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The map label for this gene is mdcC [H]

Identifier: 116689292

GI number: 116689292

Start: 1401670

End: 1401984

Strand: Direct

Name: mdcC [H]

Synonym: Bcen2424_1270

Alternate gene names: 116689292

Gene position: 1401670-1401984 (Clockwise)

Preceding gene: 116689291

Following gene: 116689293

Centisome position: 40.23

GC content: 69.84

Gene sequence:

>315_bases
ATGGAACAGTTGAACTATCGCTTCACCGCGCGCGAACGCGCGAAGGGCGAGCAGGCCGCGGCGCTCGTCGGCGTGGTCGC
GTCCGGCAATCTCGAAGTGCTGGTCGAACGCGTGCTGCCGGGCAACGAATGCGAGATCGACATCCGCACCGCGGCCGTCG
GGTTCGGCGCGGTCTGGCAGGCGGTCGTATCGGATTTCGTCGAACGGCGCACGCCGGGCGGCCTGAAGCTGTCGATCAAC
GACGGCGGCGCGCGGCCCGACATGGTGTCGCTGCGGCTCGCGCAGGCCGTGCGCGCGATCGAGGGGGACGCATGA

Upstream 100 bases:

>100_bases
CGCCGCTGGCTCGCCGCGCGGTCGATCAAGGATCTGGTGCACTGGTCGGGCGGGCTCTATGCGCCGCCGGCCCGGTTCCG
CAACTGGTGAGGAAGAGGGC

Downstream 100 bases:

>100_bases
TGAGCGATATTCGTCATATCCATGACGCCCCCGCGTTCGTCGCGAACGCGGCGAGCTGGTACGAAGCGTCGGCGCGGCAA
CGCATCGACGGGCTGCTCGA

Product: malonate decarboxylase subunit delta

Products: NA

Alternate protein names: Malonate decarboxylase subunit delta [H]

Number of amino acids: Translated: 104; Mature: 104

Protein sequence:

>104_residues
MEQLNYRFTARERAKGEQAAALVGVVASGNLEVLVERVLPGNECEIDIRTAAVGFGAVWQAVVSDFVERRTPGGLKLSIN
DGGARPDMVSLRLAQAVRAIEGDA

Sequences:

>Translated_104_residues
MEQLNYRFTARERAKGEQAAALVGVVASGNLEVLVERVLPGNECEIDIRTAAVGFGAVWQAVVSDFVERRTPGGLKLSIN
DGGARPDMVSLRLAQAVRAIEGDA
>Mature_104_residues
MEQLNYRFTARERAKGEQAAALVGVVASGNLEVLVERVLPGNECEIDIRTAAVGFGAVWQAVVSDFVERRTPGGLKLSIN
DGGARPDMVSLRLAQAVRAIEGDA

Specific function: Subunit of malonate decarboxylase, it is an acyl carrier protein to which acetyl and malonyl thioester residues are bound via a 2'-(5''-phosphoribosyl)-3'-dephospho-CoA prosthetic group and turn over during the catalytic mechanism [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mdcC family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009662
- ProDom:   PD015450 [H]

Pfam domain/function: PF06857 MdcD [H]

EC number: NA

Molecular weight: Translated: 11096; Mature: 11096

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQLNYRFTARERAKGEQAAALVGVVASGNLEVLVERVLPGNECEIDIRTAAVGFGAVWQ
CCCCCCEECCHHHCCCHHHHHEEEEECCCCHHHHHHHHCCCCCCEEEEEHHHHHHHHHHH
AVVSDFVERRTPGGLKLSINDGGARPDMVSLRLAQAVRAIEGDA
HHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MEQLNYRFTARERAKGEQAAALVGVVASGNLEVLVERVLPGNECEIDIRTAAVGFGAVWQ
CCCCCCEECCHHHCCCHHHHHEEEEECCCCHHHHHHHHCCCCCCEEEEEHHHHHHHHHHH
AVVSDFVERRTPGGLKLSINDGGARPDMVSLRLAQAVRAIEGDA
HHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12597275 [H]