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The map label for this gene is recO

Identifier: 116689158

GI number: 116689158

Start: 1246805

End: 1247641

Strand: Direct

Name: recO

Synonym: Bcen2424_1136

Alternate gene names: 116689158

Gene position: 1246805-1247641 (Clockwise)

Preceding gene: 116689157

Following gene: 116689159

Centisome position: 35.79

GC content: 68.22

Gene sequence:

>837_bases
ATGGGTACGAATGACGCGCTGACGTCGACCGAAGACGCGGTGACGGCCGGCGCGAACGACGCGCCGCTGCCGGCACCGCC
CGAACCGCCGCGCAAGGCGCGGCGCGCGACGTCTCGCACGTCCGATTTCCGCGTCGCCGAGCAGCCGGCGTTCGTGCTGC
ACAGCTATCCGTATCGGGAAACGAGCCTGATCGTCGACGTGCTGACGCGCGACCACGGCCGGCTCGCACTCGTCGCGAAG
GGCGCGAAGCGCCCGCACTCCGCGTTGCGCGGCGTATTGCAGACGTTCCAGCCGCTGCTGCTGTCCTGGTCCGGCAAATC
CGAGGTGCGCACGCTGACGGGCGCCGAGTGGGTCGGCGGGATGCTGCCGCTCGGCGGCGACGGGCTGTTGTGCGGTTTCT
ATGCGAACGAGCTGCTCGTGAAGTTCTGCGCGCGCGAGGATCCCCAGCCGCCGCTGTTCAATCATTACGTGCTGACCCTC
ACGCGCCTCGCGCACGGCGAGCCCGCGGTGCAGGTGCTGCGCTCGTTCGAGCGCGTGCTGCTGCGCGAGACTGGCTATGC
GATGGCGCTGAACCGCACGGTTGCCCGCCGCGCGGTCGAACCCGAGCGCCGCTACGTGTTCGATCCCGAGCGCGGCGTGC
GCAATGCGGACGACGACGTGCCGTCGCACTGGCCGGTCATCACCGGGCAGACGTTGCTCGACATGGAACAGGACGATTAC
CATCGAGCCCAGACGGTTGCGCAAAGCAAGACGCTGATGCGCTTCCTGCTGAACACCTATCTCGGCGGCACGCCGCTCGC
CACGCGTCAGATCCTGATCGACCTGCAAAACCTATGA

Upstream 100 bases:

>100_bases
CGGATGGACATGGAAAAGCTGTTCGACGGCCCCGTGTACCTCGAGACCTTCGTGAAGGTGAAGAGCGGCTGGGCCGACAA
CGAGGCGGGGCTGCGTGCCT

Downstream 100 bases:

>100_bases
GCTTCTTCCTGACAACGCCCACCGCCATCGACCTCGGCGTGAACATCGACCACGTCGCGACGCTGCGCAATGCGCGCGGC
ACGCGCTATCCCGATCCGAT

Product: DNA repair protein RecO

Products: NA

Alternate protein names: Recombination protein O

Number of amino acids: Translated: 278; Mature: 277

Protein sequence:

>278_residues
MGTNDALTSTEDAVTAGANDAPLPAPPEPPRKARRATSRTSDFRVAEQPAFVLHSYPYRETSLIVDVLTRDHGRLALVAK
GAKRPHSALRGVLQTFQPLLLSWSGKSEVRTLTGAEWVGGMLPLGGDGLLCGFYANELLVKFCAREDPQPPLFNHYVLTL
TRLAHGEPAVQVLRSFERVLLRETGYAMALNRTVARRAVEPERRYVFDPERGVRNADDDVPSHWPVITGQTLLDMEQDDY
HRAQTVAQSKTLMRFLLNTYLGGTPLATRQILIDLQNL

Sequences:

>Translated_278_residues
MGTNDALTSTEDAVTAGANDAPLPAPPEPPRKARRATSRTSDFRVAEQPAFVLHSYPYRETSLIVDVLTRDHGRLALVAK
GAKRPHSALRGVLQTFQPLLLSWSGKSEVRTLTGAEWVGGMLPLGGDGLLCGFYANELLVKFCAREDPQPPLFNHYVLTL
TRLAHGEPAVQVLRSFERVLLRETGYAMALNRTVARRAVEPERRYVFDPERGVRNADDDVPSHWPVITGQTLLDMEQDDY
HRAQTVAQSKTLMRFLLNTYLGGTPLATRQILIDLQNL
>Mature_277_residues
GTNDALTSTEDAVTAGANDAPLPAPPEPPRKARRATSRTSDFRVAEQPAFVLHSYPYRETSLIVDVLTRDHGRLALVAKG
AKRPHSALRGVLQTFQPLLLSWSGKSEVRTLTGAEWVGGMLPLGGDGLLCGFYANELLVKFCAREDPQPPLFNHYVLTLT
RLAHGEPAVQVLRSFERVLLRETGYAMALNRTVARRAVEPERRYVFDPERGVRNADDDVPSHWPVITGQTLLDMEQDDYH
RAQTVAQSKTLMRFLLNTYLGGTPLATRQILIDLQNL

Specific function: Involved in DNA repair and recF pathway recombination

COG id: COG1381

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recO family

Homologues:

Organism=Escherichia coli, GI2367140, Length=230, Percent_Identity=38.695652173913, Blast_Score=128, Evalue=5e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RECO_BURCA (Q1BXT9)

Other databases:

- EMBL:   CP000378
- RefSeq:   YP_620539.1
- ProteinModelPortal:   Q1BXT9
- STRING:   Q1BXT9
- GeneID:   4092183
- GenomeReviews:   CP000378_GR
- KEGG:   bcn:Bcen_0656
- eggNOG:   COG1381
- HOGENOM:   HBG645116
- OMA:   SILQPFQ
- ProtClustDB:   PRK00085
- BioCyc:   BCEN331271:BCEN_0656-MONOMER
- HAMAP:   MF_00201
- InterPro:   IPR001164
- InterPro:   IPR022572
- InterPro:   IPR016027
- InterPro:   IPR003717
- TIGRFAMs:   TIGR00613

Pfam domain/function: PF02565 RecO; PF11967 RecO_N; SSF57863 ArfGAP; SSF50249 Nucleic_acid_OB

EC number: NA

Molecular weight: Translated: 30896; Mature: 30764

Theoretical pI: Translated: 8.23; Mature: 8.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGTNDALTSTEDAVTAGANDAPLPAPPEPPRKARRATSRTSDFRVAEQPAFVLHSYPYRE
CCCCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCEECCCCCCEEECCCCCH
TSLIVDVLTRDHGRLALVAKGAKRPHSALRGVLQTFQPLLLSWSGKSEVRTLTGAEWVGG
HHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCHHHHCC
MLPLGGDGLLCGFYANELLVKFCAREDPQPPLFNHYVLTLTRLAHGEPAVQVLRSFERVL
CCCCCCCCEEHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHH
LRETGYAMALNRTVARRAVEPERRYVFDPERGVRNADDDVPSHWPVITGQTLLDMEQDDY
HHHCCCHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCEECCCHHCCCCCHHH
HRAQTVAQSKTLMRFLLNTYLGGTPLATRQILIDLQNL
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHEECCC
>Mature Secondary Structure 
GTNDALTSTEDAVTAGANDAPLPAPPEPPRKARRATSRTSDFRVAEQPAFVLHSYPYRE
CCCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCEECCCCCCEEECCCCCH
TSLIVDVLTRDHGRLALVAKGAKRPHSALRGVLQTFQPLLLSWSGKSEVRTLTGAEWVGG
HHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCHHHHCC
MLPLGGDGLLCGFYANELLVKFCAREDPQPPLFNHYVLTLTRLAHGEPAVQVLRSFERVL
CCCCCCCCEEHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHH
LRETGYAMALNRTVARRAVEPERRYVFDPERGVRNADDDVPSHWPVITGQTLLDMEQDDY
HHHCCCHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCEECCCHHCCCCCHHH
HRAQTVAQSKTLMRFLLNTYLGGTPLATRQILIDLQNL
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA