AIDLLHKTFITPLDRDEIHKLITTMDDILDLMEDVATAVSLYDVQSVTSEASQLAHIVTQ HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SAQHVQQAVGLLSDMKQSAQILKQCEEIDRWESEADRVLRAAMSKLFREEDDVKTLIKLK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH AIYELLEEITDKCEDVANIIEGIVLENA HHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9696772; 11481430 [H]