Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

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The map label for this gene is 116689176

Identifier: 116689176

GI number: 116689176

Start: 1264839

End: 1265708

Strand: Reverse

Name: 116689176

Synonym: Bcen2424_1154

Alternate gene names: NA

Gene position: 1265708-1264839 (Counterclockwise)

Preceding gene: 116689177

Following gene: 116689173

Centisome position: 36.33

GC content: 68.16

Gene sequence:

>870_bases
ATGAATCTCCTGTACTGGCTCGATCCGTGGGAGCCGTCGCCGACCGTGGTCGTCGCGGTGCTGACGGCCGCCGTGCTGTT
CGCACGCGGCGTGAAGAAGGCGAAGGTGTCGCCGCTGCGGCAGTTCTCGTTCTGGTTCGGGCTGACGGCGCTCTACATCG
CGCTGCATACGCGGCTCGACTATTTCTTCGAGCACGAATTCTTCATGCACCGCGCGCAGCACCTCGTGCTGCATCACCTC
GGGCCGTTCTTCATCGCACTGTCCTATCCGGGCGCGGCGATCCGCGCGGGCATTCCGTTCAGCTGGCGGCAGCGCTTCGT
GCGCCCCGCGCTCGCGTGGGCGCCGGTGCGCGCGACCCTCGACGTGGTATTTCATCCGGTCGTCGCGGTCGTGCTGTTCG
TCGGGCTGATCTATTTCTGGCTGCTGTCGCCGATCCACTTCATCGCGATGCTCGACTGGCGTCTCTATCGCGTGATGAAC
TGGAGCATGGTGATCGACGGGCTGCTGTTCTGGTGGCTCGTCGTCGATCCGCGTCCCGCGCCGCCCGCGCGGCTGTCGCC
GGGCCGCCGGATTCTGATCGTCGTCGCGGCGATCCCGCCGCAGATCGCGCTCGGCGCGCTGATCTTCTTCACGCCGCACG
AGCTGTATCCGATCTACTCGATCTGCGGCCGCGCGTTCACGTGGCTGAGCCCGCTGCGCGACCAGCAGATCGGCGGCCTG
CTGCTGTGGATTCCCGGCTCGATGATGAGCGTGATCGGCGCGCTGATCGCGCTGCGGCACTGGCTGCGGTTGTCCGCCCG
CGGGCGCCTGATCGGCGAGCGGGCCGCGCAGCGCACGGACGAGCCGCCCGTCGCACGCGCCGCGCACTGA

Upstream 100 bases:

>100_bases
GGCGACACCGTGCACCTGCGCCTGAAATTCTCCGACGGCGAGACGGTCGATGCGCCATTCGCCGTGAAATCGCCGGCCCA
GGCGAAGTGATGCGCGCGCG

Downstream 100 bases:

>100_bases
TTGCCGCGCGGCGCGGCGCGCATCACGCGCGCGCGCTGCTCATCCATACGTGCGGGATGCCATCCTCGTCGTGCACGTCC
GAACTCGGCGTGAAGCCGAA

Product: membrane protein

Products: NA

Alternate protein names: Cytochrome C Oxidase Caa3 Assembly Factor Family Protein

Number of amino acids: Translated: 289; Mature: 289

Protein sequence:

>289_residues
MNLLYWLDPWEPSPTVVVAVLTAAVLFARGVKKAKVSPLRQFSFWFGLTALYIALHTRLDYFFEHEFFMHRAQHLVLHHL
GPFFIALSYPGAAIRAGIPFSWRQRFVRPALAWAPVRATLDVVFHPVVAVVLFVGLIYFWLLSPIHFIAMLDWRLYRVMN
WSMVIDGLLFWWLVVDPRPAPPARLSPGRRILIVVAAIPPQIALGALIFFTPHELYPIYSICGRAFTWLSPLRDQQIGGL
LLWIPGSMMSVIGALIALRHWLRLSARGRLIGERAAQRTDEPPVARAAH

Sequences:

>Translated_289_residues
MNLLYWLDPWEPSPTVVVAVLTAAVLFARGVKKAKVSPLRQFSFWFGLTALYIALHTRLDYFFEHEFFMHRAQHLVLHHL
GPFFIALSYPGAAIRAGIPFSWRQRFVRPALAWAPVRATLDVVFHPVVAVVLFVGLIYFWLLSPIHFIAMLDWRLYRVMN
WSMVIDGLLFWWLVVDPRPAPPARLSPGRRILIVVAAIPPQIALGALIFFTPHELYPIYSICGRAFTWLSPLRDQQIGGL
LLWIPGSMMSVIGALIALRHWLRLSARGRLIGERAAQRTDEPPVARAAH
>Mature_289_residues
MNLLYWLDPWEPSPTVVVAVLTAAVLFARGVKKAKVSPLRQFSFWFGLTALYIALHTRLDYFFEHEFFMHRAQHLVLHHL
GPFFIALSYPGAAIRAGIPFSWRQRFVRPALAWAPVRATLDVVFHPVVAVVLFVGLIYFWLLSPIHFIAMLDWRLYRVMN
WSMVIDGLLFWWLVVDPRPAPPARLSPGRRILIVVAAIPPQIALGALIFFTPHELYPIYSICGRAFTWLSPLRDQQIGGL
LLWIPGSMMSVIGALIALRHWLRLSARGRLIGERAAQRTDEPPVARAAH

Specific function: Unknown

COG id: COG3336

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32970; Mature: 32970

Theoretical pI: Translated: 11.26; Mature: 11.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLLYWLDPWEPSPTVVVAVLTAAVLFARGVKKAKVSPLRQFSFWFGLTALYIALHTRLD
CCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YFFEHEFFMHRAQHLVLHHLGPFFIALSYPGAAIRAGIPFSWRQRFVRPALAWAPVRATL
HHHHHHHHHHHHHHHHHHHCCHHEEEEECCCHHEECCCCHHHHHHHHHHHHHHHHHHHHH
DVVFHPVVAVVLFVGLIYFWLLSPIHFIAMLDWRLYRVMNWSMVIDGLLFWWLVVDPRPA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCC
PPARLSPGRRILIVVAAIPPQIALGALIFFTPHELYPIYSICGRAFTWLSPLRDQQIGGL
CCCCCCCCCEEEEEEECCCCHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCE
LLWIPGSMMSVIGALIALRHWLRLSARGRLIGERAAQRTDEPPVARAAH
EEEECCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MNLLYWLDPWEPSPTVVVAVLTAAVLFARGVKKAKVSPLRQFSFWFGLTALYIALHTRLD
CCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YFFEHEFFMHRAQHLVLHHLGPFFIALSYPGAAIRAGIPFSWRQRFVRPALAWAPVRATL
HHHHHHHHHHHHHHHHHHHCCHHEEEEECCCHHEECCCCHHHHHHHHHHHHHHHHHHHHH
DVVFHPVVAVVLFVGLIYFWLLSPIHFIAMLDWRLYRVMNWSMVIDGLLFWWLVVDPRPA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCC
PPARLSPGRRILIVVAAIPPQIALGALIFFTPHELYPIYSICGRAFTWLSPLRDQQIGGL
CCCCCCCCCEEEEEEECCCCHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCE
LLWIPGSMMSVIGALIALRHWLRLSARGRLIGERAAQRTDEPPVARAAH
EEEECCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA