| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116689270
Identifier: 116689270
GI number: 116689270
Start: 1379331
End: 1379678
Strand: Direct
Name: 116689270
Synonym: Bcen2424_1248
Alternate gene names: NA
Gene position: 1379331-1379678 (Clockwise)
Preceding gene: 116689269
Following gene: 116689271
Centisome position: 39.59
GC content: 57.47
Gene sequence:
>348_bases TTGACCCAACTTTCATTTTTCCTACATCCGGCTCGCGGCAAAACTGCGCGGGTGTGCCGCGATTGCTCGGACGATTTCGA AAACCGATCGATACCGGGTAATCACCGATATCTCCCAAGTTGTATATACAACATCATCCGCTGGCAATGTCGGCACACGT CGTGCCGGTTGCGCGCCAGCGTGCAGACCGTGCGTGCGTGGCGCATGCCGGCGATCCACGGCGCCCCGCATCCGCAGAGC CGAAAGGGCGGCTCGCAGTTTCCTGTCCCGTTCAAACCATGTTTGGTCCTGAGTATTTTGGAGATTGACCCGTGTCAACG AATTCCAGTGGAAAAGCCGGCGGACTGA
Upstream 100 bases:
>100_bases TCCGACCGGCTCGTCTGATGCGGTGCGGGCGGTGCGCTCGCCGGGTTATTCGTCCGTGCTTCCCCTGCAGTGACGGCTGC GCCCGATCGCCCCCCTCGGG
Downstream 100 bases:
>100_bases TCGAGGTACGCTCGATCGACTTCATTCCCGACGCCGAGCGCCACGGCGGCCTGCTGAGCCAGTTCACGCTGTGGCTGTCG GCCAACATGCAGATCACGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 115; Mature: 114
Protein sequence:
>115_residues MTQLSFFLHPARGKTARVCRDCSDDFENRSIPGNHRYLPSCIYNIIRWQCRHTSCRLRASVQTVRAWRMPAIHGAPHPQS RKGGSQFPVPFKPCLVLSILEIDPCQRIPVEKPAD
Sequences:
>Translated_115_residues MTQLSFFLHPARGKTARVCRDCSDDFENRSIPGNHRYLPSCIYNIIRWQCRHTSCRLRASVQTVRAWRMPAIHGAPHPQS RKGGSQFPVPFKPCLVLSILEIDPCQRIPVEKPAD >Mature_114_residues TQLSFFLHPARGKTARVCRDCSDDFENRSIPGNHRYLPSCIYNIIRWQCRHTSCRLRASVQTVRAWRMPAIHGAPHPQSR KGGSQFPVPFKPCLVLSILEIDPCQRIPVEKPAD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13168; Mature: 13037
Theoretical pI: Translated: 9.92; Mature: 9.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.1 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 7.8 %Cys+Met (Translated Protein) 6.1 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 7.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQLSFFLHPARGKTARVCRDCSDDFENRSIPGNHRYLPSCIYNIIRWQCRHTSCRLRAS CCCCCEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHH VQTVRAWRMPAIHGAPHPQSRKGGSQFPVPFKPCLVLSILEIDPCQRIPVEKPAD HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure TQLSFFLHPARGKTARVCRDCSDDFENRSIPGNHRYLPSCIYNIIRWQCRHTSCRLRAS CCCCEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHH VQTVRAWRMPAIHGAPHPQSRKGGSQFPVPFKPCLVLSILEIDPCQRIPVEKPAD HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA