Click here to switch to the map view.

The map label for this gene is ynbC [H]

Identifier: 116689397

GI number: 116689397

Start: 1512818

End: 1514587

Strand: Direct

Name: ynbC [H]

Synonym: Bcen2424_1375

Alternate gene names: 116689397

Gene position: 1512818-1514587 (Clockwise)

Preceding gene: 116689396

Following gene: 116689398

Centisome position: 43.42

GC content: 71.3

Gene sequence:

>1770_bases
ATGAGCGCACGCACGGCCCGCGAGGCCGACTTCATCACGCACGACGGCGAAACGCTGTTCTATCGTCACTGGCCCGCGAC
GGGCGCACGCTGCCGCGGCGCCATCGTGCTGCTGCATCGCGGGCACGAACACTCGGCGCGCGTCGCGCACCTCGTCGACG
AGCTCGACCTGCCGGATTTCGCGTTTTTTGCGTGGGACGCACGCGGCCACGGCCGCTCGCCGGGCGCGCGTGGCTACAGC
CCGAGCGCGGCCGCGTCGGTGCGCGACCTGCAGACCTTCGTCGAGCATATCCGCGACACGCACGGCATCGCGATCGAGGA
GATGGCGGTAGTCGGCCAGAGCGTCGGCGCGGTGCTCGCGGCGACCTGGGTACACGACTACGCGCCGCCGATCCGCGCGC
TCGTGGTCGCGTCGCCGGCGTTCCACATCAAGCTCTACGTGCCGTTCGCGCGGCCGGGGCTGCGGCTGATGCACAAGCTG
CGCGGGCTGTTCTACGTGAACAGCTACGTGAAGCCGAAATTCCTCACGCACGATCCCGAGCGGATCGCGAGCTACGCGTC
CGATCCGCTGATCACGCGGCCGATCGCGGTCAACATGCTGCTCGACCTGCACGATACCGCGCAGCGCATCGTCGCCGACG
CGGCCGCGATCACCGTGCCGACGCTGTTGCTGATCTCGGGCGCCGACTGGGTCGTGCATCGCGGCCCGCAGGACCGCTTC
TTCGAGCGGCTCGGCGCGGCGCGCAAGGAGCGCATCGTGCTGCCGGGCTTCTATCACGACACGCTCGGCGAGCGCGACCG
CGCGCAGGCGCTCGCGCCGCTGCGGGCGTTCGTGCTGCGCGAGTTCGATGCGCCGAGCCCGCGCGTGTCGCTCGCCGATG
CCGACCGGCGCGGCGCGTTCCATGACGAATACGCGGCGCTCTCCCGGCCGCCGGCGAACGTGTTCGCACGGGCGTACTGG
GCGCTCACGCGCGCCGGCCTGAAAGCCGGCGGCGCGCTGTCGGACGGCATCGCGCTCGGGTTGCGGCTCGGCTTCGATTC
GGGCTCGACGCTCGACTACGTGTACCGCAACCGCGCGCAGGGGCGGCTGGGCATCGGCGCGCTGATCGACCGCACGTATC
TCGATTCGCCGGGCTGGGTCGGCATCCGCCAGCGCAAGGTGCATCTGCAGGAGCTGATCGGCGCGGCGATCGGCCGGCTG
CGCGGGAACGGCACGCCGGTGCGGATCGTCGACATCGCCGCCGGCCACGGGCGCTACGTGCTCGATGCGATCGCGCTGGC
CGCCGAGCGCGATGGCGCGGCGCCCGACGACATCACGCTGCGCGACTACAGTCCGCCGAACGTCGAGGCCGGGCGCGTGC
TGATCGCGCAGCGCGGCCTCGAGCCGATCGCGCGCTTCGAGCGCGGCGACGCGTTCGACGAGGCGTCGCTCGCGACGCTC
GAGCCGCGGCCGACGCTGGCGATCGTGTCGGGCCTGTACGAGCTGTTCGGCGAGAACGCGCTGATCGAGCGCTCGCTGCG
CGGGCTCGCGCAGGCCGTACCGCCGGGCGGCTATCTCGTCTATACGGGGCAGCCGTGGCATCCGCAGCTCGAATTCATCG
CGCGTGCGCTGAACAACCATCGCGGCGAGTCGACCTGGGTGATGCGTCGCCGTTCGCAGGCCGAAATGGACGAACTCGTC
GCGCGGGCGGGGTTCCGCAAGCTCGACCAGCGGATCGACGAGATGGGCATCTTCACGGTCAGCCTCGCGCAGCGGGTCGA
TGCGTCATGA

Upstream 100 bases:

>100_bases
TGCGGCGCGTCCGGGCCGGGATCACCGAAGCGGGCGGCTGACGGGCCGGGCGCCGGAGGGCGGCGCCACACGATACGTAT
AACGAAACGAGAGAGATCGC

Downstream 100 bases:

>100_bases
GCGTGTTCGGCGGCGGCGCGGGCGCGGAGGCGAGTGACGGGCTGGCCGAACCGGCGGCCGGCGCGCGCGACGCGTCGTTC
GTGCTGCGCCTGGGCTGGCT

Product: alpha/beta hydrolase fold

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 589; Mature: 588

Protein sequence:

>589_residues
MSARTAREADFITHDGETLFYRHWPATGARCRGAIVLLHRGHEHSARVAHLVDELDLPDFAFFAWDARGHGRSPGARGYS
PSAAASVRDLQTFVEHIRDTHGIAIEEMAVVGQSVGAVLAATWVHDYAPPIRALVVASPAFHIKLYVPFARPGLRLMHKL
RGLFYVNSYVKPKFLTHDPERIASYASDPLITRPIAVNMLLDLHDTAQRIVADAAAITVPTLLLISGADWVVHRGPQDRF
FERLGAARKERIVLPGFYHDTLGERDRAQALAPLRAFVLREFDAPSPRVSLADADRRGAFHDEYAALSRPPANVFARAYW
ALTRAGLKAGGALSDGIALGLRLGFDSGSTLDYVYRNRAQGRLGIGALIDRTYLDSPGWVGIRQRKVHLQELIGAAIGRL
RGNGTPVRIVDIAAGHGRYVLDAIALAAERDGAAPDDITLRDYSPPNVEAGRVLIAQRGLEPIARFERGDAFDEASLATL
EPRPTLAIVSGLYELFGENALIERSLRGLAQAVPPGGYLVYTGQPWHPQLEFIARALNNHRGESTWVMRRRSQAEMDELV
ARAGFRKLDQRIDEMGIFTVSLAQRVDAS

Sequences:

>Translated_589_residues
MSARTAREADFITHDGETLFYRHWPATGARCRGAIVLLHRGHEHSARVAHLVDELDLPDFAFFAWDARGHGRSPGARGYS
PSAAASVRDLQTFVEHIRDTHGIAIEEMAVVGQSVGAVLAATWVHDYAPPIRALVVASPAFHIKLYVPFARPGLRLMHKL
RGLFYVNSYVKPKFLTHDPERIASYASDPLITRPIAVNMLLDLHDTAQRIVADAAAITVPTLLLISGADWVVHRGPQDRF
FERLGAARKERIVLPGFYHDTLGERDRAQALAPLRAFVLREFDAPSPRVSLADADRRGAFHDEYAALSRPPANVFARAYW
ALTRAGLKAGGALSDGIALGLRLGFDSGSTLDYVYRNRAQGRLGIGALIDRTYLDSPGWVGIRQRKVHLQELIGAAIGRL
RGNGTPVRIVDIAAGHGRYVLDAIALAAERDGAAPDDITLRDYSPPNVEAGRVLIAQRGLEPIARFERGDAFDEASLATL
EPRPTLAIVSGLYELFGENALIERSLRGLAQAVPPGGYLVYTGQPWHPQLEFIARALNNHRGESTWVMRRRSQAEMDELV
ARAGFRKLDQRIDEMGIFTVSLAQRVDAS
>Mature_588_residues
SARTAREADFITHDGETLFYRHWPATGARCRGAIVLLHRGHEHSARVAHLVDELDLPDFAFFAWDARGHGRSPGARGYSP
SAAASVRDLQTFVEHIRDTHGIAIEEMAVVGQSVGAVLAATWVHDYAPPIRALVVASPAFHIKLYVPFARPGLRLMHKLR
GLFYVNSYVKPKFLTHDPERIASYASDPLITRPIAVNMLLDLHDTAQRIVADAAAITVPTLLLISGADWVVHRGPQDRFF
ERLGAARKERIVLPGFYHDTLGERDRAQALAPLRAFVLREFDAPSPRVSLADADRRGAFHDEYAALSRPPANVFARAYWA
LTRAGLKAGGALSDGIALGLRLGFDSGSTLDYVYRNRAQGRLGIGALIDRTYLDSPGWVGIRQRKVHLQELIGAAIGRLR
GNGTPVRIVDIAAGHGRYVLDAIALAAERDGAAPDDITLRDYSPPNVEAGRVLIAQRGLEPIARFERGDAFDEASLATLE
PRPTLAIVSGLYELFGENALIERSLRGLAQAVPPGGYLVYTGQPWHPQLEFIARALNNHRGESTWVMRRRSQAEMDELVA
RAGFRKLDQRIDEMGIFTVSLAQRVDAS

Specific function: Unknown

COG id: COG2267

COG function: function code I; Lysophospholipase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI6005786, Length=255, Percent_Identity=27.0588235294118, Blast_Score=66, Evalue=7e-11,
Organism=Homo sapiens, GI51242953, Length=255, Percent_Identity=27.0588235294118, Blast_Score=66, Evalue=8e-11,
Organism=Escherichia coli, GI1787678, Length=587, Percent_Identity=56.8994889267462, Blast_Score=647, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022742
- InterPro:   IPR022744 [H]

Pfam domain/function: PF12146 Hydrolase_4; PF12147 Hydrolase_5 [H]

EC number: NA

Molecular weight: Translated: 64821; Mature: 64689

Theoretical pI: Translated: 9.23; Mature: 9.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSARTAREADFITHDGETLFYRHWPATGARCRGAIVLLHRGHEHSARVAHLVDELDLPDF
CCCCCCCCCCCEEECCCEEEEEECCCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCE
AFFAWDARGHGRSPGARGYSPSAAASVRDLQTFVEHIRDTHGIAIEEMAVVGQSVGAVLA
EEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
ATWVHDYAPPIRALVVASPAFHIKLYVPFARPGLRLMHKLRGLFYVNSYVKPKFLTHDPE
HHHHHHCCCHHHEEEEECCCEEEEEEEECCCCHHHHHHHHHHHHEECCCCCCCCCCCCHH
RIASYASDPLITRPIAVNMLLDLHDTAQRIVADAAAITVPTLLLISGADWVVHRGPQDRF
HHHHHCCCCCEECCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEECCCHHHH
FERLGAARKERIVLPGFYHDTLGERDRAQALAPLRAFVLREFDAPSPRVSLADADRRGAF
HHHHCCCCCCEEEECCCHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCC
HDEYAALSRPPANVFARAYWALTRAGLKAGGALSDGIALGLRLGFDSGSTLDYVYRNRAQ
CHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCHHHHHHCCCC
GRLGIGALIDRTYLDSPGWVGIRQRKVHLQELIGAAIGRLRGNGTPVRIVDIAAGHGRYV
CCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHH
LDAIALAAERDGAAPDDITLRDYSPPNVEAGRVLIAQRGLEPIARFERGDAFDEASLATL
HHHHHHHHHCCCCCCCCEEECCCCCCCCCCCEEEEECCCCHHHHHHHCCCCCCCCCEEEE
EPRPTLAIVSGLYELFGENALIERSLRGLAQAVPPGGYLVYTGQPWHPQLEFIARALNNH
CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHCC
RGESTWVMRRRSQAEMDELVARAGFRKLDQRIDEMGIFTVSLAQRVDAS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCC
>Mature Secondary Structure 
SARTAREADFITHDGETLFYRHWPATGARCRGAIVLLHRGHEHSARVAHLVDELDLPDF
CCCCCCCCCCEEECCCEEEEEECCCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCE
AFFAWDARGHGRSPGARGYSPSAAASVRDLQTFVEHIRDTHGIAIEEMAVVGQSVGAVLA
EEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
ATWVHDYAPPIRALVVASPAFHIKLYVPFARPGLRLMHKLRGLFYVNSYVKPKFLTHDPE
HHHHHHCCCHHHEEEEECCCEEEEEEEECCCCHHHHHHHHHHHHEECCCCCCCCCCCCHH
RIASYASDPLITRPIAVNMLLDLHDTAQRIVADAAAITVPTLLLISGADWVVHRGPQDRF
HHHHHCCCCCEECCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEECCCHHHH
FERLGAARKERIVLPGFYHDTLGERDRAQALAPLRAFVLREFDAPSPRVSLADADRRGAF
HHHHCCCCCCEEEECCCHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCC
HDEYAALSRPPANVFARAYWALTRAGLKAGGALSDGIALGLRLGFDSGSTLDYVYRNRAQ
CHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCHHHHHHCCCC
GRLGIGALIDRTYLDSPGWVGIRQRKVHLQELIGAAIGRLRGNGTPVRIVDIAAGHGRYV
CCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHH
LDAIALAAERDGAAPDDITLRDYSPPNVEAGRVLIAQRGLEPIARFERGDAFDEASLATL
HHHHHHHHHCCCCCCCCEEECCCCCCCCCCCEEEEECCCCHHHHHHHCCCCCCCCCEEEE
EPRPTLAIVSGLYELFGENALIERSLRGLAQAVPPGGYLVYTGQPWHPQLEFIARALNNH
CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHCC
RGESTWVMRRRSQAEMDELVARAGFRKLDQRIDEMGIFTVSLAQRVDAS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]