| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
Click here to switch to the map view.
The map label for this gene is 116689316
Identifier: 116689316
GI number: 116689316
Start: 1424539
End: 1424997
Strand: Direct
Name: 116689316
Synonym: Bcen2424_1294
Alternate gene names: NA
Gene position: 1424539-1424997 (Clockwise)
Preceding gene: 116689315
Following gene: 116689318
Centisome position: 40.89
GC content: 65.58
Gene sequence:
>459_bases ATGCCGCATCGCGTGTTCCGTCTGCTGTCGGCCGTATGGGTCGGCAGCCTGCTGACGATCGGGTATGCGGTCGCGCCCGT ATTGTTCAAGACGCTGGAACGGATGACGGCCGGTTCGGTCGCCGCCCAGCTGTTCCGTATCGAGGCGATCCTCGGCGTCG TGTGCGGCGTGCTGCTGCTCGCGTTGTCGAATCAGCAGGTGCGGCGCGGCAGCAGCGAGTATCGCCGCGTGCGCTGGATC GTCGCCGCGATGGTCGTATGCGTGCTGGTCGGGTATTTTGCGCTGCAGCCGTTCATGAACGCGCTGCGCGTGGCCGCGAT GGATGCGGGCACCGATATCGCGAATTCGCCGTATGCGAGCCGCTTCGGGATGCTGCACGGCGTCTCGAGCGTGTTCTATC TCGTCGAAAGCGTGCTGGGGCTGATGCTGATCTGGCGTCTACCGGCGCGCGACGCCTGA
Upstream 100 bases:
>100_bases TCGGCAAGTCCGAAGGCGACGTCGCGGCCGTGCAGGCGCCGAGCGGCGTGCGCGAGTACGAAATCATCTCGGTCAGCTAC ATCTGAAGCGGGGCGACGTG
Downstream 100 bases:
>100_bases GCGCTCGTCGTTGCGCGTTGCGCAACGATGGGGCAGGGCGGCACGGGAATCCGTGCCGCACCGGCGGGTTACTTGTCCTG GAACGGCCGCTTGGTGCTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 152; Mature: 151
Protein sequence:
>152_residues MPHRVFRLLSAVWVGSLLTIGYAVAPVLFKTLERMTAGSVAAQLFRIEAILGVVCGVLLLALSNQQVRRGSSEYRRVRWI VAAMVVCVLVGYFALQPFMNALRVAAMDAGTDIANSPYASRFGMLHGVSSVFYLVESVLGLMLIWRLPARDA
Sequences:
>Translated_152_residues MPHRVFRLLSAVWVGSLLTIGYAVAPVLFKTLERMTAGSVAAQLFRIEAILGVVCGVLLLALSNQQVRRGSSEYRRVRWI VAAMVVCVLVGYFALQPFMNALRVAAMDAGTDIANSPYASRFGMLHGVSSVFYLVESVLGLMLIWRLPARDA >Mature_151_residues PHRVFRLLSAVWVGSLLTIGYAVAPVLFKTLERMTAGSVAAQLFRIEAILGVVCGVLLLALSNQQVRRGSSEYRRVRWIV AAMVVCVLVGYFALQPFMNALRVAAMDAGTDIANSPYASRFGMLHGVSSVFYLVESVLGLMLIWRLPARDA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16660; Mature: 16529
Theoretical pI: Translated: 10.50; Mature: 10.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPHRVFRLLSAVWVGSLLTIGYAVAPVLFKTLERMTAGSVAAQLFRIEAILGVVCGVLLL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALSNQQVRRGSSEYRRVRWIVAAMVVCVLVGYFALQPFMNALRVAAMDAGTDIANSPYAS HHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH RFGMLHGVSSVFYLVESVLGLMLIWRLPARDA HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure PHRVFRLLSAVWVGSLLTIGYAVAPVLFKTLERMTAGSVAAQLFRIEAILGVVCGVLLL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALSNQQVRRGSSEYRRVRWIVAAMVVCVLVGYFALQPFMNALRVAAMDAGTDIANSPYAS HHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH RFGMLHGVSSVFYLVESVLGLMLIWRLPARDA HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA