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The map label for this gene is nudL [H]

Identifier: 116689096

GI number: 116689096

Start: 1185998

End: 1186684

Strand: Direct

Name: nudL [H]

Synonym: Bcen2424_1073

Alternate gene names: 116689096

Gene position: 1185998-1186684 (Clockwise)

Preceding gene: 116689095

Following gene: 116689097

Centisome position: 34.04

GC content: 65.79

Gene sequence:

>687_bases
TTGAATCGCCGCCCCATCATCGATCCCGAAGTCTTGCCGGTCGAAGGCACCGGTGCCGGCCTGCCTGTCATCGATTCCCG
GTTGCTGACGCCGTCCGGCCTGCGCGAACGTTTCGCGCGTACGCTCGAATGGAGCGTCGAGCCCGGCGAGGCGAGGCTGC
AGGAGGGCGTCGATCCGCGTAGCGCGGCCGTTCTCGTGCCGCTCGTCGTCCGCGAGTCGGGCCTCACCGTGCTGCTGACG
CAGCGCGCCGATCACCTGAACGACCACGCCGGGCAAATCAGTTTTCCCGGCGGCCGTCGCGAGCCGTTCGACCGCGATGC
GACAGCCACCGCACTGCGCGAGGCGAAGGAAGAGATCGGACTGGACGCCGAACGCGTCGAGATTCTCGGTGTGCTGCCCG
ACTACCTGACCGGCACGGGTTTCTGCGTGACGCCGGTCGTCGGCCTCGTGCATCCGCCGTTCACCGTACAGGCCGACACC
TTCGAAGTCGCCGAGATTTTCGAAGTGCCGCTCGCGTTCGTGATGAATCCCGCGAACCATCAGGTCCGCGTGTTCCGGTG
GGAAGGCGGCGAGCGTCGTTTTTTTGCCATGCCCTATCCGAACGGCGAGCCGGACGGGCATTACTTCATCTGGGGCGCAA
CTGCCGCCATGTTTCGCAATCTGTATCGCTTCTTGGCCGCCGGCTAG

Upstream 100 bases:

>100_bases
TTCCCAAGAGTAAGAGCTGTAAGGAAAAAGCACCCAGCCGGGTGCTTTTTTCATTCTGGCGCGACAATATGCTCGATACG
ACACGAACCCGAGAGCCCCA

Downstream 100 bases:

>100_bases
GCGGGCGTGCCGGCTGGCGCGTGCGAGCTGCCGTCGGGCCACCGCACCGGCAGCCATGCGCGGCTGACGCTGTGCTATCG
TTATGCAAAAAATGACATAA

Product: NUDIX hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 228; Mature: 228

Protein sequence:

>228_residues
MNRRPIIDPEVLPVEGTGAGLPVIDSRLLTPSGLRERFARTLEWSVEPGEARLQEGVDPRSAAVLVPLVVRESGLTVLLT
QRADHLNDHAGQISFPGGRREPFDRDATATALREAKEEIGLDAERVEILGVLPDYLTGTGFCVTPVVGLVHPPFTVQADT
FEVAEIFEVPLAFVMNPANHQVRVFRWEGGERRFFAMPYPNGEPDGHYFIWGATAAMFRNLYRFLAAG

Sequences:

>Translated_228_residues
MNRRPIIDPEVLPVEGTGAGLPVIDSRLLTPSGLRERFARTLEWSVEPGEARLQEGVDPRSAAVLVPLVVRESGLTVLLT
QRADHLNDHAGQISFPGGRREPFDRDATATALREAKEEIGLDAERVEILGVLPDYLTGTGFCVTPVVGLVHPPFTVQADT
FEVAEIFEVPLAFVMNPANHQVRVFRWEGGERRFFAMPYPNGEPDGHYFIWGATAAMFRNLYRFLAAG
>Mature_228_residues
MNRRPIIDPEVLPVEGTGAGLPVIDSRLLTPSGLRERFARTLEWSVEPGEARLQEGVDPRSAAVLVPLVVRESGLTVLLT
QRADHLNDHAGQISFPGGRREPFDRDATATALREAKEEIGLDAERVEILGVLPDYLTGTGFCVTPVVGLVHPPFTVQADT
FEVAEIFEVPLAFVMNPANHQVRVFRWEGGERRFFAMPYPNGEPDGHYFIWGATAAMFRNLYRFLAAG

Specific function: Probably mediates the hydrolysis of some nucleoside diphosphate derivatives [H]

COG id: COG0494

COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

Organism=Homo sapiens, GI157785656, Length=155, Percent_Identity=39.3548387096774, Blast_Score=106, Evalue=2e-23,
Organism=Escherichia coli, GI1788115, Length=170, Percent_Identity=42.3529411764706, Blast_Score=97, Evalue=7e-22,
Organism=Caenorhabditis elegans, GI17536993, Length=120, Percent_Identity=40, Blast_Score=79, Evalue=2e-15,
Organism=Drosophila melanogaster, GI18859683, Length=166, Percent_Identity=35.5421686746988, Blast_Score=81, Evalue=5e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000086
- InterPro:   IPR015797
- InterPro:   IPR000059 [H]

Pfam domain/function: PF00293 NUDIX [H]

EC number: NA

Molecular weight: Translated: 25205; Mature: 25205

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRRPIIDPEVLPVEGTGAGLPVIDSRLLTPSGLRERFARTLEWSVEPGEARLQEGVDPR
CCCCCCCCCCEEEECCCCCCCCHHCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHCCCCCC
SAAVLVPLVVRESGLTVLLTQRADHLNDHAGQISFPGGRREPFDRDATATALREAKEEIG
HHEEEEEEEECCCCCEEEEECCCHHCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHC
LDAERVEILGVLPDYLTGTGFCVTPVVGLVHPPFTVQADTFEVAEIFEVPLAFVMNPANH
CCHHHHHEEECCHHHHCCCCHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHEECCCCC
QVRVFRWEGGERRFFAMPYPNGEPDGHYFIWGATAAMFRNLYRFLAAG
EEEEEEEECCCEEEEECCCCCCCCCCCEEEEECHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNRRPIIDPEVLPVEGTGAGLPVIDSRLLTPSGLRERFARTLEWSVEPGEARLQEGVDPR
CCCCCCCCCCEEEECCCCCCCCHHCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHCCCCCC
SAAVLVPLVVRESGLTVLLTQRADHLNDHAGQISFPGGRREPFDRDATATALREAKEEIG
HHEEEEEEEECCCCCEEEEECCCHHCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHC
LDAERVEILGVLPDYLTGTGFCVTPVVGLVHPPFTVQADTFEVAEIFEVPLAFVMNPANH
CCHHHHHEEECCHHHHCCCCHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHEECCCCC
QVRVFRWEGGERRFFAMPYPNGEPDGHYFIWGATAAMFRNLYRFLAAG
EEEEEEEECCCEEEEECCCCCCCCCCCEEEEECHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA