| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116689376
Identifier: 116689376
GI number: 116689376
Start: 1493223
End: 1493558
Strand: Direct
Name: 116689376
Synonym: Bcen2424_1354
Alternate gene names: NA
Gene position: 1493223-1493558 (Clockwise)
Preceding gene: 116689375
Following gene: 116689378
Centisome position: 42.86
GC content: 68.45
Gene sequence:
>336_bases ATGAAGAACACGATCGCGATGCTCGTTGCACTCGTTGCGAGTGCAACTTTTGCAGGATGTGCGGACATGGACACGAAACA CCCCAACGCCACCGCGGGCGGCGCGGCCAGGCCCCCTCTGCAGTCGGGCGCCGCGCAGGCATGCAAGGCGGACGCCGCAC CGGACGATGCGCTGGTCGGCAAGACCGAGGCCGATGCGACCGCGCTGCTCGACGGCTGCCTGTGGCGCGTGCTCGAGCGC GACGGCAAGTCGTTGCCGGGCACGATGGACTACCGCGAGGAGCGCCGCAATCTCGGCATTCGCGACGGCAAGGTGATCTG GGTGCGGCGCGGGTGA
Upstream 100 bases:
>100_bases AGGAAACGGCCGGCAGCGTGCGGAATCGATCACGCATGCGATGCCCGGTCGTGCACGAGTGCCGCACATGGACCGCCGGG CCCGCGACAGGGAGAAACCG
Downstream 100 bases:
>100_bases GGGCCGTGTGACGATTGCGTCACCGGAATCGTCGACGTCGCGCGATCTGCGCGGGTATGTCATGAAGCCCGGCGCGTCGG AACTGCCGCTGACCGCACGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 111; Mature: 111
Protein sequence:
>111_residues MKNTIAMLVALVASATFAGCADMDTKHPNATAGGAARPPLQSGAAQACKADAAPDDALVGKTEADATALLDGCLWRVLER DGKSLPGTMDYREERRNLGIRDGKVIWVRRG
Sequences:
>Translated_111_residues MKNTIAMLVALVASATFAGCADMDTKHPNATAGGAARPPLQSGAAQACKADAAPDDALVGKTEADATALLDGCLWRVLER DGKSLPGTMDYREERRNLGIRDGKVIWVRRG >Mature_111_residues MKNTIAMLVALVASATFAGCADMDTKHPNATAGGAARPPLQSGAAQACKADAAPDDALVGKTEADATALLDGCLWRVLER DGKSLPGTMDYREERRNLGIRDGKVIWVRRG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11682; Mature: 11682
Theoretical pI: Translated: 8.05; Mature: 8.05
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNTIAMLVALVASATFAGCADMDTKHPNATAGGAARPPLQSGAAQACKADAAPDDALVG CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCC KTEADATALLDGCLWRVLERDGKSLPGTMDYREERRNLGIRDGKVIWVRRG CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCEEEEECC >Mature Secondary Structure MKNTIAMLVALVASATFAGCADMDTKHPNATAGGAARPPLQSGAAQACKADAAPDDALVG CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCC KTEADATALLDGCLWRVLERDGKSLPGTMDYREERRNLGIRDGKVIWVRRG CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA