Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

Click here to switch to the map view.

The map label for this gene is 116689128

Identifier: 116689128

GI number: 116689128

Start: 1217431

End: 1217916

Strand: Reverse

Name: 116689128

Synonym: Bcen2424_1105

Alternate gene names: NA

Gene position: 1217916-1217431 (Counterclockwise)

Preceding gene: 116689129

Following gene: 116689122

Centisome position: 34.96

GC content: 68.93

Gene sequence:

>486_bases
GTGAGCGGCACGCCGCTGATCCGCGCGGCCGACCCGCGCGACGTCGGCGCGATCCTCGCGCTGATGCGCGAGCTGGCCGA
GTTCGAGAAGCTCACGCATCTGTTCGTCGCAACCGAAGCCGATCTCGCCGACGCGCTGTTCGGCGAGCACCCGGCTGCCG
AAGCGCTGGTGGCCGAGCGCGACGGCGCGATCGTCGCGTACGCGCTGTTCTTCCACAACTATTCGACGTTCCTCGGCCGC
CGCGGGCTCTATCTCGAGGATCTGTACGTGCAGCCGTCGCAGCGCGGCACGGGCCTCGGCACCGCGATGCTGCGTCATCT
CGCGGCACTCGCCGTCGAGCGCCGTTGCGCGCGCTTCGAATGGTCGGTCCTCGACTGGAACCAGCCGGCAATCGATTTCT
ACGAGAAGATGGGCGCGACCGTGCTGCCGGAGTGGCGCATCGTACGCGTGACGGGCGACGCGCTGGACACGCTCGCCGCA
CATTGA

Upstream 100 bases:

>100_bases
TCGGTTTCGTGCTGCTGTGGATCGCGTGCCATGCGTACAACTGGGTCGCATCGCGCTTCGGCGGCATCGAGATCGTGCTG
TCCGATCCGCCGGAGGAAGC

Downstream 100 bases:

>100_bases
ACGCGAGCCGGCCGCGCCGGCGATCGCCGCACAAGAAAACGGGCGCCGCGGCGCCCGTTTTTTCCGTCCGGCAGCGGCCG
GCAACGCGCATCACGCGTCG

Product: GCN5-related N-acetyltransferase

Products: NA

Alternate protein names: Acetyltransferase; N-Acetyltransferase; Acetyltransferase GNAT Family; GNAT Family Acetyltransferase; Diamine N-Acetyltransferase; GCN5-Like N-Acetyltransferase; Acetyltransferase Protein; Acetyltransferase Family Protein; Diamine Acetyltransferase; Histone Acetyltransferase HPA2-Like Acetyltransferase; Acetyltransferase GNAT Family Protein; Histone Acetyltransferase HPA; ACETYLTRANSFERASE GCN5-Related N-Acetyltransferase; Gcn5-Related N-Acetyltransferase; Gnat Acetyltransferase; N-Acetyltransferase Protein; GNAT-Family Acetyltransferase; LOW QUALITY PROTEIN Acetyltransferase; Sortase-Like Acyltransferase; Argininosuccinate Synthase; Spermidine/Spermine N1-Acetyl Transferase

Number of amino acids: Translated: 161; Mature: 160

Protein sequence:

>161_residues
MSGTPLIRAADPRDVGAILALMRELAEFEKLTHLFVATEADLADALFGEHPAAEALVAERDGAIVAYALFFHNYSTFLGR
RGLYLEDLYVQPSQRGTGLGTAMLRHLAALAVERRCARFEWSVLDWNQPAIDFYEKMGATVLPEWRIVRVTGDALDTLAA
H

Sequences:

>Translated_161_residues
MSGTPLIRAADPRDVGAILALMRELAEFEKLTHLFVATEADLADALFGEHPAAEALVAERDGAIVAYALFFHNYSTFLGR
RGLYLEDLYVQPSQRGTGLGTAMLRHLAALAVERRCARFEWSVLDWNQPAIDFYEKMGATVLPEWRIVRVTGDALDTLAA
H
>Mature_160_residues
SGTPLIRAADPRDVGAILALMRELAEFEKLTHLFVATEADLADALFGEHPAAEALVAERDGAIVAYALFFHNYSTFLGRR
GLYLEDLYVQPSQRGTGLGTAMLRHLAALAVERRCARFEWSVLDWNQPAIDFYEKMGATVLPEWRIVRVTGDALDTLAAH

Specific function: Unknown

COG id: COG0454

COG function: function code KR; Histone acetyltransferase HPA2 and related acetyltransferases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI19424126, Length=166, Percent_Identity=39.7590361445783, Blast_Score=116, Evalue=8e-27,
Organism=Homo sapiens, GI4506789, Length=166, Percent_Identity=34.9397590361446, Blast_Score=110, Evalue=6e-25,
Organism=Caenorhabditis elegans, GI17559148, Length=156, Percent_Identity=32.6923076923077, Blast_Score=83, Evalue=5e-17,
Organism=Drosophila melanogaster, GI24647013, Length=166, Percent_Identity=37.9518072289157, Blast_Score=93, Evalue=6e-20,
Organism=Drosophila melanogaster, GI24647015, Length=115, Percent_Identity=37.3913043478261, Blast_Score=73, Evalue=7e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17847; Mature: 17715

Theoretical pI: Translated: 4.99; Mature: 4.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGTPLIRAADPRDVGAILALMRELAEFEKLTHLFVATEADLADALFGEHPAAEALVAER
CCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHCC
DGAIVAYALFFHNYSTFLGRRGLYLEDLYVQPSQRGTGLGTAMLRHLAALAVERRCARFE
CCCEEEHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCE
WSVLDWNQPAIDFYEKMGATVLPEWRIVRVTGDALDTLAAH
EEEECCCCHHHHHHHHCCCEECCCCEEEEEECHHHHHHHCC
>Mature Secondary Structure 
SGTPLIRAADPRDVGAILALMRELAEFEKLTHLFVATEADLADALFGEHPAAEALVAER
CCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHCC
DGAIVAYALFFHNYSTFLGRRGLYLEDLYVQPSQRGTGLGTAMLRHLAALAVERRCARFE
CCCEEEHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCE
WSVLDWNQPAIDFYEKMGATVLPEWRIVRVTGDALDTLAAH
EEEECCCCHHHHHHHHCCCEECCCCEEEEEECHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA