| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116689128
Identifier: 116689128
GI number: 116689128
Start: 1217431
End: 1217916
Strand: Reverse
Name: 116689128
Synonym: Bcen2424_1105
Alternate gene names: NA
Gene position: 1217916-1217431 (Counterclockwise)
Preceding gene: 116689129
Following gene: 116689122
Centisome position: 34.96
GC content: 68.93
Gene sequence:
>486_bases GTGAGCGGCACGCCGCTGATCCGCGCGGCCGACCCGCGCGACGTCGGCGCGATCCTCGCGCTGATGCGCGAGCTGGCCGA GTTCGAGAAGCTCACGCATCTGTTCGTCGCAACCGAAGCCGATCTCGCCGACGCGCTGTTCGGCGAGCACCCGGCTGCCG AAGCGCTGGTGGCCGAGCGCGACGGCGCGATCGTCGCGTACGCGCTGTTCTTCCACAACTATTCGACGTTCCTCGGCCGC CGCGGGCTCTATCTCGAGGATCTGTACGTGCAGCCGTCGCAGCGCGGCACGGGCCTCGGCACCGCGATGCTGCGTCATCT CGCGGCACTCGCCGTCGAGCGCCGTTGCGCGCGCTTCGAATGGTCGGTCCTCGACTGGAACCAGCCGGCAATCGATTTCT ACGAGAAGATGGGCGCGACCGTGCTGCCGGAGTGGCGCATCGTACGCGTGACGGGCGACGCGCTGGACACGCTCGCCGCA CATTGA
Upstream 100 bases:
>100_bases TCGGTTTCGTGCTGCTGTGGATCGCGTGCCATGCGTACAACTGGGTCGCATCGCGCTTCGGCGGCATCGAGATCGTGCTG TCCGATCCGCCGGAGGAAGC
Downstream 100 bases:
>100_bases ACGCGAGCCGGCCGCGCCGGCGATCGCCGCACAAGAAAACGGGCGCCGCGGCGCCCGTTTTTTCCGTCCGGCAGCGGCCG GCAACGCGCATCACGCGTCG
Product: GCN5-related N-acetyltransferase
Products: NA
Alternate protein names: Acetyltransferase; N-Acetyltransferase; Acetyltransferase GNAT Family; GNAT Family Acetyltransferase; Diamine N-Acetyltransferase; GCN5-Like N-Acetyltransferase; Acetyltransferase Protein; Acetyltransferase Family Protein; Diamine Acetyltransferase; Histone Acetyltransferase HPA2-Like Acetyltransferase; Acetyltransferase GNAT Family Protein; Histone Acetyltransferase HPA; ACETYLTRANSFERASE GCN5-Related N-Acetyltransferase; Gcn5-Related N-Acetyltransferase; Gnat Acetyltransferase; N-Acetyltransferase Protein; GNAT-Family Acetyltransferase; LOW QUALITY PROTEIN Acetyltransferase; Sortase-Like Acyltransferase; Argininosuccinate Synthase; Spermidine/Spermine N1-Acetyl Transferase
Number of amino acids: Translated: 161; Mature: 160
Protein sequence:
>161_residues MSGTPLIRAADPRDVGAILALMRELAEFEKLTHLFVATEADLADALFGEHPAAEALVAERDGAIVAYALFFHNYSTFLGR RGLYLEDLYVQPSQRGTGLGTAMLRHLAALAVERRCARFEWSVLDWNQPAIDFYEKMGATVLPEWRIVRVTGDALDTLAA H
Sequences:
>Translated_161_residues MSGTPLIRAADPRDVGAILALMRELAEFEKLTHLFVATEADLADALFGEHPAAEALVAERDGAIVAYALFFHNYSTFLGR RGLYLEDLYVQPSQRGTGLGTAMLRHLAALAVERRCARFEWSVLDWNQPAIDFYEKMGATVLPEWRIVRVTGDALDTLAA H >Mature_160_residues SGTPLIRAADPRDVGAILALMRELAEFEKLTHLFVATEADLADALFGEHPAAEALVAERDGAIVAYALFFHNYSTFLGRR GLYLEDLYVQPSQRGTGLGTAMLRHLAALAVERRCARFEWSVLDWNQPAIDFYEKMGATVLPEWRIVRVTGDALDTLAAH
Specific function: Unknown
COG id: COG0454
COG function: function code KR; Histone acetyltransferase HPA2 and related acetyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI19424126, Length=166, Percent_Identity=39.7590361445783, Blast_Score=116, Evalue=8e-27, Organism=Homo sapiens, GI4506789, Length=166, Percent_Identity=34.9397590361446, Blast_Score=110, Evalue=6e-25, Organism=Caenorhabditis elegans, GI17559148, Length=156, Percent_Identity=32.6923076923077, Blast_Score=83, Evalue=5e-17, Organism=Drosophila melanogaster, GI24647013, Length=166, Percent_Identity=37.9518072289157, Blast_Score=93, Evalue=6e-20, Organism=Drosophila melanogaster, GI24647015, Length=115, Percent_Identity=37.3913043478261, Blast_Score=73, Evalue=7e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17847; Mature: 17715
Theoretical pI: Translated: 4.99; Mature: 4.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGTPLIRAADPRDVGAILALMRELAEFEKLTHLFVATEADLADALFGEHPAAEALVAER CCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHCC DGAIVAYALFFHNYSTFLGRRGLYLEDLYVQPSQRGTGLGTAMLRHLAALAVERRCARFE CCCEEEHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCE WSVLDWNQPAIDFYEKMGATVLPEWRIVRVTGDALDTLAAH EEEECCCCHHHHHHHHCCCEECCCCEEEEEECHHHHHHHCC >Mature Secondary Structure SGTPLIRAADPRDVGAILALMRELAEFEKLTHLFVATEADLADALFGEHPAAEALVAER CCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHCC DGAIVAYALFFHNYSTFLGRRGLYLEDLYVQPSQRGTGLGTAMLRHLAALAVERRCARFE CCCEEEHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCE WSVLDWNQPAIDFYEKMGATVLPEWRIVRVTGDALDTLAAH EEEECCCCHHHHHHHHCCCEECCCCEEEEEECHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA