| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
Click here to switch to the map view.
The map label for this gene is 116689399
Identifier: 116689399
GI number: 116689399
Start: 1515999
End: 1516451
Strand: Direct
Name: 116689399
Synonym: Bcen2424_1377
Alternate gene names: NA
Gene position: 1515999-1516451 (Clockwise)
Preceding gene: 116689398
Following gene: 116689401
Centisome position: 43.51
GC content: 77.04
Gene sequence:
>453_bases ATGCGCGATCCGTCCGCTCCGTTCAGGATTGCCGCCGCACGCGGCGCGCTCGATGCGGGCGCATGGGCGCTCGCGGCAGC GCTGGTCGCGGCCGGCGCGGGCGGGTGGGTCGCGACGGGCTGGGCGGCGCCGACGCTTGCCCGCGTGCTGCTGGCCATCG TCAGCACGGGGTCGGGGATCGCGGCGCTGTGGTACGCGGTGCGCATCGCGATCGATCGGCGGTTGTTCGCCGCGCTGGCC CGGGCGGTGGACGGCGCCGGGTCGATCGACGACGGGCTCGCGGCGCTCGACCGCGCGCTCGCCGACCTGGGCTGGATCGA TGCGGCGAAGGTCGGGCGCACGCTCGACGCGCGCGTGCGCGGCGCGGTCGGGCTGTGCCGGGCCGCCGTGCTCGTGGCGA TCGTGCAGTGGCTCGTCGTCGGGATCGCGGTCGCGGTGTCGCCCATCGGCTAG
Upstream 100 bases:
>100_bases CCGCGGTGCGCGCGGTCCGGCCACGCGCGGTATGGTCGGATGAAAGCGTGGCCGTGCTGCAGCAGTGGATCGATCGCCAG CGCGGCGCGGGGCAGGGGTG
Downstream 100 bases:
>100_bases CGCCGGCGCAAGCCGGCTATCGGCGGGAACAGCCCGGCCGGCGCGCGCCAGCCGTCATGCGTGCGCGGTGCGCCGCGATC GCTTGGCTTCGTACATCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 150; Mature: 150
Protein sequence:
>150_residues MRDPSAPFRIAAARGALDAGAWALAAALVAAGAGGWVATGWAAPTLARVLLAIVSTGSGIAALWYAVRIAIDRRLFAALA RAVDGAGSIDDGLAALDRALADLGWIDAAKVGRTLDARVRGAVGLCRAAVLVAIVQWLVVGIAVAVSPIG
Sequences:
>Translated_150_residues MRDPSAPFRIAAARGALDAGAWALAAALVAAGAGGWVATGWAAPTLARVLLAIVSTGSGIAALWYAVRIAIDRRLFAALA RAVDGAGSIDDGLAALDRALADLGWIDAAKVGRTLDARVRGAVGLCRAAVLVAIVQWLVVGIAVAVSPIG >Mature_150_residues MRDPSAPFRIAAARGALDAGAWALAAALVAAGAGGWVATGWAAPTLARVLLAIVSTGSGIAALWYAVRIAIDRRLFAALA RAVDGAGSIDDGLAALDRALADLGWIDAAKVGRTLDARVRGAVGLCRAAVLVAIVQWLVVGIAVAVSPIG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15019; Mature: 15019
Theoretical pI: Translated: 11.06; Mature: 11.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRDPSAPFRIAAARGALDAGAWALAAALVAAGAGGWVATGWAAPTLARVLLAIVSTGSGI CCCCCCCEEHHHHHCCCCHHHHHHHHHHHHCCCCCCHHCCCCHHHHHHHHHHHHHCCCCH AALWYAVRIAIDRRLFAALARAVDGAGSIDDGLAALDRALADLGWIDAAKVGRTLDARVR HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHH GAVGLCRAAVLVAIVQWLVVGIAVAVSPIG HHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MRDPSAPFRIAAARGALDAGAWALAAALVAAGAGGWVATGWAAPTLARVLLAIVSTGSGI CCCCCCCEEHHHHHCCCCHHHHHHHHHHHHCCCCCCHHCCCCHHHHHHHHHHHHHCCCCH AALWYAVRIAIDRRLFAALARAVDGAGSIDDGLAALDRALADLGWIDAAKVGRTLDARVR HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHH GAVGLCRAAVLVAIVQWLVVGIAVAVSPIG HHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA