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The map label for this gene is pcaC [H]

Identifier: 116689864

GI number: 116689864

Start: 2048550

End: 2048984

Strand: Reverse

Name: pcaC [H]

Synonym: Bcen2424_1843

Alternate gene names: 116689864

Gene position: 2048984-2048550 (Counterclockwise)

Preceding gene: 116689865

Following gene: 116689862

Centisome position: 58.81

GC content: 68.05

Gene sequence:

>435_bases
ATGGAACGACTCGTTGAGGATCGCTACACGCGCGGCTGGAACAAGCTCAAGGAAATCGACGGCGAAGCGGGCGAACGCGT
GATCGCGGCGCTCGCGCCGATCGCGCCGGACTTCGGGCGGCTCCTGGTCGAATTCAGCTTCGGCGACATCTACAGCCGGC
CGCAGCTCGACCTGAAGGCGCGCGAAATCGCGACGATCGCCGCGCTGGCCGCGCTCGGCAACGCGCAGCCGCAACTGAAG
GTGCATATCGAGGCCGCGCTGAACGTCGGCTGCACGCGCGACGAGATCGTCGAGGTGTTCATGCAGATGGCCGTGTATGC
GGGGATGCCCGCCGCGCTCAACGCGTTGTTCGCCGCGCACGAGGTGTTCACGCGGCGCGACGAAGCGGCCGGCGTGACGG
ACCACCCGAACGAAGCGGCCGGGCAGCCCGCATGA

Upstream 100 bases:

>100_bases
GACGCGATCGGCGACAAGATCGCGTACTACGAGGCGCGGGAACGGGAAACGGAACGACGGGCGAAACCTTCTCACTCTTT
ATCGGAACAGGACGGACACG

Downstream 100 bases:

>100_bases
CCAGGCATGCGCCCGTGCGTCACGCGCGGTGCGGCGCGACGATCCGGTACTTCGCGATGCGCCGGTACAGCGTCGCGCGC
GACATGCCGAGCGCCCGGGC

Product: carboxymuconolactone decarboxylase

Products: NA

Alternate protein names: CMD [H]

Number of amino acids: Translated: 144; Mature: 144

Protein sequence:

>144_residues
MERLVEDRYTRGWNKLKEIDGEAGERVIAALAPIAPDFGRLLVEFSFGDIYSRPQLDLKAREIATIAALAALGNAQPQLK
VHIEAALNVGCTRDEIVEVFMQMAVYAGMPAALNALFAAHEVFTRRDEAAGVTDHPNEAAGQPA

Sequences:

>Translated_144_residues
MERLVEDRYTRGWNKLKEIDGEAGERVIAALAPIAPDFGRLLVEFSFGDIYSRPQLDLKAREIATIAALAALGNAQPQLK
VHIEAALNVGCTRDEIVEVFMQMAVYAGMPAALNALFAAHEVFTRRDEAAGVTDHPNEAAGQPA
>Mature_144_residues
MERLVEDRYTRGWNKLKEIDGEAGERVIAALAPIAPDFGRLLVEFSFGDIYSRPQLDLKAREIATIAALAALGNAQPQLK
VHIEAALNVGCTRDEIVEVFMQMAVYAGMPAALNALFAAHEVFTRRDEAAGVTDHPNEAAGQPA

Specific function: Unknown

COG id: COG0599

COG function: function code S; Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003779
- InterPro:   IPR012788 [H]

Pfam domain/function: PF02627 CMD [H]

EC number: =4.1.1.44 [H]

Molecular weight: Translated: 15647; Mature: 15647

Theoretical pI: Translated: 4.66; Mature: 4.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERLVEDRYTRGWNKLKEIDGEAGERVIAALAPIAPDFGRLLVEFSFGDIYSRPQLDLKA
CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCHHH
REIATIAALAALGNAQPQLKVHIEAALNVGCTRDEIVEVFMQMAVYAGMPAALNALFAAH
HHHHHHHHHHHHCCCCCCEEEEEEEHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHH
EVFTRRDEAAGVTDHPNEAAGQPA
HHHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MERLVEDRYTRGWNKLKEIDGEAGERVIAALAPIAPDFGRLLVEFSFGDIYSRPQLDLKA
CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCHHH
REIATIAALAALGNAQPQLKVHIEAALNVGCTRDEIVEVFMQMAVYAGMPAALNALFAAH
HHHHHHHHHHHHCCCCCCEEEEEEEHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHH
EVFTRRDEAAGVTDHPNEAAGQPA
HHHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2298704 [H]