| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116689386
Identifier: 116689386
GI number: 116689386
Start: 1502942
End: 1503367
Strand: Direct
Name: 116689386
Synonym: Bcen2424_1364
Alternate gene names: NA
Gene position: 1502942-1503367 (Clockwise)
Preceding gene: 116689384
Following gene: 116689387
Centisome position: 43.14
GC content: 63.85
Gene sequence:
>426_bases ATGAGTCTTTCCCCGTTTCACCTGGCGATTCCGGTCTACGACCTGCCGGCCGCGCGCGATTTCTACGGCCGCGTGTTCGG GCTGGAAGAGGGGCGCTCGAGCGCGCAGTGGGTCGATTTCAACTTTTACGGGCATCAGCTCGTGATCCACGAGCATCCGA AAACCGCATCGGAGGAAGGCGCGCATACGAATGCGGTCGACGGCCACGACGTGCCGGTGCCGCATTTCGGGATCGTGCTC GACTGGGCGAGCTGGGAAGCGCTGGCCGAGCGGCTGCGCGGGTTCGGCGTGACCTTCGTGATCGAGCCGTACGTGCGGTT TCAGGGGCAGGTCGGCGAACAGGCGACGATGTTCCTGTTCGATCCGTGCGGCAATGCGCTCGAATTCAAGGCGTTCCGCG ACATCGGCCAGCTGTTCGCGAAGTGA
Upstream 100 bases:
>100_bases TTTGTGAATCGCAAAACTATATATTGATTTAATTTTTGCTCGGCGTTGTCTACCATGATGCCGTTCTCGCGTCACGCGAG CGTTTCTTCACGAGGCCATC
Downstream 100 bases:
>100_bases CTGGCCGCGGCGCCAGCGCCGATCGACATTGGGTGCGAGAATGCGGCCTTCGGCCCGGCCGCGCGCAGTTGCGGCGACCG GCGCCGCGCCGCACGGCATC
Product: glyoxalase/bleomycin resistance protein/dioxygenase
Products: NA
Alternate protein names: Glyoxalase Family Protein; Ring-Cleaving Dioxygenase; Dioxygenase; Extradiol Dioxygenase Family Protein; Dioxygenase/Glyoxalase; Glyoxalase/Extradiol Ring-Cleavage Dioxygenase; Glyoxalase Domain Protein; Dioxygenase Of Extradiol Dioxygenase Family Protein; Glyoxalase/Bleomycin Resistance Protein; Dioxygenase Protein; Glyoxalase; Glyoxalase/Bleomycin Resistance; Extradiol Family Dioxygenase; Lactoylglutathione Lyase Protein; Extradiol Dioxygenase
Number of amino acids: Translated: 141; Mature: 140
Protein sequence:
>141_residues MSLSPFHLAIPVYDLPAARDFYGRVFGLEEGRSSAQWVDFNFYGHQLVIHEHPKTASEEGAHTNAVDGHDVPVPHFGIVL DWASWEALAERLRGFGVTFVIEPYVRFQGQVGEQATMFLFDPCGNALEFKAFRDIGQLFAK
Sequences:
>Translated_141_residues MSLSPFHLAIPVYDLPAARDFYGRVFGLEEGRSSAQWVDFNFYGHQLVIHEHPKTASEEGAHTNAVDGHDVPVPHFGIVL DWASWEALAERLRGFGVTFVIEPYVRFQGQVGEQATMFLFDPCGNALEFKAFRDIGQLFAK >Mature_140_residues SLSPFHLAIPVYDLPAARDFYGRVFGLEEGRSSAQWVDFNFYGHQLVIHEHPKTASEEGAHTNAVDGHDVPVPHFGIVLD WASWEALAERLRGFGVTFVIEPYVRFQGQVGEQATMFLFDPCGNALEFKAFRDIGQLFAK
Specific function: Unknown
COG id: COG3565
COG function: function code R; Predicted dioxygenase of extradiol dioxygenase family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15857; Mature: 15726
Theoretical pI: Translated: 5.14; Mature: 5.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLSPFHLAIPVYDLPAARDFYGRVFGLEEGRSSAQWVDFNFYGHQLVIHEHPKTASEEG CCCCCEEEEEEEEECCCCCCHHHEEECCCCCCCCCEEEEEEECCCEEEEECCCCCCCCCC AHTNAVDGHDVPVPHFGIVLDWASWEALAERLRGFGVTFVIEPYVRFQGQVGEQATMFLF CCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHCCCEEEEEECCEEECCCCCCCEEEEEE DPCGNALEFKAFRDIGQLFAK CCCCCEEHHHHHHHHHHHHCC >Mature Secondary Structure SLSPFHLAIPVYDLPAARDFYGRVFGLEEGRSSAQWVDFNFYGHQLVIHEHPKTASEEG CCCCEEEEEEEEECCCCCCHHHEEECCCCCCCCCEEEEEEECCCEEEEECCCCCCCCCC AHTNAVDGHDVPVPHFGIVLDWASWEALAERLRGFGVTFVIEPYVRFQGQVGEQATMFLF CCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHCCCEEEEEECCEEECCCCCCCEEEEEE DPCGNALEFKAFRDIGQLFAK CCCCCEEHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA