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The map label for this gene is ykuU [H]

Identifier: 116689212

GI number: 116689212

Start: 1308234

End: 1308782

Strand: Direct

Name: ykuU [H]

Synonym: Bcen2424_1190

Alternate gene names: 116689212

Gene position: 1308234-1308782 (Clockwise)

Preceding gene: 116689209

Following gene: 116689214

Centisome position: 37.55

GC content: 65.94

Gene sequence:

>549_bases
ATGAAGCGAAAACTGTTGCTGGGCGCCATGGCGGCGCTGGTGGCCGGCCATGCGCTGCTGGCGCAGGCGGAACTGAGGCC
GGGCGCCGCGGCGCCCGATTTCACGACGCAGGCGTCGCTGGGCGGCAAGACTTACACGTACTCGCTCGCGGACGCACTGA
AGCAGGGGCCGGTCGTGCTGTATTTCTATCCGGCGGCGTTCACGAAGGGCTGCACGATCGAGGCGCATGCGTTCGCGGAC
GCGGTCGACCGTTACAAGGCTTACGGCGCGACGGTGATCGGCGTGTCGGCCGACAACATCGACACGCTGACGAAGTTCTC
GGTGAGCGAGTGCCGCAGCAAGTTCCCGGTGGCGGCCGACCCGGACGCGAAGATCATCCGCGAATACGACGCGAAGCTGC
CGGCGCTCGACCGGGCCAACCGCGTGTCCTATGTGATTTCGCCGGAAGGGAAGGTTCTCTACGAATACACGAGCCTGTCG
CCCGACAAGCACGTCGAGAACACGCTCGCCGCCGTGAAGGCGTGGGCCGACGCGCATCCGAAGCAGTAA

Upstream 100 bases:

>100_bases
GGCGGCGCTGCCGCGGTCCGGATCAACGAGGCAGGCGTTCGACAGGCGAACACCTGAATGGCCTGCATCGAGGCCGACTT
TATAAGAAATGAGGACGCAG

Downstream 100 bases:

>100_bases
GCGGCTGCCCCGCACGTGAAAACGGCCCGTCGTGCGGGCCGCGGGCACGGGCATGCGCCGCCCTTCCGGGAGGCGCGCGA
CGGGCCGTTACGCGCGCAAT

Product: redoxin domain-containing protein

Products: Acceptor; H2O; oxidized thioredoxin [C]

Alternate protein names: NA

Number of amino acids: Translated: 182; Mature: 182

Protein sequence:

>182_residues
MKRKLLLGAMAALVAGHALLAQAELRPGAAAPDFTTQASLGGKTYTYSLADALKQGPVVLYFYPAAFTKGCTIEAHAFAD
AVDRYKAYGATVIGVSADNIDTLTKFSVSECRSKFPVAADPDAKIIREYDAKLPALDRANRVSYVISPEGKVLYEYTSLS
PDKHVENTLAAVKAWADAHPKQ

Sequences:

>Translated_182_residues
MKRKLLLGAMAALVAGHALLAQAELRPGAAAPDFTTQASLGGKTYTYSLADALKQGPVVLYFYPAAFTKGCTIEAHAFAD
AVDRYKAYGATVIGVSADNIDTLTKFSVSECRSKFPVAADPDAKIIREYDAKLPALDRANRVSYVISPEGKVLYEYTSLS
PDKHVENTLAAVKAWADAHPKQ
>Mature_182_residues
MKRKLLLGAMAALVAGHALLAQAELRPGAAAPDFTTQASLGGKTYTYSLADALKQGPVVLYFYPAAFTKGCTIEAHAFAD
AVDRYKAYGATVIGVSADNIDTLTKFSVSECRSKFPVAADPDAKIIREYDAKLPALDRANRVSYVISPEGKVLYEYTSLS
PDKHVENTLAAVKAWADAHPKQ

Specific function: Unknown

COG id: COG1225

COG function: function code O; Peroxiredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 thioredoxin domain [H]

Homologues:

Organism=Escherichia coli, GI1788825, Length=158, Percent_Identity=27.8481012658228, Blast_Score=69, Evalue=2e-13,

Paralogues:

None

Copy number: 920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000866
- InterPro:   IPR019479
- InterPro:   IPR017936
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF10417 1-cysPrx_C; PF00578 AhpC-TSA [H]

EC number: NA

Molecular weight: Translated: 19525; Mature: 19525

Theoretical pI: Translated: 8.61; Mature: 8.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRKLLLGAMAALVAGHALLAQAELRPGAAAPDFTTQASLGGKTYTYSLADALKQGPVVL
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCCCEEEEHHHHHHHHCCEEE
YFYPAAFTKGCTIEAHAFADAVDRYKAYGATVIGVSADNIDTLTKFSVSECRSKFPVAAD
EEECCCCCCCCEEEHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCC
PDAKIIREYDAKLPALDRANRVSYVISPEGKVLYEYTSLSPDKHVENTLAAVKAWADAHP
CCHHHHHHHHCCCCCCCCCCCEEEEECCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCC
KQ
CC
>Mature Secondary Structure
MKRKLLLGAMAALVAGHALLAQAELRPGAAAPDFTTQASLGGKTYTYSLADALKQGPVVL
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCCCEEEEHHHHHHHHCCEEE
YFYPAAFTKGCTIEAHAFADAVDRYKAYGATVIGVSADNIDTLTKFSVSECRSKFPVAAD
EEECCCCCCCCEEEHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCC
PDAKIIREYDAKLPALDRANRVSYVISPEGKVLYEYTSLSPDKHVENTLAAVKAWADAHP
CCHHHHHHHHCCCCCCCCCCCEEEEECCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCC
KQ
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: reduced acceptor; H2O2; reduced thioredoxin [C]

Specific reaction: reduced acceptor + H2O2 = Acceptor + H2O reduced thioredoxin + H2O2 = oxidized thioredoxin + H2O [C]

General reaction: Oxidoreductases; Acting on a peroxide as acceptor; Peroxidase [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]