Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

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The map label for this gene is yhjS [H]

Identifier: 116689404

GI number: 116689404

Start: 1525543

End: 1527435

Strand: Direct

Name: yhjS [H]

Synonym: Bcen2424_1382

Alternate gene names: 116689404

Gene position: 1525543-1527435 (Clockwise)

Preceding gene: 116689403

Following gene: 116689405

Centisome position: 43.79

GC content: 74.54

Gene sequence:

>1893_bases
ATGTGGCCGGCGGGCGGCCGTGCCGGCGCCTTGAGCCGGCTCGCGATCGACGGCCTGCCCGACACCTGGACGCAACTGGA
AGCCGGCGGCCTTTACGCGATCTACGCGGCCGGCGGCACGCCGGCCTGCGATGCGCTCGTCTGGGAAAGCGCGCGTCAGG
CGCGCACGCGCGACGTCACGATCGTGCTGGCGCGCGATCCGGCGCGCGTCGCCACGCAGATGGCATCGCTCGGCTTCGCG
GGCGGCGTGCAGCCGGCCGGCTGGCCGCGCAACCTGAACGTGCTGGCGATGCCGGCTGCGGTCGAGCCGGCCGACGACGG
TGCCGACGCCGGCGCAGCCGGCAACGCACCGCGCCGCGCGGCGCCGGGCCCGTTCGCGCGGCTGACCGGCGGCTTGCGCG
CGATGAAGCGCTATGGATTTCACGCGCGTTCGCTGTATTTCGTCGAAGGCGCCCAGCGCTGGTTCAGCTGGGACGATCCG
GTCGCGCTCGCGGACGAAGCGCACGCGCTGGCCGACTGGTGCCGCACGCGCCGGATTGCGCTCGTGCTGCTGCTCGACCC
TGAAGCGACCCGCGCGGGCGGCGACGCGCGCGCCGACGATGCGCCGCTCGTGCGCGATGCCGATCGCACGCCGCGCAGCG
GCTTCCACGGGATCTGTTCGGGCGTCGCGCAGTTGCAGCGCACGCATGGCGAGTTGTTGTGGGTGGTCGATTTCTGGCGC
GCGGGCGACACGCTCGCGGCCGGCGAGGTGCGGCCGCTGCGCTTCGCACCGGGCGGCCGGCTGTCGGCGAGCGTCGATGG
CGGCGCGACCGAACCGGCACGGCGGATGAAGCTCGCGAGCGACGAGGATCGCGTGGTGGTCAGCCGCGCGGTGCTCGACG
GTGCGAGCCGCGTGCCGGACGGCTGGGAGATCGTCGACGACAACGCGGCCGTCGTCGCCGCGTGCGCGAGCGCGCAGGCC
GCGACCGCGGTGCTCGTGTTCCGCTCGCACGCGCAGCTCGAAGCGCTGTGCGCGGACGTGCACGCGCTGCGCCGGCAGTG
CGGCGGCGCGCTGAAGATCGCGGTCGTCGAGCGCGGCGAGGTGCTGCGCCAGCAGTTCGAGATGCTCGTGCTGAGCGTCG
GCGCGAACCGGGTCGTCGCGCGCGACCTGCCCGTCTCGCGGATGCAGGCCGCCGTGCACGCGCTGCACGGCCAGCTCTAC
GCGCGGCCCGTCGCGGCCGACTACCGCGCGGCGCTCGCGGCCGCGCTCGGCGATTCGGTGCTCGGTTATCTGCCGGTCGG
CGCGTTTTGCCAGCGGATTCGCGCGGTGCTCGATCGCGGCGCGGTGCTCGCGCTGCCGCACACGCTCGCGAAGCTCACGC
TGTTGCCGGGCGTGTCGCACGTCGACGCGCTGCGGCACTGCCGGCCGCGCCGCGCGGGCGACGTCGTGACGGCCGATGCC
GGGCACCTGTTCGTGTTCCTGTTCGCCTGCGAGCCGGCCGATGCCGAGGACGCGCTCGCGCGGATTTTCGAGGTGCCGGT
CGATACGCTGTCCGACCGCGTCGTGTGCCTCGGGCAGGGCAGCATCGACACCGAGCTCGACGCGCTGAAGGCCGAGAACC
GCCGCGCGCCGATCGCCGACTACAGCGACCTGTTCGCGGCGACGCGGCCGGCGGGCGCCGCACGCGCAGCAGCCGCGCCC
GTCGAACCCGGCGCGGCATTGCCCGATGCAGGCGAGGTGAGCGACGCGATCGACGCGATCGATACCGTCGTCGCGCTCGA
CGCGATCGGTATGCCGCAGGCGTTGGCGCCCATCGCCGTCGACGCGTCGCCGCCGGACCCCGTCATTTCCGCCGCGCGTG
CGCGCGGCGCCGTCCGCAGCGCGATGCCGTTGCGCAAGCAGGAGGACGCATGA

Upstream 100 bases:

>100_bases
TTCGGATTACTAGGGGAACGCCGTGACTACGGAATTCGATGCCACCCGCTCCGCGCCCGGTGCCATTGGCCTGGCCGATC
GCCTGCGCGCGCTGCTGCGC

Downstream 100 bases:

>100_bases
TCGCGGAACTCGTCATCGGCTTCGTCGTCGGTATCGTGATTGCGGTACCGGTGTGGATCGTCGCGCAGCACCTCGGCATT
GGCCGCGGCTTCCATGCGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 630; Mature: 630

Protein sequence:

>630_residues
MWPAGGRAGALSRLAIDGLPDTWTQLEAGGLYAIYAAGGTPACDALVWESARQARTRDVTIVLARDPARVATQMASLGFA
GGVQPAGWPRNLNVLAMPAAVEPADDGADAGAAGNAPRRAAPGPFARLTGGLRAMKRYGFHARSLYFVEGAQRWFSWDDP
VALADEAHALADWCRTRRIALVLLLDPEATRAGGDARADDAPLVRDADRTPRSGFHGICSGVAQLQRTHGELLWVVDFWR
AGDTLAAGEVRPLRFAPGGRLSASVDGGATEPARRMKLASDEDRVVVSRAVLDGASRVPDGWEIVDDNAAVVAACASAQA
ATAVLVFRSHAQLEALCADVHALRRQCGGALKIAVVERGEVLRQQFEMLVLSVGANRVVARDLPVSRMQAAVHALHGQLY
ARPVAADYRAALAAALGDSVLGYLPVGAFCQRIRAVLDRGAVLALPHTLAKLTLLPGVSHVDALRHCRPRRAGDVVTADA
GHLFVFLFACEPADAEDALARIFEVPVDTLSDRVVCLGQGSIDTELDALKAENRRAPIADYSDLFAATRPAGAARAAAAP
VEPGAALPDAGEVSDAIDAIDTVVALDAIGMPQALAPIAVDASPPDPVISAARARGAVRSAMPLRKQEDA

Sequences:

>Translated_630_residues
MWPAGGRAGALSRLAIDGLPDTWTQLEAGGLYAIYAAGGTPACDALVWESARQARTRDVTIVLARDPARVATQMASLGFA
GGVQPAGWPRNLNVLAMPAAVEPADDGADAGAAGNAPRRAAPGPFARLTGGLRAMKRYGFHARSLYFVEGAQRWFSWDDP
VALADEAHALADWCRTRRIALVLLLDPEATRAGGDARADDAPLVRDADRTPRSGFHGICSGVAQLQRTHGELLWVVDFWR
AGDTLAAGEVRPLRFAPGGRLSASVDGGATEPARRMKLASDEDRVVVSRAVLDGASRVPDGWEIVDDNAAVVAACASAQA
ATAVLVFRSHAQLEALCADVHALRRQCGGALKIAVVERGEVLRQQFEMLVLSVGANRVVARDLPVSRMQAAVHALHGQLY
ARPVAADYRAALAAALGDSVLGYLPVGAFCQRIRAVLDRGAVLALPHTLAKLTLLPGVSHVDALRHCRPRRAGDVVTADA
GHLFVFLFACEPADAEDALARIFEVPVDTLSDRVVCLGQGSIDTELDALKAENRRAPIADYSDLFAATRPAGAARAAAAP
VEPGAALPDAGEVSDAIDAIDTVVALDAIGMPQALAPIAVDASPPDPVISAARARGAVRSAMPLRKQEDA
>Mature_630_residues
MWPAGGRAGALSRLAIDGLPDTWTQLEAGGLYAIYAAGGTPACDALVWESARQARTRDVTIVLARDPARVATQMASLGFA
GGVQPAGWPRNLNVLAMPAAVEPADDGADAGAAGNAPRRAAPGPFARLTGGLRAMKRYGFHARSLYFVEGAQRWFSWDDP
VALADEAHALADWCRTRRIALVLLLDPEATRAGGDARADDAPLVRDADRTPRSGFHGICSGVAQLQRTHGELLWVVDFWR
AGDTLAAGEVRPLRFAPGGRLSASVDGGATEPARRMKLASDEDRVVVSRAVLDGASRVPDGWEIVDDNAAVVAACASAQA
ATAVLVFRSHAQLEALCADVHALRRQCGGALKIAVVERGEVLRQQFEMLVLSVGANRVVARDLPVSRMQAAVHALHGQLY
ARPVAADYRAALAAALGDSVLGYLPVGAFCQRIRAVLDRGAVLALPHTLAKLTLLPGVSHVDALRHCRPRRAGDVVTADA
GHLFVFLFACEPADAEDALARIFEVPVDTLSDRVVCLGQGSIDTELDALKAENRRAPIADYSDLFAATRPAGAARAAAAP
VEPGAALPDAGEVSDAIDAIDTVVALDAIGMPQALAPIAVDASPPDPVISAARARGAVRSAMPLRKQEDA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789958, Length=255, Percent_Identity=33.3333333333333, Blast_Score=142, Evalue=5e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017745 [H]

Pfam domain/function: PF10995 DUF2819 [H]

EC number: NA

Molecular weight: Translated: 66072; Mature: 66072

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWPAGGRAGALSRLAIDGLPDTWTQLEAGGLYAIYAAGGTPACDALVWESARQARTRDVT
CCCCCCCCCCHHHHEECCCCCHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCEE
IVLARDPARVATQMASLGFAGGVQPAGWPRNLNVLAMPAAVEPADDGADAGAAGNAPRRA
EEEECCHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCC
APGPFARLTGGLRAMKRYGFHARSLYFVEGAQRWFSWDDPVALADEAHALADWCRTRRIA
CCCCHHHHHHHHHHHHHCCCCCEEEEEEECHHHHCCCCCCEEHHHHHHHHHHHHHCCEEE
LVLLLDPEATRAGGDARADDAPLVRDADRTPRSGFHGICSGVAQLQRTHGELLWVVDFWR
EEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEEEC
AGDTLAAGEVRPLRFAPGGRLSASVDGGATEPARRMKLASDEDRVVVSRAVLDGASRVPD
CCCEEECCCCCEEEECCCCCEEEECCCCCCCHHHHHCCCCCCCCEEHHHHHHCCCCCCCC
GWEIVDDNAAVVAACASAQAATAVLVFRSHAQLEALCADVHALRRQCGGALKIAVVERGE
CCEEECCCCEEEEEHHHHHHHEEEEEHHCCHHHHHHHHHHHHHHHHCCCEEEEEEECHHH
VLRQQFEMLVLSVGANRVVARDLPVSRMQAAVHALHGQLYARPVAADYRAALAAALGDSV
HHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
LGYLPVGAFCQRIRAVLDRGAVLALPHTLAKLTLLPGVSHVDALRHCRPRRAGDVVTADA
HHHCCHHHHHHHHHHHHCCCCEEECHHHHHHHHHCCCCHHHHHHHHCCCCCCCCEEEECC
GHLFVFLFACEPADAEDALARIFEVPVDTLSDRVVCLGQGSIDTELDALKAENRRAPIAD
CCEEEEEEECCCCCHHHHHHHHHHCCHHHCCCCEEEEECCCCCCHHHHHHHCCCCCCCCC
YSDLFAATRPAGAARAAAAPVEPGAALPDAGEVSDAIDAIDTVVALDAIGMPQALAPIAV
HHHHHHHCCCCCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHCCEEE
DASPPDPVISAARARGAVRSAMPLRKQEDA
CCCCCCHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MWPAGGRAGALSRLAIDGLPDTWTQLEAGGLYAIYAAGGTPACDALVWESARQARTRDVT
CCCCCCCCCCHHHHEECCCCCHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCEE
IVLARDPARVATQMASLGFAGGVQPAGWPRNLNVLAMPAAVEPADDGADAGAAGNAPRRA
EEEECCHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCC
APGPFARLTGGLRAMKRYGFHARSLYFVEGAQRWFSWDDPVALADEAHALADWCRTRRIA
CCCCHHHHHHHHHHHHHCCCCCEEEEEEECHHHHCCCCCCEEHHHHHHHHHHHHHCCEEE
LVLLLDPEATRAGGDARADDAPLVRDADRTPRSGFHGICSGVAQLQRTHGELLWVVDFWR
EEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEEEC
AGDTLAAGEVRPLRFAPGGRLSASVDGGATEPARRMKLASDEDRVVVSRAVLDGASRVPD
CCCEEECCCCCEEEECCCCCEEEECCCCCCCHHHHHCCCCCCCCEEHHHHHHCCCCCCCC
GWEIVDDNAAVVAACASAQAATAVLVFRSHAQLEALCADVHALRRQCGGALKIAVVERGE
CCEEECCCCEEEEEHHHHHHHEEEEEHHCCHHHHHHHHHHHHHHHHCCCEEEEEEECHHH
VLRQQFEMLVLSVGANRVVARDLPVSRMQAAVHALHGQLYARPVAADYRAALAAALGDSV
HHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
LGYLPVGAFCQRIRAVLDRGAVLALPHTLAKLTLLPGVSHVDALRHCRPRRAGDVVTADA
HHHCCHHHHHHHHHHHHCCCCEEECHHHHHHHHHCCCCHHHHHHHHCCCCCCCCEEEECC
GHLFVFLFACEPADAEDALARIFEVPVDTLSDRVVCLGQGSIDTELDALKAENRRAPIAD
CCEEEEEEECCCCCHHHHHHHHHHCCHHHCCCCEEEEECCCCCCHHHHHHHCCCCCCCCC
YSDLFAATRPAGAARAAAAPVEPGAALPDAGEVSDAIDAIDTVVALDAIGMPQALAPIAV
HHHHHHHCCCCCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHCCEEE
DASPPDPVISAARARGAVRSAMPLRKQEDA
CCCCCCHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]