| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is bcsZ [H]
Identifier: 116689402
GI number: 116689402
Start: 1520348
End: 1521577
Strand: Direct
Name: bcsZ [H]
Synonym: Bcen2424_1380
Alternate gene names: 116689402
Gene position: 1520348-1521577 (Clockwise)
Preceding gene: 116689401
Following gene: 116689403
Centisome position: 43.64
GC content: 73.58
Gene sequence:
>1230_bases ATGGCGCGGGCAATGACGAAGCGACGGGCAACGCAGCCGGCGCGGCGTGTCGGCGCGACGCTCGCGCTGGCGGTCGCGGT GACGTGCGCGGCGGCCGGCATGGCCACGCGCGCGCACGCGGCGGCGGCCGGTGCAGCCGATGCGGCGAGCACGGGATGCA GCGCGGCGTGGCCGCGCTGGGACGCGTTCAAGCGTGATTTCATCTCGGCCGACGGCCGGGTGATCGACGTCGGCTCGGCC GATTCGCGCACGGTATCGGAGGGGCAGGCGTATGGACTTTTCTTCGCGCTGGTCGCGAACGACCGGCGCATGTTCGACAC GATCCTCGCATGGACCGAGAACAACCTCGCGCAGGGCGACCTGAGCGCGCACCTGCCGGCGTGGCTGTGGGGCCGTGCGC CCGACGGCGCGTGGCGCGTGCTCGACGCGAACCCGGCGTCGGACGCCGACCTGTGGATCGCGTATGCGCTCGTCGAGGCC GGGCGGCTGTGGCACGAGCGCAGCTATACGGCGCGCGGCGCGCTGCTCGCGAAGCGCGTGCTCGACGCCGAGACGGCGAC CGTGCCGGGCCTCGGCCTCACGCTGCTGCCGGGCCCGACCGGGTTCAAGCTGGCCAACGGCCAATGGCGCGTGAATCCGA GCTATTCGCCGCCGCAGGTGATTCGCGCGCTCGGCGCACGACTGCCCGACGACCGTCGCTGGGCCGCGCTGGCGTCCAGC ACCGCTCGCGTGCTGCTCGACACCGCGCCGAAGGGCTTTTCGCCCGACTGGGCGCTGTATCGCGCGGGCAACGGTTTCGG GCCCGATCCGCAGACCCATGCGGAAAGCGCGTACAACGCGATCCGCGTGTACCTGTGGGCCGGCATGCTGGACCGCGCCG ATCCGCTTGCCGCGCCGCTGCTCGCGAAGTTCGCGCCGTTCGCCGACCATATCGCCGCGCACGGCGCGCCGCCGGAGAAG GTCGATACGACGACGGGCGTCGCGGGGCCGAACGACGGCAACGGCGGCTTCTCCGCGGCCGCCGTGCCGTTCCTCGACGC ACGCGGCCAGCACGCGCTCGCGGATGCCCAGGCGGCCCGCGTCGATACGCTCGCGCGCCAGTCGGCGCCCGGCTATTACA CGAGCGTGCTGACGCTGTTCGGCCTCGGCTGGCGCGATGGCCGCTACCGGTTCGGGGCGGACGGCACGCTCGACACCCGC TGGGGAGGCCGTTCGTGCGCCGCCCGCTGA
Upstream 100 bases:
>100_bases GCTGCTCGGCGCGGTCGGCGTCGTCGCAGGGCTGCTGCTCGCGCTCGGCGTGTTCAGCGTGCTGCAGCGAATCGCCGCGC GTCGCCGGGGGATGTAACGG
Downstream 100 bases:
>100_bases AGTGTGCCGCGCCGCACGTCGCGGGATTCGCGTGGCTCGCGTCGTCGGTGTGCGCGGCGGCGCCGGGCGCCGCCTCCGGC GCGGCGATCGCGAACCCGGC
Product: endo-1,4-D-glucanase
Products: NA
Alternate protein names: Carboxymethylcellulase; CMCase; Cellulase; Endo-1,4-beta-glucanase [H]
Number of amino acids: Translated: 409; Mature: 408
Protein sequence:
>409_residues MARAMTKRRATQPARRVGATLALAVAVTCAAAGMATRAHAAAAGAADAASTGCSAAWPRWDAFKRDFISADGRVIDVGSA DSRTVSEGQAYGLFFALVANDRRMFDTILAWTENNLAQGDLSAHLPAWLWGRAPDGAWRVLDANPASDADLWIAYALVEA GRLWHERSYTARGALLAKRVLDAETATVPGLGLTLLPGPTGFKLANGQWRVNPSYSPPQVIRALGARLPDDRRWAALASS TARVLLDTAPKGFSPDWALYRAGNGFGPDPQTHAESAYNAIRVYLWAGMLDRADPLAAPLLAKFAPFADHIAAHGAPPEK VDTTTGVAGPNDGNGGFSAAAVPFLDARGQHALADAQAARVDTLARQSAPGYYTSVLTLFGLGWRDGRYRFGADGTLDTR WGGRSCAAR
Sequences:
>Translated_409_residues MARAMTKRRATQPARRVGATLALAVAVTCAAAGMATRAHAAAAGAADAASTGCSAAWPRWDAFKRDFISADGRVIDVGSA DSRTVSEGQAYGLFFALVANDRRMFDTILAWTENNLAQGDLSAHLPAWLWGRAPDGAWRVLDANPASDADLWIAYALVEA GRLWHERSYTARGALLAKRVLDAETATVPGLGLTLLPGPTGFKLANGQWRVNPSYSPPQVIRALGARLPDDRRWAALASS TARVLLDTAPKGFSPDWALYRAGNGFGPDPQTHAESAYNAIRVYLWAGMLDRADPLAAPLLAKFAPFADHIAAHGAPPEK VDTTTGVAGPNDGNGGFSAAAVPFLDARGQHALADAQAARVDTLARQSAPGYYTSVLTLFGLGWRDGRYRFGADGTLDTR WGGRSCAAR >Mature_408_residues ARAMTKRRATQPARRVGATLALAVAVTCAAAGMATRAHAAAAGAADAASTGCSAAWPRWDAFKRDFISADGRVIDVGSAD SRTVSEGQAYGLFFALVANDRRMFDTILAWTENNLAQGDLSAHLPAWLWGRAPDGAWRVLDANPASDADLWIAYALVEAG RLWHERSYTARGALLAKRVLDAETATVPGLGLTLLPGPTGFKLANGQWRVNPSYSPPQVIRALGARLPDDRRWAALASST ARVLLDTAPKGFSPDWALYRAGNGFGPDPQTHAESAYNAIRVYLWAGMLDRADPLAAPLLAKFAPFADHIAAHGAPPEKV DTTTGVAGPNDGNGGFSAAAVPFLDARGQHALADAQAARVDTLARQSAPGYYTSVLTLFGLGWRDGRYRFGADGTLDTRW GGRSCAAR
Specific function: Hydrolyzes carboxymethylcellulose [H]
COG id: COG3405
COG function: function code G; Endoglucanase Y
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 8 (cellulase D) family [H]
Homologues:
Organism=Escherichia coli, GI1789951, Length=366, Percent_Identity=49.1803278688525, Blast_Score=328, Evalue=3e-91,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008928 - InterPro: IPR012341 - InterPro: IPR002037 - InterPro: IPR019834 [H]
Pfam domain/function: PF01270 Glyco_hydro_8 [H]
EC number: =3.2.1.4 [H]
Molecular weight: Translated: 43310; Mature: 43179
Theoretical pI: Translated: 9.50; Mature: 9.50
Prosite motif: PS00812 GLYCOSYL_HYDROL_F8
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARAMTKRRATQPARRVGATLALAVAVTCAAAGMATRAHAAAAGAADAASTGCSAAWPRW CCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCH DAFKRDFISADGRVIDVGSADSRTVSEGQAYGLFFALVANDRRMFDTILAWTENNLAQGD HHHHHHHHCCCCCEEECCCCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHCCCCCCCCC LSAHLPAWLWGRAPDGAWRVLDANPASDADLWIAYALVEAGRLWHERSYTARGALLAKRV HHHCCCHHEECCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH LDAETATVPGLGLTLLPGPTGFKLANGQWRVNPSYSPPQVIRALGARLPDDRRWAALASS HCCHHCCCCCCCEEECCCCCCCEECCCEEEECCCCCCHHHHHHHHCCCCCCHHHHHHHHC TARVLLDTAPKGFSPDWALYRAGNGFGPDPQTHAESAYNAIRVYLWAGMLDRADPLAAPL CCEEEEECCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH LAKFAPFADHIAAHGAPPEKVDTTTGVAGPNDGNGGFSAAAVPFLDARGQHALADAQAAR HHHHCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCHHCCCCCHHHHHHHHHH VDTLARQSAPGYYTSVLTLFGLGWRDGRYRFGADGTLDTRWGGRSCAAR HHHHHHHCCCCHHHHHHHHHCCCCCCCCEEECCCCCEECCCCCCCCCCC >Mature Secondary Structure ARAMTKRRATQPARRVGATLALAVAVTCAAAGMATRAHAAAAGAADAASTGCSAAWPRW CCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCH DAFKRDFISADGRVIDVGSADSRTVSEGQAYGLFFALVANDRRMFDTILAWTENNLAQGD HHHHHHHHCCCCCEEECCCCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHCCCCCCCCC LSAHLPAWLWGRAPDGAWRVLDANPASDADLWIAYALVEAGRLWHERSYTARGALLAKRV HHHCCCHHEECCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH LDAETATVPGLGLTLLPGPTGFKLANGQWRVNPSYSPPQVIRALGARLPDDRRWAALASS HCCHHCCCCCCCEEECCCCCCCEECCCEEEECCCCCCHHHHHHHHCCCCCCHHHHHHHHC TARVLLDTAPKGFSPDWALYRAGNGFGPDPQTHAESAYNAIRVYLWAGMLDRADPLAAPL CCEEEEECCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH LAKFAPFADHIAAHGAPPEKVDTTTGVAGPNDGNGGFSAAAVPFLDARGQHALADAQAAR HHHHCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCHHCCCCCHHHHHHHHHH VDTLARQSAPGYYTSVLTLFGLGWRDGRYRFGADGTLDTRWGGRSCAAR HHHHHHHCCCCHHHHHHHHHCCCCCCCCEEECCCCCEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]