| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is pstC [H]
Identifier: 116689323
GI number: 116689323
Start: 1432438
End: 1433424
Strand: Direct
Name: pstC [H]
Synonym: Bcen2424_1301
Alternate gene names: 116689323
Gene position: 1432438-1433424 (Clockwise)
Preceding gene: 116689322
Following gene: 116689324
Centisome position: 41.12
GC content: 64.13
Gene sequence:
>987_bases ATGTCTGATATTTCATACACGTCCTCCCGATCGCCCGACAGCGCGCAGCAGCGCGCGCCGAGCCGTCTCGGGGATGTCCT GTTCGGCGGCCTCGCACGGCTCGCCGCGATCGTGACCCTGCTGCTGCTTGGCGGGATCATCGTTTCCCTGATCATTGCGT CGTTGCCGACCATCCAGAAGTTCGGCCTCGGCTTCCTGTGGCAATCCGAGTGGGACCCCAACTCGGACATCTATGGCGCA CTCGTGCCGATCTACGGCACGATCGTGACGTCGCTGATCGCACTCGTCATCGCGGTGCCGGTCAGTTTCGGCATCGCACT GTTCCTCACCGAGCTGGCGCCCGTGTGGCTGCGCCGTCCGCTCGGCATCGCGATCGAGCTGCTCGCCGCGATTCCGTCGA TCGTGTACGGCATGTGGGGCCTGCTCGTGTTCGCGCCGATCTTCGCCGAATACTTCCAGAAGCCGCTCGGCCGCCTGCTC AAGGACGTGTGGGTGCTCGGCCCGCTGACGTCCGGCGCGCCGATCGGTATCGGCATCCTCGCGGCCGGCGTGATCCTCGC GATCATGATCATCCCGTACATCGCATCGGTGATGCGCGACGTGTTCGAGGTCACGCCGGTGCTGCTGAAGGAATCGGCAT ACGGGATCGGCTGCACGACCTGGGAAGTGATGTGGAAGGTCGTGCTGCCCTACACGAAGACCGGCGTGATCGGCGGCGTG ATGCTCGGCCTCGGCCGCGCGCTCGGCGAAACGATGGCCGTGACCTTCGTGATCGGCAACACGAACCTGCTCGACAGCGT GTCGCTGTTCGCGCCGGGCAACAGCATCACGTCGGCGCTCGCGAACGAATTCGCGGAAGCGCAGCCGGGCCTGCATACGT CCGCGCTGATGGAACTCGGCCTGATCCTGTTCGTGATCACGTTCATCGTGCTGTCCATCTCCAAACTGCTGCTGCTTCGT CTCGAGAAGGGAGAGGGCAAGAAATGA
Upstream 100 bases:
>100_bases GAGTAAGCCATCCAGCGGTTCGCTGCCCGGCCGTGCCGGTCGGGCAGTGTGTGCGGTAAAGCCGGGCGTTACGGCGCCCG GCGATCAAAAGCAGGCACCC
Downstream 100 bases:
>100_bases GCGAGCCCATCATGAATTTCCCGGGGCCGGACGGCGCCGCGCTCGACGCGATGCGCAACCGCCTGCAGCGCAAGCGCAAG GCCGTCAACGCGATCGCGCT
Product: phosphate transporter permease subunit PstC
Products: ADP; phosphate [Cytoplasm]; phosphate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 328; Mature: 327
Protein sequence:
>328_residues MSDISYTSSRSPDSAQQRAPSRLGDVLFGGLARLAAIVTLLLLGGIIVSLIIASLPTIQKFGLGFLWQSEWDPNSDIYGA LVPIYGTIVTSLIALVIAVPVSFGIALFLTELAPVWLRRPLGIAIELLAAIPSIVYGMWGLLVFAPIFAEYFQKPLGRLL KDVWVLGPLTSGAPIGIGILAAGVILAIMIIPYIASVMRDVFEVTPVLLKESAYGIGCTTWEVMWKVVLPYTKTGVIGGV MLGLGRALGETMAVTFVIGNTNLLDSVSLFAPGNSITSALANEFAEAQPGLHTSALMELGLILFVITFIVLSISKLLLLR LEKGEGKK
Sequences:
>Translated_328_residues MSDISYTSSRSPDSAQQRAPSRLGDVLFGGLARLAAIVTLLLLGGIIVSLIIASLPTIQKFGLGFLWQSEWDPNSDIYGA LVPIYGTIVTSLIALVIAVPVSFGIALFLTELAPVWLRRPLGIAIELLAAIPSIVYGMWGLLVFAPIFAEYFQKPLGRLL KDVWVLGPLTSGAPIGIGILAAGVILAIMIIPYIASVMRDVFEVTPVLLKESAYGIGCTTWEVMWKVVLPYTKTGVIGGV MLGLGRALGETMAVTFVIGNTNLLDSVSLFAPGNSITSALANEFAEAQPGLHTSALMELGLILFVITFIVLSISKLLLLR LEKGEGKK >Mature_327_residues SDISYTSSRSPDSAQQRAPSRLGDVLFGGLARLAAIVTLLLLGGIIVSLIIASLPTIQKFGLGFLWQSEWDPNSDIYGAL VPIYGTIVTSLIALVIAVPVSFGIALFLTELAPVWLRRPLGIAIELLAAIPSIVYGMWGLLVFAPIFAEYFQKPLGRLLK DVWVLGPLTSGAPIGIGILAAGVILAIMIIPYIASVMRDVFEVTPVLLKESAYGIGCTTWEVMWKVVLPYTKTGVIGGVM LGLGRALGETMAVTFVIGNTNLLDSVSLFAPGNSITSALANEFAEAQPGLHTSALMELGLILFVITFIVLSISKLLLLRL EKGEGKK
Specific function: Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0573
COG function: function code P; ABC-type phosphate transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1790164, Length=309, Percent_Identity=75.0809061488673, Blast_Score=468, Evalue=1e-133,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR011864 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 34940; Mature: 34809
Theoretical pI: Translated: 5.98; Mature: 5.98
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDISYTSSRSPDSAQQRAPSRLGDVLFGGLARLAAIVTLLLLGGIIVSLIIASLPTIQK CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH FGLGFLWQSEWDPNSDIYGALVPIYGTIVTSLIALVIAVPVSFGIALFLTELAPVWLRRP HCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH LGIAIELLAAIPSIVYGMWGLLVFAPIFAEYFQKPLGRLLKDVWVLGPLTSGAPIGIGIL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH AAGVILAIMIIPYIASVMRDVFEVTPVLLKESAYGIGCTTWEVMWKVVLPYTKTGVIGGV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHH MLGLGRALGETMAVTFVIGNTNLLDSVSLFAPGNSITSALANEFAEAQPGLHTSALMELG HHHHHHHHHHHHEEEEEECCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHH LILFVITFIVLSISKLLLLRLEKGEGKK HHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure SDISYTSSRSPDSAQQRAPSRLGDVLFGGLARLAAIVTLLLLGGIIVSLIIASLPTIQK CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH FGLGFLWQSEWDPNSDIYGALVPIYGTIVTSLIALVIAVPVSFGIALFLTELAPVWLRRP HCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH LGIAIELLAAIPSIVYGMWGLLVFAPIFAEYFQKPLGRLLKDVWVLGPLTSGAPIGIGIL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH AAGVILAIMIIPYIASVMRDVFEVTPVLLKESAYGIGCTTWEVMWKVVLPYTKTGVIGGV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHH MLGLGRALGETMAVTFVIGNTNLLDSVSLFAPGNSITSALANEFAEAQPGLHTSALMELG HHHHHHHHHHHHEEEEEECCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHH LILFVITFIVLSISKLLLLRLEKGEGKK HHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; phosphate [Periplasm]; H2O [C]
Specific reaction: ATP + phosphate [Periplasm] + H2O = ADP + phosphate [Cytoplasm] + phosphate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]