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The map label for this gene is yaeJ [C]

Identifier: 116689239

GI number: 116689239

Start: 1348249

End: 1348653

Strand: Direct

Name: yaeJ [C]

Synonym: Bcen2424_1217

Alternate gene names: 116689239

Gene position: 1348249-1348653 (Clockwise)

Preceding gene: 116689238

Following gene: 116689246

Centisome position: 38.7

GC content: 66.67

Gene sequence:

>405_bases
ATGATGATTCGCTACACGCTCGATCCGGCCGAGGTCGAATGGACGGCCGTGCGCGCGCAGGGCGCGGGCGGGCAGAACGT
GAACAAGGTGTCGAGCGCGATTCATCTGCGCTTCGACATTCGCGCGTCGTCGCTGCCGCCGGTCCTCAAGGAGCGGCTGC
TTGCGCTGTCCGACCAGCGCATCACGCGCGACGGCATCGTCGTGATCAAGTCGCAGGAATATCGGACGCAGGAGAAGAAC
CGCGAGGCCGCGCTGGCACGGCTCGATACGTTGATCGGCAGCGTCGCATACACGCCGCGTGCCCGGGTCGCGACGCGGCC
GACGCGTGCGTCGAAGGAACGGCGGCTCGAGCACAAGTCGCGCCGCAGCACGGTGAAGTCAGGACGAGGGAAGGTGATCG
ACTGA

Upstream 100 bases:

>100_bases
GCGTGCTGGCGCAGGCGGTCGCGACACGCACGCAGCGCGATTCGGGGCTCGCGGCCCGCGTCGACGAGGCGCTTGCCCGG
CGCCGCACGGAGGTTTCGCG

Downstream 100 bases:

>100_bases
CGAGCGAAGGGCCGGTGCGGGTCGCAGGCGAACGTGCGCCGTGCGCGCCGGCTACCGCATCACGGTTCCGGCGCTGTCGA
GCACGAAGTCGACGCAGAAC

Product: peptidyl-tRNA hydrolase domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 134; Mature: 134

Protein sequence:

>134_residues
MMIRYTLDPAEVEWTAVRAQGAGGQNVNKVSSAIHLRFDIRASSLPPVLKERLLALSDQRITRDGIVVIKSQEYRTQEKN
REAALARLDTLIGSVAYTPRARVATRPTRASKERRLEHKSRRSTVKSGRGKVID

Sequences:

>Translated_134_residues
MMIRYTLDPAEVEWTAVRAQGAGGQNVNKVSSAIHLRFDIRASSLPPVLKERLLALSDQRITRDGIVVIKSQEYRTQEKN
REAALARLDTLIGSVAYTPRARVATRPTRASKERRLEHKSRRSTVKSGRGKVID
>Mature_134_residues
MMIRYTLDPAEVEWTAVRAQGAGGQNVNKVSSAIHLRFDIRASSLPPVLKERLLALSDQRITRDGIVVIKSQEYRTQEKN
REAALARLDTLIGSVAYTPRARVATRPTRASKERRLEHKSRRSTVKSGRGKVID

Specific function: Unknown

COG id: COG1186

COG function: function code J; Protein chain release factor B

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the prokaryotic/mitochondrial release factor family [H]

Homologues:

Organism=Escherichia coli, GI1786389, Length=122, Percent_Identity=66.3934426229508, Blast_Score=158, Evalue=1e-40,
Organism=Drosophila melanogaster, GI19921098, Length=126, Percent_Identity=36.5079365079365, Blast_Score=62, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000352 [H]

Pfam domain/function: PF00472 RF-1 [H]

EC number: NA

Molecular weight: Translated: 15066; Mature: 15066

Theoretical pI: Translated: 11.61; Mature: 11.61

Prosite motif: PS00745 RF_PROK_I

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMIRYTLDPAEVEWTAVRAQGAGGQNVNKVSSAIHLRFDIRASSLPPVLKERLLALSDQR
CEEEEECCCCCEEEEEEEECCCCCCCHHHHHHEEEEEEECCCCCCCHHHHHHHHHHCCCC
ITRDGIVVIKSQEYRTQEKNREAALARLDTLIGSVAYTPRARVATRPTRASKERRLEHKS
CCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHH
RRSTVKSGRGKVID
HHHHHHCCCCCCCC
>Mature Secondary Structure
MMIRYTLDPAEVEWTAVRAQGAGGQNVNKVSSAIHLRFDIRASSLPPVLKERLLALSDQR
CEEEEECCCCCEEEEEEEECCCCCCCHHHHHHEEEEEEECCCCCCCHHHHHHHHHHCCCC
ITRDGIVVIKSQEYRTQEKNREAALARLDTLIGSVAYTPRARVATRPTRASKERRLEHKS
CCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHH
RRSTVKSGRGKVID
HHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1624453 [H]